miRNEST 2.0, an integrative microRNA resource :: BLAST
>54487_sbi-miR396c:pmrd
Length = 162
Score = 67.9 bits (34), Expect = 3e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 16 agtccatgccattcctttccacagctttcttgaacttc 53
|||||||||||| |||||||||||||||||||||||||
Sbjct: 5 agtccatgccatgcctttccacagctttcttgaacttc 42
Score = 60.0 bits (30), Expect = 7e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 143 ggtcaagaaagctgtgggaagaaatggcataaccagga 180
|||||||||||||||||||||||||| |||||| ||||
Sbjct: 125 ggtcaagaaagctgtgggaagaaatgacataacaagga 162
>48947_osa-miR396c:pmrd
Length = 141
Score = 65.9 bits (33), Expect = 1e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 135 aagaggagggtcaagaaagctgtgggaagaaatggca 171
|||| ||||||||||||||||||||||||||||||||
Sbjct: 105 aagaagagggtcaagaaagctgtgggaagaaatggca 141
Score = 56.0 bits (28), Expect = 1e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 22 tgccattcctttccacagctttcttgaacttc 53
|||||| |||||||||||||||||||||||||
Sbjct: 1 tgccatgcctttccacagctttcttgaacttc 32
>55078_zma-miR396g:pmrd
Length = 117
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 ctttccacagctttcttgaacttc 53
||||||||||||||||||||||||
Sbjct: 1 ctttccacagctttcttgaacttc 24
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 134 gaagaggagggtcaagaaagctgtgggaag 163
||||| || |||||||||||||||||||||
Sbjct: 88 gaagacgaaggtcaagaaagctgtgggaag 117
>55077_zma-miR396f:pmrd
Length = 166
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 ctttccacagctttcttgaacttc 53
||||||||||||||||||||||||
Sbjct: 1 ctttccacagctttcttgaacttc 24
>54869_vvi-miR396b:pmrd
Length = 108
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 22 tgccattcctttccacagctttcttgaacttc 53
|||||| | |||||||||||||||||||||||
Sbjct: 4 tgccatgcttttccacagctttcttgaacttc 35
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 34 ccacagctttcttgaacttc 53
||||||||||||||||||||
Sbjct: 95 ccacagctttcttgaacttc 76
>52893_ptc-miRf11071-akr:pmrd
Length = 148
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 31 tttccacagctttcttgaacttcc 54
||||||||||||||||||||||||
Sbjct: 143 tttccacagctttcttgaacttcc 120
>52304_ptc-miRf10482-akr:pmrd
Length = 102
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 31 tttccacagctttcttgaacttcc 54
||||||||||||||||||||||||
Sbjct: 94 tttccacagctttcttgaacttcc 71
>51737_ptc-miR396d:pmrd
Length = 154
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaacttcc 54
||||||||||||||||||||||||
Sbjct: 10 tttccacagctttcttgaacttcc 33
>51736_ptc-miR396c:pmrd
Length = 102
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaacttcc 54
||||||||||||||||||||||||
Sbjct: 10 tttccacagctttcttgaacttcc 33
>53179_ptc-miRf11357-akr:pmrd
Length = 141
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 31 tttccacagctttcttgaacttc 53
|||||||||||||||||||||||
Sbjct: 135 tttccacagctttcttgaacttc 113
>52080_ptc-miRf10258-akr:pmrd
Length = 141
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 31 tttccacagctttcttgaacttc 53
|||||||||||||||||||||||
Sbjct: 135 tttccacagctttcttgaacttc 113
>51738_ptc-miR396e:pmrd
Length = 145
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaacttc 53
|||||||||||||||||||||||
Sbjct: 10 tttccacagctttcttgaacttc 32
>48748_mtr-miR396a:pmrd
Length = 93
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaacttc 53
|||||||||||||||||||||||
Sbjct: 5 tttccacagctttcttgaacttc 27
>48580_gma-miR396c:pmrd
Length = 117
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaacttc 53
|||||||||||||||||||||||
Sbjct: 20 tttccacagctttcttgaacttc 42
>48579_gma-miR396b:pmrd
Length = 126
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaacttc 53
|||||||||||||||||||||||
Sbjct: 20 tttccacagctttcttgaacttc 42
>51564_pta-miR396:pmrd
Length = 119
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaactt 52
||||||||||||||||||||||
Sbjct: 16 tttccacagctttcttgaactt 37
>47009_ath-miR396b:pmrd
Length = 135
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaactt 52
||||||||||||||||||||||
Sbjct: 10 tttccacagctttcttgaactt 31
>54868_vvi-miR396a:pmrd
Length = 116
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tttccacagctttcttgaact 51
|||||||||||||||||||||
Sbjct: 13 tttccacagctttcttgaact 33
>48374_bna-miR396a:pmrd
Length = 117
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaactt 52
|||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactt 21
>46888_aqc-miR396b:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaactt 52
|||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactt 21
>55083_zma-miR396l:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>55082_zma-miR396k:pmrd
Length = 98
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>55081_zma-miR396j:pmrd
Length = 98
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>55080_zma-miR396i:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>55079_zma-miR396h:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 4 ttccacagctttcttgaact 23
>55074_zma-miR396c:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 4 ttccacagctttcttgaact 23
>55073_zma-miR396b:pmrd
Length = 136
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>55072_zma-miR396a:pmrd
Length = 137
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>54871_vvi-miR396d:pmrd
Length = 120
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>54870_vvi-miR396c:pmrd
Length = 108
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>54645_sof-miR396:pmrd
Length = 134
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>54584_smo-miR396:pmrd
Length = 168
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 34 ccacagctttcttgaacttc 53
||||||||||||||||||||
Sbjct: 153 ccacagctttcttgaacttc 134
>54486_sbi-miR396b:pmrd
Length = 128
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>54485_sbi-miR396a:pmrd
Length = 125
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>52079_ptc-miRf10257-akr:pmrd
Length = 130
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 9 ttccacagctttcttgaact 28
>51735_ptc-miR396b:pmrd
Length = 132
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>51734_ptc-miR396a:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>48946_osa-miR396b:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>48945_osa-miR396a:pmrd
Length = 154
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>48680_lja-miR396:pmrd
Length = 108
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaact 35
>48578_gma-miR396a:pmrd
Length = 140
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>48508_ghr-miR396c:pmrd
Length = 115
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>48507_ghr-miR396b:pmrd
Length = 115
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>48485_gcl-miR396a:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 101 ttccacagctttcttgaact 82
>48110_ath-miRf11010-akr:pmrd
Length = 165
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 18 ttccacagctttcttgaact 37
>47008_ath-miR396a:pmrd
Length = 151
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>46887_aqc-miR396a:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 32 ttccacagctttcttgaact 51
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
