miRNEST 2.0, an integrative microRNA resource :: BLAST
>50086_osa-miRf10871-akr:pmrd
Length = 142
Score = 87.7 bits (44), Expect = 3e-18
Identities = 107/128 (83%)
Strand = Plus / Minus
Query: 38 tatctcgaagtaccggtacctcacggtaccaaatcatctctgatcactagatatagctcg 97
|||||||| |||||||||||||| ||||||||||| | || |||| | ||| ||||| |
Sbjct: 136 tatctcgaggtaccggtacctcatggtaccaaatcgtttccgatcgttggatctagctag 77
Query: 98 gtaggataggtatcgtcaaatccaacaattagaaaagatttagtaccgtgaggtaccgat 157
||||||| | ||| || | || ||| |||||||| ||||| |||||||||||||||| |
Sbjct: 76 gtaggatggatattgttatattcaatgattagaaatgatttggtaccgtgaggtaccggt 17
Query: 158 acctcaag 165
||||||||
Sbjct: 16 acctcaag 9
Score = 58.0 bits (29), Expect = 3e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 47 gtaccggtacctcacggtaccaaatcatctctgatca 83
|||||||||||||||||||||||||||| ||| ||||
Sbjct: 15 gtaccggtacctcacggtaccaaatcatttctaatca 51
>50088_osa-miRf10873-akr:pmrd
Length = 125
Score = 81.8 bits (41), Expect = 2e-16
Identities = 104/125 (83%)
Strand = Plus / Minus
Query: 41 ctcgaagtaccggtacctcacggtaccaaatcatctctgatcactagatatagctcggta 100
||||| |||||||||||||| ||||||||||| | || |||| | ||| ||||| ||||
Sbjct: 125 ctcgaggtaccggtacctcatggtaccaaatcgtttccgatcgttggatctagctaggta 66
Query: 101 ggataggtatcgtcaaatccaacaattagaaaagatttagtaccgtgaggtaccgatacc 160
|||| | ||| || | || ||| |||||||| ||||| |||||||||||||||| ||||
Sbjct: 65 ggatggatattgttatattcaatgattagaaatgatttggtaccgtgaggtaccggtacc 6
Query: 161 tcaag 165
|||||
Sbjct: 5 tcaag 1
Score = 58.0 bits (29), Expect = 3e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 47 gtaccggtacctcacggtaccaaatcatctctgatca 83
|||||||||||||||||||||||||||| ||| ||||
Sbjct: 7 gtaccggtacctcacggtaccaaatcatttctaatca 43
>50087_osa-miRf10872-akr:pmrd
Length = 125
Score = 81.8 bits (41), Expect = 2e-16
Identities = 104/125 (83%)
Strand = Plus / Minus
Query: 41 ctcgaagtaccggtacctcacggtaccaaatcatctctgatcactagatatagctcggta 100
||||| |||||||||||||| ||||||||||| | || |||| | ||| ||||| ||||
Sbjct: 125 ctcgaggtaccggtacctcatggtaccaaatcgtttccgatcgttggatctagctaggta 66
Query: 101 ggataggtatcgtcaaatccaacaattagaaaagatttagtaccgtgaggtaccgatacc 160
|||| | ||| || | || ||| |||||||| ||||| |||||||||||||||| ||||
Sbjct: 65 ggatggatattgttatattcaatgattagaaatgatttggtaccgtgaggtaccggtacc 6
Query: 161 tcaag 165
|||||
Sbjct: 5 tcaag 1
Score = 58.0 bits (29), Expect = 3e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 47 gtaccggtacctcacggtaccaaatcatctctgatca 83
|||||||||||||||||||||||||||| ||| ||||
Sbjct: 7 gtaccggtacctcacggtaccaaatcatttctaatca 43
>50089_osa-miRf10874-akr:pmrd
Length = 123
Score = 77.8 bits (39), Expect = 3e-15
Identities = 102/123 (82%)
Strand = Plus / Minus
Query: 42 tcgaagtaccggtacctcacggtaccaaatcatctctgatcactagatatagctcggtag 101
|||| |||||||||||||| ||||||||||| | || |||| | ||| ||||| |||||
Sbjct: 123 tcgaggtaccggtacctcatggtaccaaatcgtttccgatcgttggatctagctaggtag 64
Query: 102 gataggtatcgtcaaatccaacaattagaaaagatttagtaccgtgaggtaccgatacct 161
||| | ||| || | || ||| |||||||| ||||| |||||||||||||||| |||||
Sbjct: 63 gatggatattgttatattcaatgattagaaatgatttggtaccgtgaggtaccggtacct 4
