miRNEST 2.0, an integrative microRNA resource :: BLAST
>54636_sof-miR168a:pmrd
Length = 104
Score = 139 bits (70), Expect = 6e-34
Identities = 91/97 (93%), Gaps = 2/97 (2%)
Strand = Plus / Plus
Query: 18 cgccgcctcgggctcgcttggtgcagatcgggaccctccgcccgcccccgccgggccgga 77
|||||||||||||||||||||||||||||||||||| ||||||| || | |||| ||||
Sbjct: 8 cgccgcctcgggctcgcttggtgcagatcgggacccgccgcccggcc--gacgggacgga 65
Query: 78 tcccgccttgcaccaagtgaatcggagccggcgcagc 114
|||||||||||||||||||||||||||||||||||||
Sbjct: 66 tcccgccttgcaccaagtgaatcggagccggcgcagc 102
>54999_zma-miR168a:pmrd
Length = 104
Score = 135 bits (68), Expect = 9e-33
Identities = 92/99 (92%), Gaps = 2/99 (2%)
Strand = Plus / Plus
Query: 18 cgccgcctcgggctcgcttggtgcagatcgggaccctccgcccgcccccgccgggccgga 77
|||||||||||||||||||||||||||||||||||| ||||||| ||| |||| ||||
Sbjct: 8 cgccgcctcgggctcgcttggtgcagatcgggacccgccgcccg--gccgacgggacgga 65
Query: 78 tcccgccttgcaccaagtgaatcggagccggcgcagcga 116
||||||||||||||||||||||||||||||||| |||||
Sbjct: 66 tcccgccttgcaccaagtgaatcggagccggcggagcga 104
>55000_zma-miR168b:pmrd
Length = 104
Score = 127 bits (64), Expect = 2e-30
Identities = 91/99 (91%), Gaps = 2/99 (2%)
Strand = Plus / Plus
Query: 18 cgccgcctcgggctcgcttggtgcagatcgggaccctccgcccgcccccgccgggccgga 77
||||| |||||||||||||||||||||||||||||| ||||||| || | |||| ||||
Sbjct: 8 cgccgtctcgggctcgcttggtgcagatcgggacccgccgcccggcc--gacgggacgga 65
Query: 78 tcccgccttgcaccaagtgaatcggagccggcgcagcga 116
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 66 tcccgccttgcatcaagtgaatcggagccggcgcagcga 104
>48873_osa-miR168a:pmrd
Length = 87
Score = 119 bits (60), Expect = 6e-28
Identities = 83/88 (94%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 21 cgcctcgggctcgcttggtgcagatcgggaccctccgcccgcccccgccggg-ccggatc 79
||||||||||||||||||||||||||||||||| ||||| ||| | |||||| |||||||
Sbjct: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgcc-gccgctgccggggccggatc 59
Query: 80 ccgccttgcaccaagtgaatcggagccg 107
||||||||||||||||||||||||||||
Sbjct: 60 ccgccttgcaccaagtgaatcggagccg 87
>48872_osa-miR168a:pmrd
Length = 87
Score = 119 bits (60), Expect = 6e-28
Identities = 83/88 (94%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 21 cgcctcgggctcgcttggtgcagatcgggaccctccgcccgcccccgccggg-ccggatc 79
||||||||||||||||||||||||||||||||| ||||| ||| | |||||| |||||||
Sbjct: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgcc-gccgctgccggggccggatc 59
Query: 80 ccgccttgcaccaagtgaatcggagccg 107
||||||||||||||||||||||||||||
Sbjct: 60 ccgccttgcaccaagtgaatcggagccg 87
>48871_osa-miR168a:pmrd
Length = 87
Score = 119 bits (60), Expect = 6e-28
Identities = 83/88 (94%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 21 cgcctcgggctcgcttggtgcagatcgggaccctccgcccgcccccgccggg-ccggatc 79
||||||||||||||||||||||||||||||||| ||||| ||| | |||||| |||||||
Sbjct: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgcc-gccgctgccggggccggatc 59
Query: 80 ccgccttgcaccaagtgaatcggagccg 107
||||||||||||||||||||||||||||
Sbjct: 60 ccgccttgcaccaagtgaatcggagccg 87
>48661_hvv-miR168:pmrd
Length = 66
Score = 109 bits (55), Expect = 5e-25
Identities = 65/67 (97%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 31 tcgcttggtgcagatcgggaccctccgcccgcccccgccgggccggatcccgccttgcac 90
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcagatcgggaccctccgcccg-ccccgacgggccggatcccgccttgcac 59
Query: 91 caagtga 97
|||||||
Sbjct: 60 caagtga 66
>54637_sof-miR168b:pmrd
Length = 103
Score = 105 bits (53), Expect = 8e-24
Identities = 81/88 (92%), Gaps = 3/88 (3%)
Strand = Plus / Plus
Query: 27 gggctcgcttggtgcagatcgggaccctccgcccgcccccgccgggccggatcccgcctt 86
