miRNEST 2.0, an integrative microRNA resource :: BLAST
>51609_ptc-miR160b:pmrd
Length = 98
Score = 129 bits (65), Expect = 6e-31
Identities = 83/89 (93%)
Strand = Plus / Plus
Query: 27 tatgtgcctggctccctgtatgccatttgcagagtcaatcgaaacatcgatggcctccgt 86
|||||||||||||||||||||||||||||||||| | | || | | ||||||||||||||
Sbjct: 7 tatgtgcctggctccctgtatgccatttgcagagcccaacggatcctcgatggcctccgt 66
Query: 87 ggatggcgtatgaggagccatgcatattc 115
|||||||||||||||||||||||||||||
Sbjct: 67 ggatggcgtatgaggagccatgcatattc 95
>51610_ptc-miR160c:pmrd
Length = 98
Score = 121 bits (61), Expect = 1e-28
Identities = 82/89 (92%)
Strand = Plus / Plus
Query: 27 tatgtgcctggctccctgtatgccatttgcagagtcaatcgaaacatcgatggcctccgt 86
|||||||||||||||||||||||||||||||||| | | || | ||||||||||||||
Sbjct: 7 tatgtgcctggctccctgtatgccatttgcagagcccaccggttcttcgatggcctccgt 66
Query: 87 ggatggcgtatgaggagccatgcatattc 115
|||||||||||||||||||||||||||||
Sbjct: 67 ggatggcgtatgaggagccatgcatattc 95
>54783_vvi-miR160f:pmrd
Length = 102
Score = 117 bits (59), Expect = 2e-27
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccatttgcagagtcaatcgaaacatcgatggcctccgtggat 90
|||||||||||||||||||||||||||||| | | || ||||||||||||| |||||||
Sbjct: 11 tgcctggctccctgtatgccatttgcagagcccaccggcacatcgatggccttcgtggat 70
Query: 91 ggcgtatgaggagccatgcatat 113
|||||||||||||||||||||||
Sbjct: 71 ggcgtatgaggagccatgcatat 93
>48542_gma-miR160a:pmrd
Length = 119
Score = 95.6 bits (48), Expect = 8e-21
Identities = 78/88 (88%)
Strand = Plus / Plus
Query: 27 tatgtgcctggctccctgtatgccatttgcagagtcaatcgaaacatcgatggcctccgt 86
||||||||||||||||||||||||||||| |||| |||||| |||| ||| ||| ||
Sbjct: 17 tatgtgcctggctccctgtatgccatttgtagagctcatcgaagcatcaatgacctttgt 76
Query: 87 ggatggcgtatgaggagccatgcatatt 114
|||||||||||||||||||| |||||||
Sbjct: 77 ggatggcgtatgaggagccaagcatatt 104
>47213_ath-miRf10113-akr:pmrd
Length = 85
Score = 93.7 bits (47), Expect = 3e-20
Identities = 75/83 (90%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccatttgcagagtcaatcgaaacatcgatggcctccgtggat 90
|||||||||||||||||||||| ||| ||| | ||||| ||||||| |||||||||||
Sbjct: 4 tgcctggctccctgtatgccatatgctgagcccatcgagt-atcgatgacctccgtggat 62
Query: 91 ggcgtatgaggagccatgcatat 113
|||||||||||||||||||||||
Sbjct: 63 ggcgtatgaggagccatgcatat 85
>46934_ath-miR160a:pmrd
Length = 85
Score = 93.7 bits (47), Expect = 3e-20
Identities = 75/83 (90%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccatttgcagagtcaatcgaaacatcgatggcctccgtggat 90
|||||||||||||||||||||| ||| ||| | ||||| ||||||| |||||||||||
Sbjct: 4 tgcctggctccctgtatgccatatgctgagcccatcgagt-atcgatgacctccgtggat 62
Query: 91 ggcgtatgaggagccatgcatat 113
|||||||||||||||||||||||
Sbjct: 63 ggcgtatgaggagccatgcatat 85
>48397_bra-miR160a:pmrd
Length = 127
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 75 gatggcctccgtggatggcgtatgaggagccatgcatatt 114
|||| |||||||| ||||||||||||||||||||||||||
Sbjct: 69 gatgacctccgtgaatggcgtatgaggagccatgcatatt 108
>48396_bra-miR160a:pmrd
Length = 127
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 75 gatggcctccgtggatggcgtatgaggagccatgcatatt 114
|||| |||||||| ||||||||||||||||||||||||||
Sbjct: 69 gatgacctccgtgaatggcgtatgaggagccatgcatatt 108
>48704_mtr-miR160e:pmrd
Length = 91
Score = 60.0 bits (30), Expect = 5e-10
Identities = 75/90 (83%)
Strand = Plus / Plus
Query: 27 tatgtgcctggctccctgtatgccatttgcagagtcaatcgaaacatcgatggcctccgt 86
|||||||||||||||||||||||||| | || || |||| ||| ||| ||| ||
Sbjct: 2 tatgtgcctggctccctgtatgccatatatgaagctcattgaaaaatcaatgacctttgt 61
Query: 87 ggatggcgtatgaggagccatgcatattcc 116
|||||||||||||||||||| |||||||||
Sbjct: 62 ggatggcgtatgaggagccaagcatattcc 91
>48703_mtr-miR160d:pmrd
Length = 91
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 29 tgtgcctggctccctgtatgccatttgcagagtc 62
||||||||||||||||||||||||||| ||||||