Query: 162 caa 164
|||
Sbjct: 3 caa 1
Score = 58.0 bits (29), Expect = 3e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 47 gtaccggtacctcacggtaccaaatcatctctgatca 83
|||||||||||||||||||||||||||| ||| ||||
Sbjct: 6 gtaccggtacctcacggtaccaaatcatttctaatca 42
>50224_osa-miRf11009-akr:pmrd
Length = 119
Score = 63.9 bits (32), Expect = 4e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 47 gtaccggtacctcacggtaccaaatcatctctgatc 82
|||||||||||||||||||||||||||| |||||||
Sbjct: 116 gtaccggtacctcacggtaccaaatcatttctgatc 81
Score = 52.0 bits (26), Expect = 2e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 117 atccaacaattagaaaagatttagtaccgtgaggtaccgatacctc 162
||||||| || ||||| ||||| |||||||||||||||| ||||||
Sbjct: 74 atccaacgatcagaaatgatttggtaccgtgaggtaccggtacctc 119
>50035_osa-miRf10820-akr:pmrd
Length = 133
Score = 61.9 bits (31), Expect = 2e-10
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 140 gtaccgtgaggtaccgatacctcaagatattttttatttgatcggagcaaatctc 194
||||| |||||||| | |||||| |||||||||||||| || |||||||||||||
Sbjct: 64 gtaccatgaggtactggtacctcgagatattttttattggaacggagcaaatctc 10
>50575_osa-miRf11360-akr:pmrd
Length = 118
Score = 60.0 bits (30), Expect = 7e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 38 tatctcgaagtaccggtacctcacggtaccaaat 71
||||||||| ||||||||||||||||||||||||
Sbjct: 8 tatctcgaaataccggtacctcacggtaccaaat 41
>50574_osa-miRf11359-akr:pmrd
Length = 124
Score = 60.0 bits (30), Expect = 7e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 38 tatctcgaagtaccggtacctcacggtaccaaat 71
||||||||| ||||||||||||||||||||||||
Sbjct: 114 tatctcgaaataccggtacctcacggtaccaaat 81
>50530_osa-miRf11315-akr:pmrd
Length = 97
Score = 60.0 bits (30), Expect = 7e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 39 atctcgaagtaccggtacctcacggtaccaaatc 72
||||||| ||||||||||||||||||||||||||
Sbjct: 1 atctcgaggtaccggtacctcacggtaccaaatc 34
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 134 gatttagtaccgtgaggtaccgatacctcaagat 167
||||| |||||||||||||||| |||||| ||||
Sbjct: 34 gatttggtaccgtgaggtaccggtacctcgagat 1
Score = 44.1 bits (22), Expect = 4e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 41 ctcgaagtaccggtacctcacggtaccaaatcatctctgatc 82
||||| ||||||||||| ||| |||||||||| | |||||||
Sbjct: 95 ctcgaggtaccggtaccccacagtaccaaatcgtttctgatc 54
>50916_osa-miRf11701-akr:pmrd
Length = 132
Score = 56.0 bits (28), Expect = 1e-08
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 135 atttagtaccgtgaggtaccgatacctcaagatatttttt 174
||||||||||||||||||||| |||||| | |||||||||
Sbjct: 40 atttagtaccgtgaggtaccggtacctcgaaatatttttt 1
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 42 tcgaagtaccggtacctcacggtaccaaat 71
|||| |||||||||||||||||||| ||||
Sbjct: 11 tcgaggtaccggtacctcacggtactaaat 40
Score = 42.1 bits (21), Expect = 2e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 134 gatttagtaccgtgaggtaccgatacctcaagatatttttt 174
||||| ||| |||||| ||||| || |||||||||||||||
Sbjct: 92 gatttggtatcgtgagttaccggtagctcaagatatttttt 132
>50343_osa-miRf11128-akr:pmrd
Length = 104
Score = 56.0 bits (28), Expect = 1e-08
