miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>54835_vvi-miR171h:pmrd
          Length = 96

 Score =  190 bits (96), Expect = 1e-49
 Identities = 96/96 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tttcacgagatgttggtgcggttcaacctaactgtagtgtccatgaatgtatcgactctg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tttcacgagatgttggtgcggttcaacctaactgtagtgtccatgaatgtatcgactctg 60

                                              
Query: 61 atgtttggttgagccgcgccaatatcccgtctatct 96
          ||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgtttggttgagccgcgccaatatcccgtctatct 96




>54910_zel-miR171:pmrd
          Length = 65

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 69 ttgagccgcgccaatatccc 88
          ||||||||||||||||||||
Sbjct: 4  ttgagccgcgccaatatccc 23




>48636_gra-miR171:pmrd
          Length = 117

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 69 ttgagccgcgccaatatccc 88
          ||||||||||||||||||||
Sbjct: 4  ttgagccgcgccaatatccc 23




>46981_ath-miR171n:pmrd
          Length = 461

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 69 ttgagccgcgccaatatccc 88
          ||||||||||||||||||||
Sbjct: 4  ttgagccgcgccaatatccc 23