miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51673_ptc-miR169p:pmrd
Length = 104
Score = 206 bits (104), Expect = 2e-54
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 1 ccttgcgtggaagccaaggatgacttgcctgagaattttaggaaggtttctatatgaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccttgcgtggaagccaaggatgacttgcctgagaattttaggaaggtttctatatgaaag 60
Query: 61 ctttttattagttttgcaggaagtcaaccttggctttcctatag 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctttttattagttttgcaggaagtcaaccttggctttcctatag 104
>51672_ptc-miR169o:pmrd
Length = 104
Score = 206 bits (104), Expect = 2e-54
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 1 ccttgcgtggaagccaaggatgacttgcctgagaattttaggaaggtttctatatgaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccttgcgtggaagccaaggatgacttgcctgagaattttaggaaggtttctatatgaaag 60
Query: 61 ctttttattagttttgcaggaagtcaaccttggctttcctatag 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctttttattagttttgcaggaagtcaaccttggctttcctatag 104
>47103_ath-miRf10003-akr:pmrd
Length = 141
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 2 cttgcgtggaagccaaggatgacttgcctg 31
|||| |||| ||||||||||||||||||||
Sbjct: 130 cttgtgtggtagccaaggatgacttgcctg 101
>46968_ath-miR169h:pmrd
Length = 190
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 2 cttgcgtggaagccaaggatgacttgcctg 31
|||| |||| ||||||||||||||||||||
Sbjct: 37 cttgtgtggtagccaaggatgacttgcctg 66
>48360_bna-miR169k:pmrd
Length = 155
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 gtggaagccaaggatgacttgcctg 31
|||| ||||||||||||||||||||
Sbjct: 30 gtggtagccaaggatgacttgcctg 54
>48357_bna-miR169h:pmrd
Length = 176
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 gtggaagccaaggatgacttgcctg 31
|||| ||||||||||||||||||||
Sbjct: 33 gtggtagccaaggatgacttgcctg 57
>48356_bna-miR169g:pmrd
Length = 168
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 gtggaagccaaggatgacttgcctg 31
|||| ||||||||||||||||||||
Sbjct: 33 gtggtagccaaggatgacttgcctg 57
>46974_ath-miR169n:pmrd
Length = 215
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctga 32
|||||||||||||||||||||
Sbjct: 46 agccaaggatgacttgcctga 66
>46972_ath-miR169l:pmrd
Length = 211
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctga 32
|||||||||||||||||||||
Sbjct: 45 agccaaggatgacttgcctga 65
>46970_ath-miR169j:pmrd
Length = 221
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctga 32
|||||||||||||||||||||
Sbjct: 52 agccaaggatgacttgcctga 72
>46969_ath-miR169i:pmrd
Length = 206
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctga 32
|||||||||||||||||||||
Sbjct: 41 agccaaggatgacttgcctga 61
>55013_zma-miR169k:pmrd
Length = 133
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgcctg 41
>55012_zma-miR169j:pmrd
Length = 151
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgcctg 41
>55011_zma-miR169i:pmrd
Length = 191
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgcctg 41
>54807_vvi-miR169e:pmrd
Length = 149
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 13 agccaaggatgacttgcctg 32
>54548_sly-miR169b:pmrd
Length = 205
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 172 agccaaggatgacttgcctg 191
>54448_sbi-miR169l:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 93 agccaaggatgacttgcctg 74
>54444_sbi-miR169h:pmrd
Length = 155
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgcctg 41
>54443_sbi-miR169g:pmrd
Length = 152
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgcctg 41
>54442_sbi-miR169f:pmrd
Length = 148
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgcctg 41
>54441_sbi-miR169e:pmrd
Length = 240
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgcctg 41
>52726_ptc-miRf10904-akr:pmrd
Length = 132
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 16 agccaaggatgacttgcctg 35
>51670_ptc-miR169m:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctg 31
>51669_ptc-miR169l:pmrd
Length = 143
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctg 31
>51668_ptc-miR169k:pmrd
Length = 203
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctg 31
>51667_ptc-miR169j:pmrd
Length = 137
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctg 31
>51666_ptc-miR169i:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctg 31
>48892_osa-miR169q:pmrd
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 97 agccaaggatgacttgcctg 78
>48888_osa-miR169m:pmrd
Length = 138
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctg 31
>48887_osa-miR169l:pmrd
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctg 31
>48886_osa-miR169k:pmrd
Length = 156
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctg 31
>48885_osa-miR169j:pmrd
Length = 125
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctg 31
>48884_osa-miR169i:pmrd
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctg 31
>48883_osa-miR169h:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctg 31
>48563_gma-miR169c:pmrd
Length = 115
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 gaagccaaggatgacttgcc 29
||||||||||||||||||||
Sbjct: 10 gaagccaaggatgacttgcc 29
>48487_ghb-miR169a:pmrd
Length = 189
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 51 agccaaggatgacttgcctg 70
>48361_bna-miR169l:pmrd
Length = 199
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 26 agccaaggatgacttgcctg 45
>48359_bna-miR169j:pmrd
Length = 167
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 10 agccaaggatgacttgcctg 29
>48358_bna-miR169i:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 16 agccaaggatgacttgcctg 35
>46973_ath-miR169m:pmrd
Length = 212
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 43 agccaaggatgacttgcctg 62
>46971_ath-miR169k:pmrd
Length = 213
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 44 agccaaggatgacttgcctg 63
>46874_aqc-miR169b:pmrd
Length = 180
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgcctg 31
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgcctg 21
