miRNEST 2.0, an integrative microRNA resource :: BLAST
>54686_tae-miR319a:pmrd
Length = 196
Score = 168 bits (85), Expect = 1e-42
Identities = 180/212 (84%), Gaps = 16/212 (7%)
Strand = Plus / Plus
Query: 34 gggagctttcttctgtccacccatgggaggtagcggggattgaacgagctgccgactcat 93
||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggagctcacttcagtccactcatgggaggtagcggggattgaacgagctgccgactcat 60
Query: 94 tcactcgaacacacagtggataactggatatgcagactaatccaaggcataatatctact 153
|||||||| |||||||| |||| || |||||| |||| |||||| |
Sbjct: 61 tcactcgagcacacagtagata--------tg-agactagtccagggcata-------cc 104
Query: 154 agtgtggaataatatctactgtgtgaatgagcgaatgaagcgggagattgttctctcttt 213
||| || | ||||| ||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 105 agtatgttacaatatgtactgtgcgaatgagcgaatgcagcgggagattgttctctcttt 164
Query: 214 cctcctccatgcttggactgaagggagctccc 245
||||||||||||||||||||||||||||||||
Sbjct: 165 cctcctccatgcttggactgaagggagctccc 196
>46993_ath-miR319b:pmrd
Length = 172
Score = 50.1 bits (25), Expect = 9e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 222 atgcttggactgaagggagctccct 246
|||||||||||||||||||||||||
Sbjct: 148 atgcttggactgaagggagctccct 172
>54846_vvi-miR319f:pmrd
Length = 193
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 223 tgcttggactgaagggagctccct 246
||||||||||||||||||||||||
Sbjct: 159 tgcttggactgaagggagctccct 182
>54844_vvi-miR319c:pmrd
Length = 182
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 223 tgcttggactgaagggagctccct 246
||||||||||||||||||||||||
Sbjct: 148 tgcttggactgaagggagctccct 171
Score = 42.1 bits (21), Expect = 2e-04
Identities = 52/61 (85%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 36 gagctttcttctgtccacccatgggaggtagcggggattgaacgagctgccgactcattc 95
||||||||||| |||||| |||||| || || || |||||| ||||||||||||||||
Sbjct: 13 gagctttcttcagtccactcatgggtggcagtagg-attgaattagctgccgactcattc 71
Query: 96 a 96
|
Sbjct: 72 a 72
>51710_ptc-miR319d:pmrd
Length = 193
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 223 tgcttggactgaagggagctccct 246
||||||||||||||||||||||||
Sbjct: 162 tgcttggactgaagggagctccct 185
>51709_ptc-miR319c:pmrd
Length = 196
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 223 tgcttggactgaagggagctccct 246
||||||||||||||||||||||||
Sbjct: 165 tgcttggactgaagggagctccct 188
>54843_vvi-miR319b:pmrd
Length = 194
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 225 cttggactgaagggagctccct 246
||||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctccct 183
>54754_tar-miR159:pmrd
Length = 192
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 226 ttggactgaagggagctccctc 247
||||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccctc 182
>54670_svi-miR159:pmrd
Length = 191
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 226 ttggactgaagggagctccctc 247
||||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccctc 182
>54583_smo-miR319:pmrd
Length = 215
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 225 cttggactgaagggagctccct 246
||||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctccct 206
>54391_rin-miR159:pmrd
Length = 192
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 226 ttggactgaagggagctccctc 247
||||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccctc 182
>51713_ptc-miR319g:pmrd
Length = 204
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 223 tgcttggactgaagggagctcc 244
||||||||||||||||||||||
Sbjct: 173 tgcttggactgaagggagctcc 194
Score = 40.1 bits (20), Expect = 9e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 73 ttgaacgagctgccgactcattca 96
|||||| |||||||||||||||||
Sbjct: 52 ttgaactagctgccgactcattca 75
>51712_ptc-miR319f:pmrd
Length = 202
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 223 tgcttggactgaagggagctcc 244
||||||||||||||||||||||
Sbjct: 171 tgcttggactgaagggagctcc 192
>51707_ptc-miR319a:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 225 cttggactgaagggagctccct 246
||||||||||||||||||||||
Sbjct: 159 cttggactgaagggagctccct 180
Score = 42.1 bits (21), Expect = 2e-04
Identities = 52/61 (85%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 36 gagctttcttctgtccacccatgggaggtagcggggattgaacgagctgccgactcattc 95
||||||||||| |||||| |||||| ||||| ||||| || ||||||||||||||||
Sbjct: 13 gagctttcttcagtccactcatgggtggtag-taggatttaattagctgccgactcattc 71
Query: 96 a 96
|
Sbjct: 72 a 72
>51351_ppl-miR319:pmrd
Length = 204
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 223 tgcttggactgaagggagctcc 244
||||||||||||||||||||||
Sbjct: 171 tgcttggactgaagggagctcc 192
Score = 40.1 bits (20), Expect = 9e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 69 gggattgaacgagctgccgactcattca 96
||||||||| |||||||||||||||||
Sbjct: 47 gggattgaattagctgccgactcattca 74
>48788_nof-miR159:pmrd
Length = 192
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 226 ttggactgaagggagctccctc 247
||||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccctc 182
>48694_mma-miR159:pmrd
Length = 192
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 226 ttggactgaagggagctccctc 247
||||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccctc 182
>48573_gma-miR319b:pmrd
Length = 208
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 225 cttggactgaagggagctccct 246
||||||||||||||||||||||
Sbjct: 169 cttggactgaagggagctccct 190
>48572_gma-miR319a:pmrd
Length = 207
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 225 cttggactgaagggagctccct 246
||||||||||||||||||||||
Sbjct: 168 cttggactgaagggagctccct 189
>48479_fal-miR159:pmrd
Length = 192
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 226 ttggactgaagggagctccctc 247
