miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54818_vvi-miR169p:pmrd
Length = 102
Score = 202 bits (102), Expect = 4e-53
Identities = 102/102 (100%)
Strand = Plus / Plus
Query: 1 agtgtggaattgagccaaggatgacttgccggcagctgcagcaaggcattaaggtttaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtgtggaattgagccaaggatgacttgccggcagctgcagcaaggcattaaggtttaac 60
Query: 61 tggctataactggcaagcatccgaggctctgtttcaccctct 102
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggctataactggcaagcatccgaggctctgtttcaccctct 102
>54815_vvi-miR169m:pmrd
Length = 102
Score = 180 bits (91), Expect = 1e-46
Identities = 97/99 (97%)
Strand = Plus / Plus
Query: 4 gtggaattgagccaaggatgacttgccggcagctgcagcaaggcattaaggtttaactgg 63
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gtggaagtgagccaaggatgacttgccggcagctgcagcaaggcattaaggtttaactgg 63
Query: 64 ctataactggcaagcatccgaggctctgtttcaccctct 102
| |||||||||||||||||||||||||||||||||||||
Sbjct: 64 ccataactggcaagcatccgaggctctgtttcaccctct 102
>54816_vvi-miR169n:pmrd
Length = 101
Score = 125 bits (63), Expect = 7e-30
Identities = 91/99 (91%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 4 gtggaattgagccaaggatgacttgccggcagctgcagcaaggcattaaggtttaactgg 63
||||||| ||||||||||||||||||||||| ||||||||||||| || |||||||||||
Sbjct: 4 gtggaatagagccaaggatgacttgccggcaactgcagcaaggca-tagggtttaactgg 62
Query: 64 ctataactggcaagcatccgaggctctgtttcaccctct 102
|||||||||||||||| |||||||| |||||||||||
Sbjct: 63 tcataactggcaagcatctgaggctctatttcaccctct 101
>54814_vvi-miR169l:pmrd
Length = 103
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 4 gtggaattgagccaaggatgacttgccg 31
||||||||||||||||||||||||||||
Sbjct: 4 gtggaattgagccaaggatgacttgccg 31
>46965_ath-miR169f:pmrd
Length = 167
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 5 tggaattgagccaaggatgacttgccgg 32
||||||||||||||||||||||||||||
Sbjct: 26 tggaattgagccaaggatgacttgccgg 53
>54819_vvi-miR169q:pmrd
Length = 97
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 4 gtggaattgagccaaggatgacttgccggca 34
||||||| |||||||||||||||||||||||
Sbjct: 4 gtggaatagagccaaggatgacttgccggca 34
>54804_vvi-miR169b:pmrd
Length = 105
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 7 gaattgagccaaggatgacttgccggcagctgcagcaag 45
||||||||||||||||| ||||||| || ||||||||||
Sbjct: 7 gaattgagccaaggatggcttgccgtcatctgcagcaag 45
>54817_vvi-miR169o:pmrd
Length = 103
Score = 52.0 bits (26), Expect = 8e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 4 gtggaattgagccaaggatgacttgccggcagctgcagcaag 45
||||| |||||||||||||||||||||| || | ||||||||
Sbjct: 4 gtggatttgagccaaggatgacttgccgccatcagcagcaag 45
>54091_ptc-miRf12269-akr:pmrd
Length = 122
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 aattgagccaaggatgacttgccggcagc 36
|||| ||||||||||||||||||||||||
Sbjct: 115 aattcagccaaggatgacttgccggcagc 87
>52526_ptc-miRf10704-akr:pmrd
Length = 120
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 aattgagccaaggatgacttgccggcagc 36
|||| ||||||||||||||||||||||||
Sbjct: 114 aattcagccaaggatgacttgccggcagc 86
>51665_ptc-miR169h:pmrd
Length = 118
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 8 aattgagccaaggatgacttgccggcagc 36
|||| ||||||||||||||||||||||||
Sbjct: 7 aattcagccaaggatgacttgccggcagc 35
>54823_vvi-miR169u:pmrd
Length = 110
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 4 gtggaattgagccaaggatgacttgccg 31
||||||||||| ||||||||||||||||
Sbjct: 4 gtggaattgagtcaaggatgacttgccg 31
>54820_vvi-miR169r:pmrd
Length = 109
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 4 gtggaattgagccaaggatgacttgccg 31
||||||||||| ||||||||||||||||
Sbjct: 4 gtggaattgagtcaaggatgacttgccg 31
>54811_vvi-miR169i:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 4 gtggaattgagccaaggatgacttgccg 31
||||||||||||||||||||||| ||||
Sbjct: 4 gtggaattgagccaaggatgactggccg 31
>54810_vvi-miR169h:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 4 gtggaattgagccaaggatgacttgccg 31
|||||||||||||||||||| |||||||
Sbjct: 4 gtggaattgagccaaggatggcttgccg 31
>51676_ptc-miR169s:pmrd