|||||||||||| |||||||||||||| ||||||| || | |||| |||||||||||||
Sbjct: 17 gggctcgcttgg-gcagatcgggacccgccgcccggcc--gacgggacggatcccgcctt 73
Query: 87 gcaccaagtgaatcggagccggcgcagc 114
||||||||||||||||||||||||||||
Sbjct: 74 gcaccaagtgaatcggagccggcgcagc 101
>54436_sbi-miR168:pmrd
Length = 106
Score = 97.6 bits (49), Expect = 2e-21
Identities = 85/97 (87%)
Strand = Plus / Plus
Query: 18 cgccgcctcgggctcgcttggtgcagatcgggaccctccgcccgcccccgccgggccgga 77
||||||||||||||||||||||||||||||||||| ||||| | | | |||| | ||
Sbjct: 8 cgccgcctcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacgggacaga 67
Query: 78 tcccgccttgcaccaagtgaatcggagccggcgcagc 114
||||||||||||||||||||||| ||||||| |||||
Sbjct: 68 tcccgccttgcaccaagtgaatccgagccggagcagc 104
>55002_zma-miR168m:pmrd
Length = 65
Score = 79.8 bits (40), Expect = 5e-16
Identities = 61/67 (91%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 31 tcgcttggtgcagatcgggaccctccgcccgcccccgccgggccggatcccgccttgcac 90
||||||||||||||||||||||| ||||||| ||| |||| |||||||||||||||||
Sbjct: 1 tcgcttggtgcagatcgggacccgccgcccg--gccgacgggacggatcccgccttgcac 58
Query: 91 caagtga 97
|||||||
Sbjct: 59 caagtga 65
>54655_ssp-miR168:pmrd
Length = 65
Score = 79.8 bits (40), Expect = 5e-16
Identities = 61/67 (91%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 31 tcgcttggtgcagatcgggaccctccgcccgcccccgccgggccggatcccgccttgcac 90
||||||||||||||||||||||| ||||||| ||| |||| |||||||||||||||||
Sbjct: 1 tcgcttggtgcagatcgggacccgccgcccg--gccgacgggacggatcccgccttgcac 58
Query: 91 caagtga 97
|||||||
Sbjct: 59 caagtga 65
>48875_osa-miR168m:pmrd
Length = 67
Score = 79.8 bits (40), Expect = 5e-16
Identities = 63/68 (92%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 31 tcgcttggtgcagatcgggaccctccgcccgcccccgccggg-ccggatcccgccttgca 89
||||||||||||||||||||||| ||||| ||| | |||||| |||||||||||||||||
Sbjct: 1 tcgcttggtgcagatcgggacccgccgcc-gccgctgccggggccggatcccgccttgca 59
Query: 90 ccaagtga 97
||||||||
Sbjct: 60 ccaagtga 67
>55001_zma-miR168c:pmrd
Length = 67
Score = 48.1 bits (24), Expect = 2e-06
Identities = 59/68 (86%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 31 tcgcttggtgcagatcgggaccctccgcccgcccccgccgggccggatcccg-ccttgca 89
||||||| ||||||||||||||| |||||| | | || |||| ||||||||| |||||||
Sbjct: 1 tcgcttgttgcagatcgggacccgccgccc-cgcgcgacgggacggatcccgcccttgca 59
Query: 90 ccaagtga 97
|||||||
Sbjct: 60 tcaagtga 67
>54802_vvi-miR168:pmrd
Length = 132
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 76 gatcccgccttgcaccaagtgaatcggagccggc 109
|||||||||||||| ||| |||||||||| ||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggagacggc 132
>51651_ptc-miR168b:pmrd
Length = 136
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 75 ggatcccgccttgcaccaagtgaatcggag 104
||||||||||||||| ||| ||||||||||
Sbjct: 106 ggatcccgccttgcatcaactgaatcggag 135
>51650_ptc-miR168a:pmrd
Length = 160
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 75 ggatcccgccttgcaccaagtgaatcggag 104
||||||||||||||| ||| ||||||||||
Sbjct: 130 ggatcccgccttgcatcaactgaatcggag 159
>48560_gma-miR168:pmrd
Length = 125
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 75 ggatcccgccttgcaccaagtgaatcggag 104
||||||||||||||| ||| ||||||||||
Sbjct: 84 ggatcccgccttgcatcaactgaatcggag 113
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 75 ggatcccgccttgcaccaagtgaatcgga 103
||||||||||||||| ||| |||||||||
Sbjct: 94 ggatcccgccttgcatcaactgaatcgga 122
>46957_ath-miR168a:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 75 ggatcccgccttgcaccaagtgaatcgga 103
||||||||||||||| ||| |||||||||
Sbjct: 99 ggatcccgccttgcatcaactgaatcgga 127
