miRNEST 2.0, an integrative microRNA resource :: BLAST
>55073_zma-miR396b:pmrd
Length = 136
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 10 tctttgtgatcttccacagctttcttgaactg 41
||||||||||||||||||||||||||||||||
Sbjct: 10 tctttgtgatcttccacagctttcttgaactg 41
>54645_sof-miR396:pmrd
Length = 134
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 10 tctttgtgatcttccacagctttcttgaactg 41
||||||||||||||||||||||||||||||||
Sbjct: 10 tctttgtgatcttccacagctttcttgaactg 41
>54486_sbi-miR396b:pmrd
Length = 128
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 10 tctttgtgatcttccacagctttcttgaactg 41
||||||||||||||||||||||||||||||||
Sbjct: 10 tctttgtgatcttccacagctttcttgaactg 41
>48945_osa-miR396a:pmrd
Length = 154
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 11 ctttgtgatcttccacagctttcttgaactg 41
|||||||||||||||||||||||||||||||
Sbjct: 1 ctttgtgatcttccacagctttcttgaactg 31
>54870_vvi-miR396c:pmrd
Length = 108
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 14 tgtgatcttccacagctttcttgaactgt 42
|||||||||||||||||||||||||||||
Sbjct: 4 tgtgatcttccacagctttcttgaactgt 32
>48680_lja-miR396:pmrd
Length = 108
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 6 gtcctctttgtgatcttccacagctttcttgaactg 41
||||||||||| |||||||||||||||||||||||
Sbjct: 1 gtcctctttgtattcttccacagctttcttgaactg 36
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaactactaagagga 121
|||||||||||||||||| | ||| |||||||
Sbjct: 33 ttcaagaaagctgtggaagaatacaaagagga 2
>48946_osa-miR396b:pmrd
Length = 116
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 ctttgtgatcttccacagctttcttgaactg 41
||||||| |||||||||||||||||||||||
Sbjct: 1 ctttgtggtcttccacagctttcttgaactg 31
>48578_gma-miR396a:pmrd
Length = 140
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 9 ctctttgtgatcttccacagctttcttgaactg 41
|||||||| |||||||||||||||||||||||
Sbjct: 9 ctctttgtattcttccacagctttcttgaactg 41
>55079_zma-miR396h:pmrd
Length = 116
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 atcttccacagctttcttgaactg 41
||||||||||||||||||||||||
Sbjct: 1 atcttccacagctttcttgaactg 24
>55074_zma-miR396c:pmrd
Length = 104
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tcttccacagctttcttgaactg 41
|||||||||||||||||||||||
Sbjct: 2 tcttccacagctttcttgaactg 24
>55072_zma-miR396a:pmrd
Length = 137
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tcttccacagctttcttgaactg 41
|||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaactg 41
>54871_vvi-miR396d:pmrd
Length = 120
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tcttccacagctttcttgaactg 41
|||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactg 31
>54485_sbi-miR396a:pmrd
Length = 125
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tcttccacagctttcttgaactg 41
|||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaactg 41
>52079_ptc-miRf10257-akr:pmrd
Length = 130
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tcttccacagctttcttgaactg 41
|||||||||||||||||||||||
Sbjct: 7 tcttccacagctttcttgaactg 29
>51735_ptc-miR396b:pmrd
Length = 132
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tcttccacagctttcttgaactg 41
|||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactg 31
>51734_ptc-miR396a:pmrd
Length = 123
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tcttccacagctttcttgaactg 41
|||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactg 31
>48110_ath-miRf11010-akr:pmrd
Length = 165
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tcttccacagctttcttgaactg 41
|||||||||||||||||||||||
Sbjct: 16 tcttccacagctttcttgaactg 38
>47008_ath-miR396a:pmrd
Length = 151
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tcttccacagctttcttgaactg 41
|||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactg 31
>55083_zma-miR396l:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaactg 41
|||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactg 21
>55082_zma-miR396k:pmrd
Length = 98
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaactg 41
|||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactg 21
>55081_zma-miR396j:pmrd
Length = 98
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaactg 41
|||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactg 21
>55080_zma-miR396i:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaactg 41
|||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactg 21
>48508_ghr-miR396c:pmrd
Length = 115
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaactg 41
|||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactg 21
>48507_ghr-miR396b:pmrd
Length = 115
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaactg 41
|||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactg 21
>48485_gcl-miR396a:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 21 ttccacagctttcttgaactg 41
|||||||||||||||||||||
Sbjct: 101 ttccacagctttcttgaactg 81
>48374_bna-miR396a:pmrd
Length = 117
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaactgtctt 45
|||||||||||||||||||| ||||
Sbjct: 1 ttccacagctttcttgaactttctt 25
>47009_ath-miR396b:pmrd
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaactgtctt 45
|||||||||||||||||||| ||||
Sbjct: 11 ttccacagctttcttgaactttctt 35
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 28 ttcaagaaagctgtggaaaa 9
>46887_aqc-miR396a:pmrd
Length = 122
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaactg 41
|||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactg 21
>55078_zma-miR396g:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 3 ttccacagctttcttgaact 22
>55077_zma-miR396f:pmrd
Length = 166
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 3 ttccacagctttcttgaact 22
>54869_vvi-miR396b:pmrd
Length = 108
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 31 ttcaagaaagctgtggaaaa 12
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>54868_vvi-miR396a:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 31 ttcaagaaagctgtggaaaa 12
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>54487_sbi-miR396c:pmrd
Length = 162
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>53179_ptc-miRf11357-akr:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 134 ttccacagctttcttgaact 115
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 117 ttcaagaaagctgtggaaaa 136
>52893_ptc-miRf11071-akr:pmrd
Length = 148
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 142 ttccacagctttcttgaact 123
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 125 ttcaagaaagctgtggaaaa 144
>52304_ptc-miRf10482-akr:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 93 ttccacagctttcttgaact 74
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 76 ttcaagaaagctgtggaaaa 95
>52080_ptc-miRf10258-akr:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 134 ttccacagctttcttgaact 115
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 117 ttcaagaaagctgtggaaaa 136
>51739_ptc-miR396f:pmrd
Length = 127
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 15 gtgatcttccacagctttcttgaactgt 42
||||| |||||| |||||||||||||||
Sbjct: 5 gtgattttccacggctttcttgaactgt 32
>51738_ptc-miR396e:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 28 ttcaagaaagctgtggaaaa 9
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>51737_ptc-miR396d:pmrd
Length = 154
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 28 ttcaagaaagctgtggaaaa 9
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>51736_ptc-miR396c:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 28 ttcaagaaagctgtggaaaa 9
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>51564_pta-miR396:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 34 ttcaagaaagctgtggaaaa 15
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 17 ttccacagctttcttgaact 36
>48947_osa-miR396c:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>48748_mtr-miR396a:pmrd
Length = 93
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 23 ttcaagaaagctgtggaaaa 4
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>48580_gma-miR396c:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 38 ttcaagaaagctgtggaaaa 19
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>48579_gma-miR396b:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 38 ttcaagaaagctgtggaaaa 19
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>46888_aqc-miR396b:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
