miRNEST 2.0, an integrative microRNA resource :: BLAST
>48480_far-miR396:pmrd
Length = 99
Score = 83.8 bits (42), Expect = 5e-17
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 21 gcggccatgctctccacaggctttcttgaactgtgaactcgtgcgc 66
||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 6 gcggccatgctctccacaggctttcttgaactgtgaactcgcgcgc 51
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 153 atggttcaagaaagtccttggaaaacatggccgcc 187
||||||||||||||||||||||||||||| |||||
Sbjct: 62 atggttcaagaaagtccttggaaaacatgcccgcc 96
>48797_oru-miR396:pmrd
Length = 178
Score = 81.8 bits (41), Expect = 2e-16
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 23 ggccatgctctccacaggctttcttgaactgtgaactcgtg 63
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggccatgctctccacaggctttcttgaactgtgaactcgtg 41
Score = 65.9 bits (33), Expect = 1e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 146 cttgttgatggttcaagaaagtccttggaaaacatgg 182
||||||||| |||||||||||||||||||||||||||
Sbjct: 139 cttgttgatagttcaagaaagtccttggaaaacatgg 175
>48954_osa-miR396f:pmrd
Length = 176
Score = 79.8 bits (40), Expect = 8e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 24 gccatgctctccacaggctttcttgaactgtgaactcgtg 63
||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccatgctctccacaggctttcttgaactgtgaactcgtg 40
Score = 65.9 bits (33), Expect = 1e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 146 cttgttgatggttcaagaaagtccttggaaaacatgg 182
||||||||| |||||||||||||||||||||||||||
Sbjct: 138 cttgttgatagttcaagaaagtccttggaaaacatgg 174
>48953_osa-miR396f:pmrd
Length = 176
Score = 79.8 bits (40), Expect = 8e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 24 gccatgctctccacaggctttcttgaactgtgaactcgtg 63
||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccatgctctccacaggctttcttgaactgtgaactcgtg 40
Score = 65.9 bits (33), Expect = 1e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 146 cttgttgatggttcaagaaagtccttggaaaacatgg 182
||||||||| |||||||||||||||||||||||||||
Sbjct: 138 cttgttgatagttcaagaaagtccttggaaaacatgg 174
>48952_osa-miR396f:pmrd
Length = 176
Score = 79.8 bits (40), Expect = 8e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 24 gccatgctctccacaggctttcttgaactgtgaactcgtg 63
||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccatgctctccacaggctttcttgaactgtgaactcgtg 40
Score = 65.9 bits (33), Expect = 1e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 146 cttgttgatggttcaagaaagtccttggaaaacatgg 182
||||||||| |||||||||||||||||||||||||||
Sbjct: 138 cttgttgatagttcaagaaagtccttggaaaacatgg 174
>48651_hvu-miR396:pmrd
Length = 107
Score = 75.8 bits (38), Expect = 1e-14
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 21 gcggccatgctctccacaggctttcttgaactgtgaactcgtgcgc 66
|||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 1 gcggccatgctctccacaggctttcttgaactgtcaactcgcgcgc 46
Score = 67.9 bits (34), Expect = 3e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 149 gttgatggttcaagaaagtccttggaaaacatggccgc 186
||||||||||||||||||||||||||||||||| ||||
Sbjct: 70 gttgatggttcaagaaagtccttggaaaacatgcccgc 107
>48948_osa-miR396d:pmrd
Length = 142
Score = 71.9 bits (36), Expect = 2e-13
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 20 tgcggccatgctctccacaggctttcttgaactgtgaactcgtg 63
||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 8 tgcgggcatgctttccacaggctttcttgaactgtgaactcgtg 51
>48951_osa-miR396e:pmrd
Length = 184
Score = 69.9 bits (35), Expect = 7e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 21 gcggccatgctctccacaggctttcttgaactgtgaactcgtg 63
|||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 1 gcgggcatgctttccacaggctttcttgaactgtgaactcgtg 43
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 148 tgttgatggttcaagaaagtccttggaaaacatg 181
||||||||||||||||||| || |||||| ||||
Sbjct: 147 tgttgatggttcaagaaagcccatggaaaccatg 180
>48950_osa-miR396e:pmrd
Length = 184
Score = 69.9 bits (35), Expect = 7e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 21 gcggccatgctctccacaggctttcttgaactgtgaactcgtg 63
|||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 1 gcgggcatgctttccacaggctttcttgaactgtgaactcgtg 43
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 148 tgttgatggttcaagaaagtccttggaaaacatg 181
||||||||||||||||||| || |||||| ||||
Sbjct: 147 tgttgatggttcaagaaagcccatggaaaccatg 180
>48949_osa-miR396e:pmrd
Length = 184
Score = 69.9 bits (35), Expect = 7e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 21 gcggccatgctctccacaggctttcttgaactgtgaactcgtg 63
|||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 1 gcgggcatgctttccacaggctttcttgaactgtgaactcgtg 43
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 148 tgttgatggttcaagaaagtccttggaaaacatg 181
||||||||||||||||||| || |||||| ||||
Sbjct: 147 tgttgatggttcaagaaagcccatggaaaccatg 180
>55085_zma-miR396n:pmrd
Length = 186
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 33 tccacaggctttcttgaactgtgaactcgtg 63
|||||||||||||||||||||||||||||||
Sbjct: 3 tccacaggctttcttgaactgtgaactcgtg 33
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 148 tgttgatggttcaagaaagtccttggaaa 176
||||||||||||||||||| || ||||||
Sbjct: 158 tgttgatggttcaagaaagcccatggaaa 186
>55084_zma-miR396m:pmrd
Length = 227
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 33 tccacaggctttcttgaactgtgaactcgtg 63
|||||||||||||||||||||||||||||||
Sbjct: 3 tccacaggctttcttgaactgtgaactcgtg 33
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 148 tgttgatggttcaagaaagtccttggaaa 176
||||||||||||||||||| || ||||||
Sbjct: 199 tgttgatggttcaagaaagcccatggaaa 227
>55076_zma-miR396e:pmrd
Length = 186
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 33 tccacaggctttcttgaactgtgaactcgtg 63
|||||||||||||||||||||||||||||||
Sbjct: 3 tccacaggctttcttgaactgtgaactcgtg 33
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 148 tgttgatggttcaagaaagtccttggaaa 176
||||||||||||||||||| || ||||||
Sbjct: 158 tgttgatggttcaagaaagcccatggaaa 186
>55075_zma-miR396d:pmrd
Length = 186
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 33 tccacaggctttcttgaactgtgaactcgtg 63
|||||||||||||||||||||||||||||||
Sbjct: 3 tccacaggctttcttgaactgtgaactcgtg 33
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 148 tgttgatggttcaagaaagtccttggaaa 176
||||||||||||||||||| || ||||||
Sbjct: 158 tgttgatggttcaagaaagcccatggaaa 186
>54488_sbi-miR396e:pmrd
Length = 189
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 33 tccacaggctttcttgaactgtgaactcgtg 63
|||||||||||||||||||||||||||||||
Sbjct: 3 tccacaggctttcttgaactgtgaactcgtg 33
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 148 tgttgatggttcaagaaagtccttggaaa 176
||||||||||||||||||| || ||||||
Sbjct: 160 tgttgatggttcaagaaagcccatggaaa 188
