miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51655_ptc-miR169ac:pmrd
Length = 107
Score = 212 bits (107), Expect = 4e-56
Identities = 107/107 (100%)
Strand = Plus / Plus
Query: 1 tcttgtttgtagccaaggacgacttgcccacaatatgtatcgtgagcgtttccaatttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcttgtttgtagccaaggacgacttgcccacaatatgtatcgtgagcgtttccaatttgc 60
Query: 61 aacctcatacttggtttgttttgggcagtctccttggctatgcagat 107
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aacctcatacttggtttgttttgggcagtctccttggctatgcagat 107
>51906_ptc-miRf10084-akr:pmrd
Length = 103
Score = 204 bits (103), Expect = 9e-54
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 5 gtttgtagccaaggacgacttgcccacaatatgtatcgtgagcgtttccaatttgcaacc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttgtagccaaggacgacttgcccacaatatgtatcgtgagcgtttccaatttgcaacc 60
Query: 65 tcatacttggtttgttttgggcagtctccttggctatgcagat 107
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcatacttggtttgttttgggcagtctccttggctatgcagat 103
>51656_ptc-miR169ad:pmrd
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 9 gtagccaaggacgacttgcccacaatatg 37
|||||||||||||||||||||||| ||||
Sbjct: 9 gtagccaaggacgacttgcccacactatg 37
>53831_ptc-miRf12009-akr:pmrd
Length = 138
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 gtagccaaggacgacttgcccac 31
|||||||||||||||||||||||
Sbjct: 23 gtagccaaggacgacttgcccac 45
>53746_ptc-miRf11924-akr:pmrd
Length = 138
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 gtagccaaggacgacttgcccac 31
|||||||||||||||||||||||
Sbjct: 23 gtagccaaggacgacttgcccac 45
>51658_ptc-miR169af:pmrd
Length = 107
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 gtagccaaggacgacttgcccac 31
|||||||||||||||||||||||
Sbjct: 9 gtagccaaggacgacttgcccac 31
>51657_ptc-miR169ae:pmrd
Length = 107
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 gtagccaaggacgacttgcccac 31
|||||||||||||||||||||||
Sbjct: 9 gtagccaaggacgacttgcccac 31
>51654_ptc-miR169ab:pmrd
Length = 107
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 gtagccaaggacgacttgcccac 31
|||||||||||||||||||||||
Sbjct: 9 gtagccaaggacgacttgcccac 31
>51678_ptc-miR169u:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 gtagccaaggacgacttgcc 28
||||||||||||||||||||
Sbjct: 10 gtagccaaggacgacttgcc 29