Length = 120
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccggcagc 36
||||||||||||||||||||||||
Sbjct: 13 agccaaggatgacttgccggcagc 36
>51671_ptc-miR169n:pmrd
Length = 107
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 4 gtggaattgagccaaggatgacttgccg 31
||||| ||||||||||||||||||||||
Sbjct: 4 gtggatttgagccaaggatgacttgccg 31
>48239_ath-miRf11139-akr:pmrd
Length = 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 ttgagccaaggatgacttgccgg 32
|||||||||||||||||||||||
Sbjct: 19 ttgagccaaggatgacttgccgg 41
>46967_ath-miR169g:pmrd
Length = 379
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 ttgagccaaggatgacttgccgg 32
|||||||||||||||||||||||
Sbjct: 143 ttgagccaaggatgacttgccgg 165
>46966_ath-miR169g:pmrd
Length = 379
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 ttgagccaaggatgacttgccgg 32
|||||||||||||||||||||||
Sbjct: 143 ttgagccaaggatgacttgccgg 165
>46964_ath-miR169e:pmrd
Length = 217
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 attgagccaaggatgacttgccg 31
|||||||||||||||||||||||
Sbjct: 67 attgagccaaggatgacttgccg 89
>46963_ath-miR169d:pmrd
Length = 154
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 attgagccaaggatgacttgccg 31
|||||||||||||||||||||||
Sbjct: 39 attgagccaaggatgacttgccg 61
>55019_zma-miR169q:pmrd
Length = 69
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccggca 34
||||||||||||||||||||||
Sbjct: 6 agccaaggatgacttgccggca 27
>54825_vvi-miR169w:pmrd
Length = 143
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccggca 34
||||||||||||||||||||||
Sbjct: 14 agccaaggatgacttgccggca 35
>54821_vvi-miR169s:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccggca 34
||||||||||||||||||||||
Sbjct: 14 agccaaggatgacttgccggca 35
>54638_sof-miR169:pmrd
Length = 143
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccggca 34
||||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggca 23
>51664_ptc-miR169g:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccggca 34
||||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccggca 33
>51662_ptc-miR169e:pmrd
Length = 166
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccggca 34
||||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccggca 33
>51661_ptc-miR169d:pmrd
Length = 111
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccggca 34
||||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccggca 33
>51339_phy-miR169:pmrd
Length = 146
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccggca 34
||||||||||||||||||||||
Sbjct: 16 agccaaggatgacttgccggca 37
>48640_gso-miR169g*:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccggca 34
||||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggca 22
>48639_gso-miR169a:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccggca 34
||||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggca 23
>48564_gma-miR169p:pmrd
Length = 111
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccggca 34
||||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggca 23
>55020_zma-miR169r:pmrd
Length = 95
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccggc 33
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggc 22
>55018_zma-miR169p:pmrd
Length = 131
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccggc 33
|||||||||||||||||||||
Sbjct: 4 agccaaggatgacttgccggc 24
>55016_zma-miR169n:pmrd
Length = 191
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccggc 33
|||||||||||||||||||||
Sbjct: 3 agccaaggatgacttgccggc 23
>55005_zma-miR169c:pmrd
Length = 134
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccggc 33
|||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccggc 42
>54803_vvi-miR169a:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 4 gtggaattgagccaaggatgacttgccgg 32
||||||| ||||||||||||||||||||
Sbjct: 5 gtggaatgcagccaaggatgacttgccgg 33
>54447_sbi-miR169k:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccggc 33
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggc 22
