miRNEST 2.0, an integrative microRNA resource :: BLAST
>51695_ptc-miR171l:pmrd
Length = 112
Score = 73.8 bits (37), Expect = 4e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 119 agacgagccgaatcaatatcactcttgtatgcttctt 155
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Sbjct: 75 agacgagccgaatcaatatcactcttgtatgcttctt 111
Score = 63.9 bits (32), Expect = 4e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 29 ggagaagtagacatggtgtgatattggttcggctcatctt 68
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Sbjct: 1 ggagaagtagacacggtgtgatattggtccggctcatctt 40
>54894_vvi-miR479:pmrd
Length = 94
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 119 agacgagccgaatcaatatcactcttgtatgcttc 153
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Sbjct: 60 agacgagccgaaccaatatcactcttgtatgcttc 94
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 35 gtagacatggtgtgatattggttcggctcatctt 68
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Sbjct: 1 gtagacatggtgtggtattggttcggctcatctt 34
>51697_ptc-miR171n:pmrd
Length = 101
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 119 agacgagccgaatcaatatcactcttgtatgcttc 153
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Sbjct: 67 agacgagccgaatcaatatcactcttgtacgcttc 101
>51696_ptc-miR171m:pmrd
Length = 101
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 119 agacgagccgaatcaatatcactcttgtatgcttc 153
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Sbjct: 67 agacgagccgaatcaatatcactcttgtacgcttc 101
>48568_gma-miR171b:pmrd
Length = 92
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 119 agacgagccgaatcaatatcactcttgtatgctt 152
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Sbjct: 59 agacgagccgaatcaatatcactcttgtttgctt 92
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 36 tagacatggtgtgatattggttcggctcatcttaatt 72
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Sbjct: 1 tagacacggcgtgatattggtacggctcatcttaatt 37
>48721_mtr-miR171b:pmrd
Length = 135
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 121 acgagccgaatcaatatcactcttgtatgcttc 153
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Sbjct: 1 acgagccgaatcaatatcactcttgtttgcttc 33
>46854_ach-miR171:pmrd
Length = 123
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 122 cgagccgaatcaatatcactcttgtat 148
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Sbjct: 89 cgagccgaatcaatatcactcttgtat 115
>51798_ptc-miR479:pmrd
Length = 85
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 119 agacgagccgaatcaatatcactct 143
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Sbjct: 61 agacgagccgaatcaatatcactct 85
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 43 ggtgtgatattggttcggctcatctt 68
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Sbjct: 1 ggtgtgatattggtccggctcatctt 26
>54457_sbi-miR171f:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 46 gtgatattggttcggctcatc 66
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Sbjct: 99 gtgatattggttcggctcatc 79
>55038_zma-miR171k:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 123 gagccgaatcaatatcactcttgtatgcttctttct 158
|||||||| ||||||||||| ||||| |||| ||||
Sbjct: 67 gagccgaaccaatatcactcatgtattcttcattct 102
>54456_sbi-miR171e:pmrd
Length = 124
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 123 gagccgaatcaatatcactcttgtatgcttctttct 158
|||||||| ||||||||||| ||||| |||| ||||
Sbjct: 87 gagccgaaccaatatcactcatgtattcttcattct 122
