miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54561_sly-miR399:pmrd
Length = 71
Score = 141 bits (71), Expect = 7e-35
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 1 tagggctacactctattggcatgcaacttgatcaaatatttgagctgaaatgccaaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagggctacactctattggcatgcaacttgatcaaatatttgagctgaaatgccaaagga 60
Query: 61 gagttgcccta 71
|||||||||||
Sbjct: 61 gagttgcccta 71
>51755_ptc-miR399i:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgcccta 71
|||||||||||||||||||||
Sbjct: 79 tgccaaaggagagttgcccta 99
>48973_osa-miR399j:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgcccta 71
|||||||||||||||||||||
Sbjct: 76 tgccaaaggagagttgcccta 96
>46891_aqc-miR399:pmrd
Length = 98
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgcccta 71
|||||||||||||||||||||
Sbjct: 72 tgccaaaggagagttgcccta 92
>55098_zma-miR399h:pmrd
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 65 tgccaaaggagagttgccct 84
>55095_zma-miR399e:pmrd
Length = 124
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 85 tgccaaaggagagttgccct 104
>54879_vvi-miR399c:pmrd
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 52 tgccaaaggagagttgccct 71
>54878_vvi-miR399b:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 87 tgccaaaggagagttgccct 106
>54497_sbi-miR399i:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 82 tgccaaaggagagttgccct 101
>54492_sbi-miR399d:pmrd
Length = 205
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 166 tgccaaaggagagttgccct 185
>54381_pvu-miR399a:pmrd
Length = 223
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 89 tgccaaaggagagttgccct 108
>48967_osa-miR399d:pmrd
Length = 286
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 256 tgccaaaggagagttgccct 275
>48756_mtr-miR399g:pmrd
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 54 tgccaaaggagagttgccct 73
>48088_ath-miRf10988-akr:pmrd
Length = 129
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 102 tgccaaaggagagttgccct 121
>47473_ath-miRf10373-akr:pmrd
Length = 125
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 100 tgccaaaggagagttgccct 119
>47472_ath-miRf10372-akr:pmrd
Length = 131
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 103 tgccaaaggagagttgccct 122
>47017_ath-miR399c:pmrd
Length = 114
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 84 tgccaaaggagagttgccct 103
>47016_ath-miR399b:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tgccaaaggagagttgccct 70
||||||||||||||||||||
Sbjct: 105 tgccaaaggagagttgccct 124
>54885_vvi-miR399i:pmrd
Length = 122
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 52 gccaaaggagagttgccct 70
|||||||||||||||||||
Sbjct: 93 gccaaaggagagttgccct 111
>53699_ptc-miRf11877-akr:pmrd
Length = 102
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 52 gccaaaggagagttgccct 70
|||||||||||||||||||
Sbjct: 78 gccaaaggagagttgccct 96
>51758_ptc-miR399l:pmrd
Length = 109
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 52 gccaaaggagagttgccct 70
|||||||||||||||||||
Sbjct: 82 gccaaaggagagttgccct 100
