miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54826_vvi-miR169x:pmrd
Length = 125
Score = 248 bits (125), Expect = 8e-67
Identities = 125/125 (100%)
Strand = Plus / Plus
Query: 1 gtctcgtctggtagccaaggatgacttgcctaaatccaccaggtttcaaaacactgaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtctcgtctggtagccaaggatgacttgcctaaatccaccaggtttcaaaacactgaatg 60
Query: 61 taattatccacaaagcgattccgtggtctttaggcagtcattccttcggctaaactgacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taattatccacaaagcgattccgtggtctttaggcagtcattccttcggctaaactgacc 120
Query: 121 ggctc 125
|||||
Sbjct: 121 ggctc 125
>55009_zma-miR169g:pmrd
Length = 140
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 7 tctggtagccaaggatgacttgccta 32
||||||||||||||||||||||||||
Sbjct: 16 tctggtagccaaggatgacttgccta 41
>48882_osa-miR169g:pmrd
Length = 126
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 7 tctggtagccaaggatgacttgccta 32
||||||||||||||||||||||||||
Sbjct: 6 tctggtagccaaggatgacttgccta 31
>55013_zma-miR169k:pmrd
Length = 133
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tctggtagccaaggatgacttgcct 31
|||||||||||||||||||||||||
Sbjct: 16 tctggtagccaaggatgacttgcct 40
>55011_zma-miR169i:pmrd
Length = 191
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tctggtagccaaggatgacttgcct 31
|||||||||||||||||||||||||
Sbjct: 16 tctggtagccaaggatgacttgcct 40
>54442_sbi-miR169f:pmrd
Length = 148
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tctggtagccaaggatgacttgcct 31
|||||||||||||||||||||||||
Sbjct: 16 tctggtagccaaggatgacttgcct 40
>54441_sbi-miR169e:pmrd
Length = 240
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tctggtagccaaggatgacttgcct 31
|||||||||||||||||||||||||
Sbjct: 16 tctggtagccaaggatgacttgcct 40
>48885_osa-miR169j:pmrd
Length = 125
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tctggtagccaaggatgacttgcct 31
|||||||||||||||||||||||||
Sbjct: 6 tctggtagccaaggatgacttgcct 30
>48884_osa-miR169i:pmrd
Length = 108
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tctggtagccaaggatgacttgcct 31
|||||||||||||||||||||||||
Sbjct: 6 tctggtagccaaggatgacttgcct 30
>48883_osa-miR169h:pmrd
Length = 122
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 tctggtagccaaggatgacttgcct 31
|||||||||||||||||||||||||
Sbjct: 6 tctggtagccaaggatgacttgcct 30
>54450_sbi-miR169n:pmrd
Length = 93
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 10 ggtagccaaggatgacttgcctaaatcc 37
||||||||||||||||||||||| ||||
Sbjct: 1 ggtagccaaggatgacttgcctatatcc 28
>54440_sbi-miR169d:pmrd
Length = 125
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgccta 32
||||||||||||||||||||||||
Sbjct: 18 tggtagccaaggatgacttgccta 41
>54439_sbi-miR169c:pmrd
Length = 126
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgccta 32
||||||||||||||||||||||||
Sbjct: 18 tggtagccaaggatgacttgccta 41
>51675_ptc-miR169r:pmrd
Length = 119
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgccta 32
||||||||||||||||||||||||
Sbjct: 8 tggtagccaaggatgacttgccta 31
>48888_osa-miR169m:pmrd
Length = 138
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctggtagccaaggatgacttgcct 31
||||||||||||||||||||||||
Sbjct: 7 ctggtagccaaggatgacttgcct 30
>48881_osa-miR169f:pmrd
Length = 170
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 ggtagccaaggatgacttgcctaa 33
||||||||||||||||||||||||
Sbjct: 9 ggtagccaaggatgacttgcctaa 32
>48355_bna-miR169f:pmrd
Length = 201
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgccta 32
||||||||||||||||||||||||
Sbjct: 28 tggtagccaaggatgacttgccta 51
>48354_bna-miR169e:pmrd
Length = 276
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgccta 32
||||||||||||||||||||||||
Sbjct: 248 tggtagccaaggatgacttgccta 271
>48353_bna-miR169d:pmrd
Length = 220
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgccta 32
||||||||||||||||||||||||
Sbjct: 37 tggtagccaaggatgacttgccta 60
>48352_bna-miR169c:pmrd
Length = 176
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgccta 32
||||||||||||||||||||||||
Sbjct: 23 tggtagccaaggatgacttgccta 46
>54807_vvi-miR169e:pmrd
Length = 149
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 gtctcgtctggtagccaaggatgacttgcct 31
|||| ||||| ||||||||||||||||||||
Sbjct: 1 gtcttgtctgatagccaaggatgacttgcct 31
>54548_sly-miR169b:pmrd
Length = 205
