miRNEST 2.0, an integrative microRNA resource :: BLAST
>55091_zma-miR399a:pmrd
Length = 123
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 108 ttgccaaaggagaattgccctgccattcac 137
||||||||||||||||||||||||||||||
Sbjct: 83 ttgccaaaggagaattgccctgccattcac 112
>54884_vvi-miR399h:pmrd
Length = 90
Score = 60.0 bits (30), Expect = 5e-10
Identities = 40/42 (95%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 95 tgcatccttctgttt-gccaaaggagaattgccctgccattc 135
||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 45 tgcatacttctgttttgccaaaggagaattgccctgccattc 86
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 26 aggaataacagtgcagtcctcctttggc 53
||||||||||||||| ||||||||||||
Sbjct: 1 aggaataacagtgcaatcctcctttggc 28
>52804_ptc-miRf10982-akr:pmrd
Length = 94
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 107 tttgccaaaggagaattgccctgccattc 135
|||||||||||||||||||||||||||||
Sbjct: 29 tttgccaaaggagaattgccctgccattc 1
>51752_ptc-miR399f:pmrd
Length = 101
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 107 tttgccaaaggagaattgccctgccattc 135
|||||||||||||||||||||||||||||
Sbjct: 70 tttgccaaaggagaattgccctgccattc 98
>53710_ptc-miRf11888-akr:pmrd
Length = 89
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 109 tgccaaaggagaattgccctgccattca 136
||||||||||||||||||||||||||||
Sbjct: 28 tgccaaaggagaattgccctgccattca 1
>51753_ptc-miR399g:pmrd
Length = 94
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 109 tgccaaaggagaattgccctgccattca 136
||||||||||||||||||||||||||||
Sbjct: 65 tgccaaaggagaattgccctgccattca 92
>48965_osa-miR399b:pmrd
Length = 97
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 109 tgccaaaggagaattgccctgccattca 136
||||||||||||||||||||||||||||
Sbjct: 67 tgccaaaggagaattgccctgccattca 94
>54496_sbi-miR399h:pmrd
Length = 132
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 109 tgccaaaggagaattgccctgccattc 135
|||||||||||||||||||||||||||
Sbjct: 93 tgccaaaggagaattgccctgccattc 119
>50193_osa-miRf10978-akr:pmrd
Length = 105
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 109 tgccaaaggagaattgccctgccattc 135
|||||||||||||||||||||||||||
Sbjct: 79 tgccaaaggagaattgccctgccattc 105
>48966_osa-miR399c:pmrd
Length = 110
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 109 tgccaaaggagaattgccctgccattcac 137
|||||||||||||||||||||| ||||||
Sbjct: 80 tgccaaaggagaattgccctgcgattcac 108
>48752_mtr-miR399c:pmrd
Length = 119
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 106 gtttgccaaaggagaattgccctgccatt 134
||||||||||||||| |||||||||||||
Sbjct: 77 gtttgccaaaggagatttgccctgccatt 105
>54498_sbi-miR399j:pmrd
Length = 93
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 108 ttgccaaaggagaattgccctgcc 131
||||||||||||||||||||||||
Sbjct: 70 ttgccaaaggagaattgccctgcc 93
>55093_zma-miR399c:pmrd
Length = 207
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 109 tgccaaaggagaattgccctgccattc 135
|||||||||||||||||||||| ||||
Sbjct: 168 tgccaaaggagaattgccctgcgattc 194
>54491_sbi-miR399c:pmrd
Length = 130
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 109 tgccaaaggagaattgccctgccattc 135
|||||||||||||||||||||| ||||
Sbjct: 91 tgccaaaggagaattgccctgcgattc 117
>54489_sbi-miR399a:pmrd
Length = 137
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 109 tgccaaaggagaattgccctgccattc 135
|||||||||||||||||||||| ||||
Sbjct: 98 tgccaaaggagaattgccctgcgattc 124
>55102_zma-miR399l:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 108 ttgccaaaggagaattgccctg 129
||||||||||||||||||||||
Sbjct: 64 ttgccaaaggagaattgccctg 85
>48964_osa-miR399a:pmrd
Length = 149
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 109 tgccaaaggagaattgccctgc 130
||||||||||||||||||||||
Sbjct: 119 tgccaaaggagaattgccctgc 140
>55101_zma-miR399k:pmrd
Length = 168
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 109 tgccaaaggagaattgccctg 129
|||||||||||||||||||||
Sbjct: 148 tgccaaaggagaattgccctg 168
>54877_vvi-miR399a:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 109 tgccaaaggagaattgccctg 129
|||||||||||||||||||||
Sbjct: 67 tgccaaaggagaattgccctg 87
>54490_sbi-miR399b:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 109 tgccaaaggagaattgccctgccattca 136
|||||||||||| ||||||||||||||
Sbjct: 84 tgccaaaggagagctgccctgccattca 111
>48972_osa-miR399i:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 109 tgccaaaggagaattgccctgccattca 136
|||||||||||| ||||||||||||||
Sbjct: 86 tgccaaaggagagctgccctgccattca 113
>48316_bdi-miR399:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 109 tgccaaaggagaattgccctgcca 132
||||||||||||||| ||||||||
Sbjct: 73 tgccaaaggagaattaccctgcca 96