Sbjct: 4 tgtgcctggctccctgtatgccatttgtagagtc 37
>48702_mtr-miR160b:pmrd
Length = 91
Score = 60.0 bits (30), Expect = 5e-10
Identities = 75/90 (83%)
Strand = Plus / Plus
Query: 27 tatgtgcctggctccctgtatgccatttgcagagtcaatcgaaacatcgatggcctccgt 86
|||||||||||||||||||||||||| | || || |||| ||| ||| ||| ||
Sbjct: 2 tatgtgcctggctccctgtatgccatatatgaagctcattgaaaaatcaatgacctttgt 61
Query: 87 ggatggcgtatgaggagccatgcatattcc 116
|||||||||||||||||||| |||||||||
Sbjct: 62 ggatggcgtatgaggagccaagcatattcc 91
>54781_vvi-miR160d:pmrd
Length = 102
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccatttgcagagtc 62
||||||||||||||||||||||||||| ||||
Sbjct: 11 tgcctggctccctgtatgccatttgcaaagtc 42
>54541_sly-miR160a:pmrd
Length = 129
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccatttgca 57
|||||||||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgccatttgca 46
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 89 atggcgtatgaggagccatgcatattcc 116
|||||||||||||||||| |||||||||
Sbjct: 81 atggcgtatgaggagccaagcatattcc 108
>46865_aqc-miR160b:pmrd
Length = 82
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccatttgc 56
||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccatttgc 26
>51615_ptc-miR160h:pmrd
Length = 98
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 29 tgtgcctggctccctgtatgccatttgca 57
|||||||||||||||| ||||||||||||
Sbjct: 9 tgtgcctggctccctgcatgccatttgca 37
>54940_zma-miR160c:pmrd
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 28 atgtgcctggctccctgtatgcca 51
||||||||||||||||||||||||
Sbjct: 4 atgtgcctggctccctgtatgcca 27
>48828_osa-miR160c:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 28 atgtgcctggctccctgtatgcca 51
||||||||||||||||||||||||
Sbjct: 4 atgtgcctggctccctgtatgcca 27
>54939_zma-miR160b:pmrd
Length = 121
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 29 tgtgcctggctccctgtatgcca 51
|||||||||||||||||||||||
Sbjct: 19 tgtgcctggctccctgtatgcca 41
>54780_vvi-miR160c:pmrd
Length = 106
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 29 tgtgcctggctccctgtatgcca 51
|||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgcca 31
>48826_osa-miR160a:pmrd
Length = 88
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 29 tgtgcctggctccctgtatgcca 51
|||||||||||||||||||||||
Sbjct: 2 tgtgcctggctccctgtatgcca 24
>48791_oba-miR160:pmrd
Length = 90
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 29 tgtgcctggctccctgtatgcca 51
|||||||||||||||||||||||
Sbjct: 2 tgtgcctggctccctgtatgcca 24
>54938_zma-miR160a:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 gtgcctggctccctgtatgcca 51
||||||||||||||||||||||
Sbjct: 9 gtgcctggctccctgtatgcca 30
>54574_smo-miR160a:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccat 52
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32
>51363_ppt-miR160e:pmrd
Length = 138
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgccatttgc 56
||||||||||||||||||||| ||||
Sbjct: 30 tgcctggctccctgtatgccacttgc 55
>48827_osa-miR160b:pmrd
Length = 139
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 gtgcctggctccctgtatgcca 51
||||||||||||||||||||||
Sbjct: 29 gtgcctggctccctgtatgcca 50
>47338_ath-miRf10238-akr:pmrd
Length = 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 gtgcctggctccctgtatgcca 51
||||||||||||||||||||||
Sbjct: 4 gtgcctggctccctgtatgcca 25
>46935_ath-miR160b:pmrd
Length = 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 gtgcctggctccctgtatgcca 51
||||||||||||||||||||||
Sbjct: 4 gtgcctggctccctgtatgcca 25
>54947_zma-miR160m:pmrd
Length = 81
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54946_zma-miR160i:pmrd
Length = 81
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 2 tgcctggctccctgtatgcca 22