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgcct 31
|||||||||||||||||||||||
Sbjct: 168 tggtagccaaggatgacttgcct 190
>52726_ptc-miRf10904-akr:pmrd
Length = 132
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgcct 31
|||||||||||||||||||||||
Sbjct: 12 tggtagccaaggatgacttgcct 34
>51670_ptc-miR169m:pmrd
Length = 119
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgcct 31
|||||||||||||||||||||||
Sbjct: 8 tggtagccaaggatgacttgcct 30
>51668_ptc-miR169k:pmrd
Length = 203
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgcct 31
|||||||||||||||||||||||
Sbjct: 8 tggtagccaaggatgacttgcct 30
>51666_ptc-miR169i:pmrd
Length = 123
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgcct 31
|||||||||||||||||||||||
Sbjct: 8 tggtagccaaggatgacttgcct 30
>48487_ghb-miR169a:pmrd
Length = 189
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgcct 31
|||||||||||||||||||||||
Sbjct: 47 tggtagccaaggatgacttgcct 69
>48360_bna-miR169k:pmrd
Length = 155
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgcct 31
|||||||||||||||||||||||
Sbjct: 31 tggtagccaaggatgacttgcct 53
>48357_bna-miR169h:pmrd
Length = 176
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgcct 31
|||||||||||||||||||||||
Sbjct: 34 tggtagccaaggatgacttgcct 56
>48356_bna-miR169g:pmrd
Length = 168
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgcct 31
|||||||||||||||||||||||
Sbjct: 34 tggtagccaaggatgacttgcct 56
>47103_ath-miRf10003-akr:pmrd
Length = 141
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 tggtagccaaggatgacttgcct 31
|||||||||||||||||||||||
Sbjct: 124 tggtagccaaggatgacttgcct 102
>46973_ath-miR169m:pmrd
Length = 212
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgcct 31
|||||||||||||||||||||||
Sbjct: 39 tggtagccaaggatgacttgcct 61
>46971_ath-miR169k:pmrd
Length = 213
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgcct 31
|||||||||||||||||||||||
Sbjct: 40 tggtagccaaggatgacttgcct 62
>46969_ath-miR169i:pmrd
Length = 206
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgcct 31
|||||||||||||||||||||||
Sbjct: 37 tggtagccaaggatgacttgcct 59
>46968_ath-miR169h:pmrd
Length = 190
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgcct 31
|||||||||||||||||||||||
Sbjct: 43 tggtagccaaggatgacttgcct 65
>55010_zma-miR169h:pmrd
Length = 128
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 tctggtagccaaggatgacttgccta 32
|||| |||||||||||||||||||||
Sbjct: 16 tctgatagccaaggatgacttgccta 41
>55008_zma-miR169f:pmrd
Length = 150
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 gtagccaaggatgacttgccta 32
||||||||||||||||||||||
Sbjct: 20 gtagccaaggatgacttgccta 41
>55007_zma-miR169e:pmrd
Length = 128
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 7 tctggtagccaaggatgacttgccta 32
|||| |||||||||||||||||||||
Sbjct: 114 tctgatagccaaggatgacttgccta 89
>55006_zma-miR169d:pmrd
Length = 128
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 7 tctggtagccaaggatgacttgccta 32
|||| |||||||||||||||||||||
Sbjct: 114 tctgatagccaaggatgacttgccta 89
>54550_sly-miR169d:pmrd
Length = 176
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 gtagccaaggatgacttgccta 32
||||||||||||||||||||||
Sbjct: 38 gtagccaaggatgacttgccta 59
>54449_sbi-miR169m:pmrd
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 tagccaaggatgacttgcctaaatcc 37
||||||||||||||||||||| ||||
Sbjct: 1 tagccaaggatgacttgcctatatcc 26
>51680_ptc-miR169w:pmrd
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgcc 30
||||||||||||||||||||||
Sbjct: 7 tggtagccaaggatgacttgcc 28
>51679_ptc-miR169v:pmrd
Length = 110
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgcc 30
||||||||||||||||||||||
Sbjct: 7 tggtagccaaggatgacttgcc 28
>46873_aqc-miR169a:pmrd
Length = 158
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 gtagccaaggatgacttgccta 32
||||||||||||||||||||||
Sbjct: 25 gtagccaaggatgacttgccta 46
>55015_zma-miR169m:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tagccaaggatgacttgccta 32
|||||||||||||||||||||
Sbjct: 1 tagccaaggatgacttgccta 21
>55014_zma-miR169l:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tagccaaggatgacttgccta 32
|||||||||||||||||||||
Sbjct: 1 tagccaaggatgacttgccta 21
>48892_osa-miR169q:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 7 tctggtagccaaggatgacttgcct 31
|||| ||||||||||||||||||||
