miRNEST 2.0, an integrative microRNA resource :: BLAST
>48088_ath-miRf10988-akr:pmrd
Length = 129
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 118 aatgacctgccaaaggagagttgccct 144
|||||||||||||||||||||||||||
Sbjct: 95 aatgacctgccaaaggagagttgccct 121
>47473_ath-miRf10373-akr:pmrd
Length = 125
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 118 aatgacctgccaaaggagagttgccct 144
|||||||||||||||||||||||||||
Sbjct: 93 aatgacctgccaaaggagagttgccct 119
>47472_ath-miRf10372-akr:pmrd
Length = 131
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 118 aatgacctgccaaaggagagttgccct 144
|||||||||||||||||||||||||||
Sbjct: 96 aatgacctgccaaaggagagttgccct 122
>47016_ath-miR399b:pmrd
Length = 135
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 118 aatgacctgccaaaggagagttgccct 144
|||||||||||||||||||||||||||
Sbjct: 98 aatgacctgccaaaggagagttgccct 124
>54885_vvi-miR399i:pmrd
Length = 122
Score = 50.1 bits (25), Expect = 5e-07
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 17 tagttgtagggcttctctcctt-tggcaggtgatggc 52
|||||||||||||||||||||| ||||||| ||||||
Sbjct: 3 tagttgtagggcttctctccttctggcaggagatggc 39
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 117 caatgacctgccaaaggagagttgccct 144
|||||||| |||||||||||||||||||
Sbjct: 84 caatgacccgccaaaggagagttgccct 111
>54878_vvi-miR399b:pmrd
Length = 117
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 120 tgacctgccaaaggagagttgccctataactgcttc 155
|||| |||||||||||||||||||| | ||||||||
Sbjct: 82 tgacttgccaaaggagagttgccctgtgactgcttc 117
>48973_osa-miR399j:pmrd
Length = 106
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 124 ctgccaaaggagagttgccctataactg 151
|||||||||||||||||||||| |||||
Sbjct: 75 ctgccaaaggagagttgccctaaaactg 102
>54879_vvi-miR399c:pmrd
Length = 82
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 118 aatgacctgccaaaggagagttgccct 144
||||| |||||||||||||||||||||
Sbjct: 45 aatgatctgccaaaggagagttgccct 71
>51755_ptc-miR399i:pmrd
Length = 108
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 125 tgccaaaggagagttgccctataactg 151
|||||||||||||||||||||| ||||
Sbjct: 79 tgccaaaggagagttgccctatgactg 105
>47017_ath-miR399c:pmrd
Length = 114
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 125 tgccaaaggagagttgccctataactgcttc 155
|||||||||||||||||||| | ||||||||
Sbjct: 84 tgccaaaggagagttgccctgtcactgcttc 114
>46891_aqc-miR399:pmrd
Length = 98
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 124 ctgccaaaggagagttgccctat 146
|||||||||||||||||||||||
Sbjct: 71 ctgccaaaggagagttgccctat 93
>55095_zma-miR399e:pmrd
Length = 124
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 124 ctgccaaaggagagttgccctataac 149
||||||||||||||||||||| ||||
Sbjct: 84 ctgccaaaggagagttgccctgtaac 109
>54497_sbi-miR399i:pmrd
Length = 121
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 124 ctgccaaaggagagttgccctataac 149
||||||||||||||||||||| ||||
Sbjct: 81 ctgccaaaggagagttgccctgtaac 106
>54492_sbi-miR399d:pmrd
Length = 205
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 123 cctgccaaaggagagttgccct 144
||||||||||||||||||||||
Sbjct: 164 cctgccaaaggagagttgccct 185
>53699_ptc-miRf11877-akr:pmrd
Length = 102
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 26 ggcttctctcctttggcaggtgatgg 51
||||||||| ||||||||||||||||
Sbjct: 9 ggcttctcttctttggcaggtgatgg 34
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 126 gccaaaggagagttgccctataact 150
||||||||||||||||||| |||||
Sbjct: 78 gccaaaggagagttgccctctaact 102
>51758_ptc-miR399l:pmrd
Length = 109
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 26 ggcttctctcctttggcaggtgatgg 51
||||||||| ||||||||||||||||
Sbjct: 13 ggcttctcttctttggcaggtgatgg 38
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 126 gccaaaggagagttgccctataact 150
||||||||||||||||||| |||||
Sbjct: 82 gccaaaggagagttgccctctaact 106
>48967_osa-miR399d:pmrd
Length = 286
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 123 cctgccaaaggagagttgccct 144
||||||||||||||||||||||
Sbjct: 254 cctgccaaaggagagttgccct 275
>55098_zma-miR399h:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 124 ctgccaaaggagagttgccct 144
|||||||||||||||||||||
Sbjct: 64 ctgccaaaggagagttgccct 84
>54561_sly-miR399:pmrd
Length = 71
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 125 tgccaaaggagagttgcccta 145
|||||||||||||||||||||
Sbjct: 51 tgccaaaggagagttgcccta 71
>54381_pvu-miR399a:pmrd
Length = 223
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 125 tgccaaaggagagttgccct 144
||||||||||||||||||||
Sbjct: 89 tgccaaaggagagttgccct 108
>51331_peu-miR2915:pmrd
Length = 105
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 66 catataatatatatttatat 85
||||||||||||||||||||
Sbjct: 63 catataatatatatttatat 44
>48756_mtr-miR399g:pmrd
Length = 74
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 125 tgccaaaggagagttgccct 144
||||||||||||||||||||
Sbjct: 54 tgccaaaggagagttgccct 73