>54446_sbi-miR169j:pmrd
Length = 123
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccggc 33
|||||||||||||||||||||
Sbjct: 4 agccaaggatgacttgccggc 24
>50631_osa-miRf11416-akr:pmrd
Length = 141
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 13 agccaaggatgacttgccggc 33
|||||||||||||||||||||
Sbjct: 122 agccaaggatgacttgccggc 102
>50630_osa-miRf11415-akr:pmrd
Length = 147
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccggc 33
|||||||||||||||||||||
Sbjct: 23 agccaaggatgacttgccggc 43
>49845_osa-miRf10630-akr:pmrd
Length = 114
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 13 agccaaggatgacttgccggc 33
|||||||||||||||||||||
Sbjct: 102 agccaaggatgacttgccggc 82
>48891_osa-miR169p:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 13 agccaaggatgacttgccggc 33
|||||||||||||||||||||
Sbjct: 115 agccaaggatgacttgccggc 95
>48880_osa-miR169e:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccggc 33
|||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccggc 32
>48878_osa-miR169c:pmrd
Length = 112
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccggc 33
|||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccggc 32
>48561_gma-miR169a:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccggc 33
|||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccggc 42
>48310_bdi-miR169b:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 4 gtggaattgagccaaggatgacttgccgg 32
||||||| ||||||||||||||||||||
Sbjct: 11 gtggaatgtagccaaggatgacttgccgg 39
>46962_ath-miR169c:pmrd
Length = 411
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccggcagct 37
|||||||||||||||||||| ||||
Sbjct: 114 agccaaggatgacttgccggtagct 138
>55017_zma-miR169o:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccgg 32
||||||||||||||||||||
Sbjct: 125 agccaaggatgacttgccgg 144
>54822_vvi-miR169t:pmrd
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 4 gtggaattgagccaaggatgacttgccg 31
||||||| ||| ||||||||||||||||
Sbjct: 4 gtggaatcgagtcaaggatgacttgccg 31
>54813_vvi-miR169k:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccgg 32
||||||||||||||||||||
Sbjct: 14 agccaaggatgacttgccgg 33
>54812_vvi-miR169j:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccgg 32
||||||||||||||||||||
Sbjct: 14 agccaaggatgacttgccgg 33
>54805_vvi-miR169c:pmrd
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccgg 32
||||||||||||||||||||
Sbjct: 14 agccaaggatgacttgccgg 33
>54547_sly-miR169a:pmrd
Length = 149
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccgg 32
||||||||||||||||||||
Sbjct: 42 agccaaggatgacttgccgg 61
>54438_sbi-miR169b:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccgg 32
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccgg 21
>52490_ptc-miRf10668-akr:pmrd
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 gagccaaggatgacttgccg 31
||||||||||||||||||||
Sbjct: 1 gagccaaggatgacttgccg 20
>51677_ptc-miR169t:pmrd
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 gagccaaggatgacttgccggcag 35
|||||||| |||||||||||||||
Sbjct: 10 gagccaagaatgacttgccggcag 33
>51663_ptc-miR169f:pmrd
Length = 239
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccgg 32
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccgg 31
>48877_osa-miR169b:pmrd
Length = 128
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccgg 32
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccgg 31
>47961_ath-miRf10861-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccgg 32
||||||||||||||||||||
Sbjct: 6 agccaaggatgacttgccgg 25
>47674_ath-miRf10574-akr:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 13 agccaaggatgacttgccgg 32
||||||||||||||||||||
Sbjct: 111 agccaaggatgacttgccgg 92
>46961_ath-miR169b:pmrd
Length = 181
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccgg 32
||||||||||||||||||||
Sbjct: 44 agccaaggatgacttgccgg 63
>46875_aqc-miR169c:pmrd
Length = 111
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 agccaaggatgacttgccgg 32
||||||||||||||||||||
Sbjct: 6 agccaaggatgacttgccgg 25
