miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54853_vvi-miR394c:pmrd
Length = 102
Score = 202 bits (102), Expect = 4e-53
Identities = 102/102 (100%)
Strand = Plus / Plus
Query: 1 cagagccattttggcattctgtccacctccatatataccaattcttctgaattggcgccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagagccattttggcattctgtccacctccatatataccaattcttctgaattggcgccc 60
Query: 61 acaagcgtttggaggcggccaggatgccaaattggctctgta 102
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acaagcgtttggaggcggccaggatgccaaattggctctgta 102
>54851_vvi-miR394a:pmrd
Length = 89
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 cagagccattttggcattctgtccacctccat 32
||||||||||||||||||||||||||||||||
Sbjct: 1 cagagccattttggcattctgtccacctccat 32
>48502_ghr-miR394:pmrd
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttggcattctgtccacctccat 32
||||||||||||||||||||||
Sbjct: 1 ttggcattctgtccacctccat 22
>48920_osa-miR394:pmrd
Length = 110
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tttggcattctgtccacctcc 30
|||||||||||||||||||||
Sbjct: 13 tttggcattctgtccacctcc 33
>47001_ath-miR394b:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tttggcattctgtccacctcc 30
|||||||||||||||||||||
Sbjct: 13 tttggcattctgtccacctcc 33
>47000_ath-miR394a:pmrd
Length = 117
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tttggcattctgtccacctcc 30
|||||||||||||||||||||
Sbjct: 13 tttggcattctgtccacctcc 33
>55065_zma-miR394b:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttggcattctgtccacctcc 30
||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40
>55064_zma-miR394a:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttggcattctgtccacctcc 30
||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40
>54852_vvi-miR394b:pmrd
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttggcattctgtccacctcc 30
||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcc 30
>54472_sbi-miR394b:pmrd
Length = 111
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttggcattctgtccacctcc 30
||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40
>54471_sbi-miR394a:pmrd
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttggcattctgtccacctcc 30
||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40
>51918_ptc-miRf10096-akr:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttggcattctgtccacctcc 30
||||||||||||||||||||
Sbjct: 25 ttggcattctgtccacctcc 44
