miRNEST 2.0, an integrative microRNA resource :: BLAST
>53841_ptc-miRf12019-akr:pmrd
Length = 98
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 5 gcaactagaggataaatccaaagggatcgcattgatcc 42
|||||||||||| |||||||||||||||||||||||
Sbjct: 1 gcaactagaggaggcatccaaagggatcgcattgatcc 38
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 86 atgctatccctctggattcctcctt 110
||||||||||| |||||||||||||
Sbjct: 67 atgctatccctttggattcctcctt 91
>51972_ptc-miRf10150-akr:pmrd
Length = 98
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 5 gcaactagaggataaatccaaagggatcgcattgatcc 42
|||||||||||| |||||||||||||||||||||||
Sbjct: 98 gcaactagaggaggcatccaaagggatcgcattgatcc 61
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 86 atgctatccctctggattcctcctt 110
||||||||||| |||||||||||||
Sbjct: 32 atgctatccctttggattcctcctt 8
>51950_ptc-miRf10128-akr:pmrd
Length = 99
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 5 gcaactagaggataaatccaaagggatcgcattgatcc 42
|||||||||||| |||||||||||||||||||||||
Sbjct: 1 gcaactagaggaggcatccaaagggatcgcattgatcc 38
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 86 atgctatccctctggattcctcctt 110
||||||||||| |||||||||||||
Sbjct: 68 atgctatccctttggattcctcctt 92
>48730_mtr-miR393:pmrd
Length = 135
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 3 ctgcaactagaggataaatccaaagggatcgcattgatccta 44
|||||||| ||||| |||||||||||||||||||||||||
Sbjct: 3 ctgcaacttgaggaggcatccaaagggatcgcattgatccta 44
>47287_ath-miRf10187-akr:pmrd
Length = 162
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 atccaaagggatcgcattgatcctaa 45
||||||||||||||||||||||||||
Sbjct: 11 atccaaagggatcgcattgatcctaa 36
>47214_ath-miRf10114-akr:pmrd
Length = 131
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 atccaaagggatcgcattgatcctaa 45
||||||||||||||||||||||||||
Sbjct: 9 atccaaagggatcgcattgatcctaa 34
>46999_ath-miR393b:pmrd
Length = 160
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 atccaaagggatcgcattgatcctaa 45
||||||||||||||||||||||||||
Sbjct: 10 atccaaagggatcgcattgatcctaa 35
>46998_ath-miR393a:pmrd
Length = 133
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 atccaaagggatcgcattgatcctaa 45
||||||||||||||||||||||||||
Sbjct: 10 atccaaagggatcgcattgatcctaa 35
>48373_bna-miR393:pmrd
Length = 127
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatcctaa 45
|||||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatcctaa 25
>48917_osa-miR393:pmrd
Length = 115
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 atccaaagggatcgcattgatcct 43
||||||||||||||||||||||||
Sbjct: 10 atccaaagggatcgcattgatcct 33
>54850_vvi-miR393b:pmrd
Length = 83
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 atccaaagggatcgcattgatcc 42
|||||||||||||||||||||||
Sbjct: 10 atccaaagggatcgcattgatcc 32
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 86 atgctatccctctggattcctcctt 110
||||||||||| |||||||||||||
Sbjct: 56 atgctatccctttggattcctcctt 80
>54470_sbi-miR393:pmrd
Length = 139
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 atccaaagggatcgcattgatcc 42
|||||||||||||||||||||||
Sbjct: 20 atccaaagggatcgcattgatcc 42
>53840_ptc-miRf12018-akr:pmrd
Length = 92
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 atccaaagggatcgcattgatcc 42
|||||||||||||||||||||||
Sbjct: 13 atccaaagggatcgcattgatcc 35
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 86 atgctatccctctggattcctcctt 110
||||||||||| |||||||||||||
Sbjct: 64 atgctatccctttggattcctcctt 88
>52949_ptc-miRf11127-akr:pmrd
Length = 93
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 atccaaagggatcgcattgatcc 42
|||||||||||||||||||||||
Sbjct: 13 atccaaagggatcgcattgatcc 35
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 86 atgctatccctctggattcctcctt 110
||||||||||| |||||||||||||
Sbjct: 65 atgctatccctttggattcctcctt 89
>52948_ptc-miRf11126-akr:pmrd
Length = 93
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 atccaaagggatcgcattgatcc 42
|||||||||||||||||||||||
Sbjct: 13 atccaaagggatcgcattgatcc 35
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 86 atgctatccctctggattcctcctt 110
||||||||||| |||||||||||||
Sbjct: 65 atgctatccctttggattcctcctt 89
>52374_ptc-miRf10552-akr:pmrd
Length = 92
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 atccaaagggatcgcattgatcc 42
|||||||||||||||||||||||
Sbjct: 13 atccaaagggatcgcattgatcc 35
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 86 atgctatccctctggattcctcctt 110
||||||||||| |||||||||||||
Sbjct: 64 atgctatccctttggattcctcctt 88
>51721_ptc-miR393b:pmrd
Length = 84
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 atccaaagggatcgcattgatcc 42
|||||||||||||||||||||||
Sbjct: 10 atccaaagggatcgcattgatcc 32
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 86 atgctatccctctggattcctcct 109
||||||||||| ||||||||||||
Sbjct: 61 atgctatccctttggattcctcct 84
>51720_ptc-miR393a:pmrd
Length = 85
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 atccaaagggatcgcattgatcc 42
|||||||||||||||||||||||
Sbjct: 10 atccaaagggatcgcattgatcc 32
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 86 atgctatccctctggattcctcct 109
||||||||||| ||||||||||||
Sbjct: 62 atgctatccctttggattcctcct 85
>48731_mtr-miR393b:pmrd
Length = 119
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 atccaaagggatcgcattgatcc 42
|||||||||||||||||||||||
Sbjct: 5 atccaaagggatcgcattgatcc 27
>48576_gma-miR393:pmrd
Length = 120
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 atccaaagggatcgcattgatcc 42
|||||||||||||||||||||||
Sbjct: 10 atccaaagggatcgcattgatcc 32
>55062_zma-miR393f:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatcc 42
||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatcc 22
>55057_zma-miR393a:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatcc 42
||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatcc 22
>54849_vvi-miR393a:pmrd
Length = 126
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatcc 42
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32
>55063_zma-miR393g:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>55061_zma-miR393e:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 87 tccaaagggatcgcattgatc 67
>55060_zma-miR393d:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 89 tccaaagggatcgcattgatc 69
>55059_zma-miR393c:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 3 tccaaagggatcgcattgatc 23
>55058_zma-miR393b:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 3 tccaaagggatcgcattgatc 23
>55056_zma-miR393:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>51723_ptc-miR393d:pmrd
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>51722_ptc-miR393c:pmrd
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>48919_osa-miR393b:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatc 47
>48918_osa-miR393b:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatc 47
>48501_ghr-miR393:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