||||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccctc 182
>48476_dso-miR159:pmrd
Length = 192
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 226 ttggactgaagggagctccctc 247
||||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccctc 182
>48422_cor-miR159:pmrd
Length = 193
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 226 ttggactgaagggagctccctc 247
||||||||||||||||||||||
Sbjct: 162 ttggactgaagggagctccctc 183
>48421_cmi-miR159:pmrd
Length = 193
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 226 ttggactgaagggagctccctc 247
||||||||||||||||||||||
Sbjct: 162 ttggactgaagggagctccctc 183
>48415_bvl-miR159:pmrd
Length = 192
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 226 ttggactgaagggagctccctc 247
||||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccctc 182
>47656_ath-miRf10556-akr:pmrd
Length = 203
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 226 ttggactgaagggagctccctc 247
||||||||||||||||||||||
Sbjct: 37 ttggactgaagggagctccctc 16
>46992_ath-miR319a:pmrd
Length = 176
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 226 ttggactgaagggagctccctc 247
||||||||||||||||||||||
Sbjct: 154 ttggactgaagggagctccctc 175
>46884_aqc-miR319:pmrd
Length = 177
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 225 cttggactgaagggagctccct 246
||||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctccct 175
>46860_ape-miR159:pmrd
Length = 192
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 226 ttggactgaagggagctccctc 247
||||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccctc 182
>46856_ahi-miR159:pmrd
Length = 192
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 226 ttggactgaagggagctccctc 247
||||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccctc 182
>46855_aha-miR159:pmrd
Length = 192
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 226 ttggactgaagggagctccctc 247
||||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccctc 182
>46846_acb-miR159:pmrd
Length = 191
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 226 ttggactgaagggagctccctc 247
||||||||||||||||||||||
Sbjct: 160 ttggactgaagggagctccctc 181
>55052_zma-miR319d:pmrd
Length = 212
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 223 tgcttggactgaagggagctccctc 247
|||||||||||||||| ||||||||
Sbjct: 171 tgcttggactgaagggtgctccctc 195
>55050_zma-miR319b:pmrd
Length = 213
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 223 tgcttggactgaagggagctccctc 247
|||||||||||||||| ||||||||
Sbjct: 172 tgcttggactgaagggtgctccctc 196
>54468_sbi-miR319:pmrd
Length = 249
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 223 tgcttggactgaagggagctccctc 247
|||||||||||||||| ||||||||
Sbjct: 188 tgcttggactgaagggtgctccctc 212
>54380_pvu-miR319c:pmrd
Length = 734
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 224 gcttggactgaagggagctcc 244
|||||||||||||||||||||
Sbjct: 408 gcttggactgaagggagctcc 428
>52451_ptc-miRf10629-akr:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 223 tgcttggactgaagggagctc 243
|||||||||||||||||||||
Sbjct: 150 tgcttggactgaagggagctc 170
>51708_ptc-miR319b:pmrd
Length = 185
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 226 ttggactgaagggagctccct 246
|||||||||||||||||||||
Sbjct: 157 ttggactgaagggagctccct 177
>51390_ppt-miR319e:pmrd
Length = 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 225 cttggactgaagggagctccc 245
|||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctccc 167
>51389_ppt-miR319d:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 225 cttggactgaagggagctccc 245
|||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctccc 165
>51388_ppt-miR319d:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 225 cttggactgaagggagctccc 245
|||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctccc 165
>51387_ppt-miR319d:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 225 cttggactgaagggagctccc 245
|||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctccc 165
>51386_ppt-miR319c:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 225 cttggactgaagggagctccc 245
|||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctccc 174
>48915_osa-miR319b:pmrd
Length = 197
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 223 tgcttggactgaagggagctccctc 247
|||||||||||||||| ||||||||
Sbjct: 165 tgcttggactgaagggtgctccctc 189
>48687_ltu-miR319:pmrd
Length = 167
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 225 cttggactgaagggagctccc 245
|||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctccc 167
>48478_ech-miR159:pmrd
Length = 192
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 226 ttggactgaagggagctccct 246
|||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccct 181
>48429_crb-miR159:pmrd
Length = 194
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 226 ttggactgaagggagctccct 246
|||||||||||||||||||||
Sbjct: 163 ttggactgaagggagctccct 183
>54847_vvi-miR319g:pmrd
Length = 222
Score = 40.1 bits (20), Expect = 9e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 226 ttggactgaagggagctccc 245
||||||||||||||||||||
Sbjct: 192 ttggactgaagggagctccc 211
>51385_ppt-miR319b:pmrd
Length = 160
Score = 40.1 bits (20), Expect = 9e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 225 cttggactgaagggagctcc 244
||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcc 159
>51384_ppt-miR319a:pmrd
Length = 169
Score = 40.1 bits (20), Expect = 9e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 225 cttggactgaagggagctcc 244
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