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 117 atccaacaattagaaaagatttagtaccgtgaggtaccgatacctcaagata 168
||||||| || | ||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 55 atccaacgatcaaaaacgatttggtaccgtgaggtaccgatacctcgagata 4
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 38 tatctcgaagtaccggtacctcacggtaccaaatc 72
|||||||| ||| ||||||||||||||||||||||
Sbjct: 4 tatctcgaggtatcggtacctcacggtaccaaatc 38
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 47 gtaccggtacctcacggtac 66
||||||||||||||||||||
Sbjct: 92 gtaccggtacctcacggtac 73
>51041_osa-miRf11826-akr:pmrd
Length = 112
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 38 tatctcgaagtaccggtacctcacggtaccaaatc 72
|||||||| ||||||||| ||||||||||||||||
Sbjct: 8 tatctcgaggtaccggtatctcacggtaccaaatc 42
>51040_osa-miRf11825-akr:pmrd
Length = 112
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 38 tatctcgaagtaccggtacctcacggtaccaaatc 72
|||||||| ||||||||| ||||||||||||||||
Sbjct: 105 tatctcgaggtaccggtatctcacggtaccaaatc 71
>51020_osa-miRf11805-akr:pmrd
Length = 125
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 128 agaaaagatttagtaccgtgaggtaccgatacctc 162
||||| ||||| |||||||||||||||||||||||
Sbjct: 88 agaaacgatttggtaccgtgaggtaccgatacctc 122
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 51 cggtacctcacggtaccaaatc 72
||||||||||||||||||||||
Sbjct: 115 cggtacctcacggtaccaaatc 94
>50422_osa-miRf11207-akr:pmrd
Length = 143
Score = 52.0 bits (26), Expect = 2e-07
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 128 agaaaagatttagtaccgtgaggtaccgatacctcaagatattttt 173
||||| |||||| ||||||||||||||| |||||| || |||||||
Sbjct: 47 agaaatgatttaataccgtgaggtaccggtacctcgaggtattttt 2
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 41 ctcgaagtaccggtacctcacggtaccaaatcat 74
||||| ||||||||||||||||||| |||||||
Sbjct: 10 ctcgaggtaccggtacctcacggtattaaatcat 43
>50344_osa-miRf11129-akr:pmrd
Length = 92
Score = 52.0 bits (26), Expect = 2e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 117 atccaacaattagaaaagatttagtaccgtgaggtaccgatacctc 162
||||||| || | ||| ||||| |||||||||||||||||||||||
Sbjct: 44 atccaacgatcaaaaacgatttggtaccgtgaggtaccgatacctc 89
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 41 ctcgaagtaccggtacctcacggtaccaaatc 72
||||| ||| ||||||||||||||||||||||
Sbjct: 92 ctcgaggtatcggtacctcacggtaccaaatc 61
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 gtaccggtacctcacggtac 66
||||||||||||||||||||
Sbjct: 7 gtaccggtacctcacggtac 26
>51206_osa-miRf11991-akr:pmrd
Length = 123
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 135 atttagtaccgtgaggtaccgatacctc 162
||||||||||||||||||||| ||||||
Sbjct: 94 atttagtaccgtgaggtaccggtacctc 121
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 42 tcgaagtaccggtacctcacggtaccaaat 71
|||| |||||||||||||||||||| ||||
Sbjct: 123 tcgaggtaccggtacctcacggtactaaat 94
Score = 42.1 bits (21), Expect = 2e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 42 tcgaagtaccggtacctcacggtaccaaatcatctctgatc 82
|||| ||||| ||||||||||||||||| || | |||||||
Sbjct: 1 tcgaggtaccagtacctcacggtaccaagtcgtttctgatc 41