>54945_zma-miR160h:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54944_zma-miR160g:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54942_zma-miR160e:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgcca 29
>54941_zma-miR160d:pmrd
Length = 142
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>54759_ttu-miR160a:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54675_tae-miR160:pmrd
Length = 148
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 22 tgcctggctccctgtatgcca 42
>54575_smo-miR160b:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgcca 33
>54408_sbi-miR160e:pmrd
Length = 95
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54407_sbi-miR160d:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54406_sbi-miR160c:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54405_sbi-miR160b:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54404_sbi-miR160a:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>53874_ptc-miRf12052-akr:pmrd
Length = 110
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 12 tgcctggctccctgtatgcca 32
>51611_ptc-miR160d:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>51608_ptc-miR160a:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>51364_ppt-miR160f:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>51359_ppt-miR160a:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>51334_pga-miR160:pmrd
Length = 80
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>48833_osa-miR160n:pmrd
Length = 131
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>48832_osa-miR160m:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>48829_osa-miR160d:pmrd
Length = 142
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 8 tgcctggctccctgtatgcca 28
>48658_hvv-miR160a:pmrd
Length = 344
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 324 tgcctggctccctgtatgcca 344
>46936_ath-miR160c:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcca 51
|||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgcca 25
>54943_zma-miR160f:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcc 50
||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcc 40
>54760_ttu-miR160b:pmrd
Length = 218
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcc 50
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>54528_sce-miR160:pmrd
Length = 180
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcc 50
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>51367_ppt-miR160i:pmrd
Length = 139
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 gcctggctccctgtatgcca 51
||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgcca 50
>51360_ppt-miR160b:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 gcctggctccctgtatgcca 51
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>48830_osa-miR160e:pmrd
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcc 50
||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcc 30
>48659_hvv-miR160b:pmrd
Length = 47
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcc 50
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>48635_gra-miR160b:pmrd
Length = 293
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcc 50
||||||||||||||||||||
Sbjct: 273 tgcctggctccctgtatgcc 292
>48634_gra-miR160a:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcc 50
||||||||||||||||||||
Sbjct: 86 tgcctggctccctgtatgcc 105
>48544_gma-miR160o:pmrd
Length = 503
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcc 50
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>48543_gma-miR160n:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcc 50
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>48306_bdi-miR160:pmrd
Length = 120
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tgcctggctccctgtatgcc 50
||||||||||||||||||||
Sbjct: 18 tgcctggctccctgtatgcc 37