Sbjct: 103 tctgatagccaaggatgacttgcct 79
>48887_osa-miR169l:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 tctggtagccaaggatgacttgcct 31
|||| ||||||||||||||||||||
Sbjct: 6 tctgatagccaaggatgacttgcct 30
>48361_bna-miR169l:pmrd
Length = 199
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 gtagccaaggatgacttgcct 31
|||||||||||||||||||||
Sbjct: 24 gtagccaaggatgacttgcct 44
>48359_bna-miR169j:pmrd
Length = 167
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 gtagccaaggatgacttgcct 31
|||||||||||||||||||||
Sbjct: 8 gtagccaaggatgacttgcct 28
>48358_bna-miR169i:pmrd
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 gtagccaaggatgacttgcct 31
|||||||||||||||||||||
Sbjct: 14 gtagccaaggatgacttgcct 34
>46974_ath-miR169n:pmrd
Length = 215
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 gtagccaaggatgacttgcct 31
|||||||||||||||||||||
Sbjct: 44 gtagccaaggatgacttgcct 64
>46970_ath-miR169j:pmrd
Length = 221
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 gtagccaaggatgacttgcct 31
|||||||||||||||||||||
Sbjct: 50 gtagccaaggatgacttgcct 70
>55019_zma-miR169q:pmrd
Length = 69
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 gtagccaaggatgacttgcc 30
||||||||||||||||||||
Sbjct: 4 gtagccaaggatgacttgcc 23
>55018_zma-miR169p:pmrd
Length = 131
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 gtagccaaggatgacttgcc 30
||||||||||||||||||||
Sbjct: 2 gtagccaaggatgacttgcc 21
>55017_zma-miR169o:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 gtagccaaggatgacttgcc 30
||||||||||||||||||||
Sbjct: 123 gtagccaaggatgacttgcc 142
>55016_zma-miR169n:pmrd
Length = 191
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 gtagccaaggatgacttgcc 30
||||||||||||||||||||
Sbjct: 1 gtagccaaggatgacttgcc 20
>55012_zma-miR169j:pmrd
Length = 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 tagccaaggatgacttgcct 31
||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40
>54827_vvi-miR169y:pmrd
Length = 248
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgccta 32
||||||| ||||||||||||||||
Sbjct: 8 tggtagcgaaggatgacttgccta 31
>54448_sbi-miR169l:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 12 tagccaaggatgacttgcct 31
||||||||||||||||||||
Sbjct: 94 tagccaaggatgacttgcct 75
>54446_sbi-miR169j:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 gtagccaaggatgacttgcc 30
||||||||||||||||||||
Sbjct: 2 gtagccaaggatgacttgcc 21
>54444_sbi-miR169h:pmrd
Length = 155
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 tagccaaggatgacttgcct 31
||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40
>54443_sbi-miR169g:pmrd
Length = 152
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 tagccaaggatgacttgcct 31
||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40
>51669_ptc-miR169l:pmrd
Length = 143
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 tagccaaggatgacttgcct 31
||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30
>51667_ptc-miR169j:pmrd
Length = 137
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 tagccaaggatgacttgcct 31
||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30
>48890_osa-miR169o:pmrd
Length = 173
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgccta 32
||||||||||| ||||||||||||
Sbjct: 8 tggtagccaagaatgacttgccta 31
>48889_osa-miR169n:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tggtagccaaggatgacttgccta 32
||||||||||| ||||||||||||
Sbjct: 8 tggtagccaagaatgacttgccta 31
>48886_osa-miR169k:pmrd
Length = 156
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 tagccaaggatgacttgcct 31
||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30
>48880_osa-miR169e:pmrd
Length = 132
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 gtagccaaggatgacttgcc 30
||||||||||||||||||||
Sbjct: 10 gtagccaaggatgacttgcc 29
>48310_bdi-miR169b:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 gtagccaaggatgacttgcc 30
||||||||||||||||||||
Sbjct: 18 gtagccaaggatgacttgcc 37
>46972_ath-miR169l:pmrd
Length = 211
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 tagccaaggatgacttgcct 31
||||||||||||||||||||
Sbjct: 44 tagccaaggatgacttgcct 63
>46874_aqc-miR169b:pmrd
Length = 180
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 tagccaaggatgacttgcct 31
||||||||||||||||||||
Sbjct: 1 tagccaaggatgacttgcct 20