>50917_osa-miRf11702-akr:pmrd
Length = 122
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 135 atttagtaccgtgaggtaccgatacctc 162
||||||||||||||||||||| ||||||
Sbjct: 35 atttagtaccgtgaggtaccggtacctc 8
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 42 tcgaagtaccggtacctcacggtaccaaat 71
|||| |||||||||||||||||||| ||||
Sbjct: 6 tcgaggtaccggtacctcacggtactaaat 35
>49418_osa-miRf10203-akr:pmrd
Length = 102
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 41 ctcgaagtaccggtacctcacggtaccaaatc 72
||||| ||||||||||| ||||||||||||||
Sbjct: 11 ctcgaggtaccggtaccccacggtaccaaatc 42
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 135 atttagtaccgtgaggtaccgatacctc 162
|||||||| |||||||||||||||||||
Sbjct: 62 atttagtaacgtgaggtaccgatacctc 89
>49417_osa-miRf10202-akr:pmrd
Length = 110
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 41 ctcgaagtaccggtacctcacggtaccaaatc 72
||||| ||||||||||| ||||||||||||||
Sbjct: 15 ctcgaggtaccggtaccccacggtaccaaatc 46
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 135 atttagtaccgtgaggtaccgatacctc 162
|||||||| |||||||||||||||||||
Sbjct: 66 atttagtaacgtgaggtaccgatacctc 93
>49899_osa-miRf10684-akr:pmrd
Length = 119
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 48 taccggtacctcacggtaccaaatcat 74
||||| |||||||||||||||||||||
Sbjct: 5 taccgatacctcacggtaccaaatcat 31
>50904_osa-miRf11689-akr:pmrd
Length = 105
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 129 gaaaagatttagtaccgtgaggtaccgatacctc 162
|||| |||||||||||||||||||| | ||||||
Sbjct: 66 gaaatgatttagtaccgtgaggtactggtacctc 99
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 42 tcgaagtaccggtacctcacggtaccaaatcat 74
|||| ||||| |||||||||||||| |||||||
Sbjct: 101 tcgaggtaccagtacctcacggtactaaatcat 69
>50903_osa-miRf11688-akr:pmrd
Length = 117
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 129 gaaaagatttagtaccgtgaggtaccgatacctc 162
|||| |||||||||||||||||||| | ||||||
Sbjct: 72 gaaatgatttagtaccgtgaggtactggtacctc 105
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 42 tcgaagtaccggtacctcacggtaccaaatcat 74
|||| ||||| |||||||||||||| |||||||
Sbjct: 107 tcgaggtaccagtacctcacggtactaaatcat 75
>50297_osa-miRf11082-akr:pmrd
Length = 119
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 47 gtaccggtacctcacggtaccaaatc 72
||||||||| ||||||||||||||||
Sbjct: 4 gtaccggtatctcacggtaccaaatc 29
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 48 taccggtacctcacggtaccaaatc 72
||||||||||||| |||||||||||
Sbjct: 115 taccggtacctcatggtaccaaatc 91
>50250_osa-miRf11035-akr:pmrd
Length = 144
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 38 tatctcgaagtaccggtacctcacggtacc 67
|||||||| |||||||||||||||| ||||
Sbjct: 137 tatctcgaggtaccggtacctcacgatacc 108
Score = 40.1 bits (20), Expect = 6e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 144 cgtgaggtaccgatacctcaagatatttttta 175
|||||||||||| |||||| ||||| ||||||
Sbjct: 113 cgtgaggtaccggtacctcgagatacttttta 144
>51187_osa-miRf11972-akr:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 52 ggtacctcacggtaccaaat 71
||||||||||||||||||||
Sbjct: 111 ggtacctcacggtaccaaat 92
