miRNEST 2.0, an integrative microRNA resource :: BLAST
>48948_osa-miR396d:pmrd
Length = 142
Score = 103 bits (52), Expect = 4e-23
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 2 agatgcgcgggcatgctttccacaggctttcttgaactgtgaactcgtgggggtgt 57
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 agatgtgcgggcatgctttccacaggctttcttgaactgtgaactcgtgggggtgt 58
>48951_osa-miR396e:pmrd
Length = 184
Score = 99.6 bits (50), Expect = 6e-22
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 8 gcgggcatgctttccacaggctttcttgaactgtgaactcgtgggggtgt 57
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgggcatgctttccacaggctttcttgaactgtgaactcgtgggggtgt 50
Score = 79.8 bits (40), Expect = 6e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 116 cctgttgatggttcaagaaagcccatggaaaccatgccgc 155
||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 cctgttgatggttcaagaaagcccatggaaaccatgccgc 184
>48950_osa-miR396e:pmrd
Length = 184
Score = 99.6 bits (50), Expect = 6e-22
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 8 gcgggcatgctttccacaggctttcttgaactgtgaactcgtgggggtgt 57
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgggcatgctttccacaggctttcttgaactgtgaactcgtgggggtgt 50
Score = 79.8 bits (40), Expect = 6e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 116 cctgttgatggttcaagaaagcccatggaaaccatgccgc 155
||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 cctgttgatggttcaagaaagcccatggaaaccatgccgc 184
>48949_osa-miR396e:pmrd
Length = 184
Score = 99.6 bits (50), Expect = 6e-22
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 8 gcgggcatgctttccacaggctttcttgaactgtgaactcgtgggggtgt 57
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgggcatgctttccacaggctttcttgaactgtgaactcgtgggggtgt 50
Score = 79.8 bits (40), Expect = 6e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 116 cctgttgatggttcaagaaagcccatggaaaccatgccgc 155
||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 cctgttgatggttcaagaaagcccatggaaaccatgccgc 184
>54488_sbi-miR396e:pmrd
Length = 189
Score = 75.8 bits (38), Expect = 9e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 18 tttccacaggctttcttgaactgtgaactcgtgggggt 55
||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttccacaggctttcttgaactgtgaactcgtgggggt 38
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 116 cctgttgatggttcaagaaagcccatggaaac 147
||||||||||||||||||||||||||||||||
Sbjct: 158 cctgttgatggttcaagaaagcccatggaaac 189
>55085_zma-miR396n:pmrd
Length = 186
Score = 69.9 bits (35), Expect = 6e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 18 tttccacaggctttcttgaactgtgaactcgtggg 52
|||||||||||||||||||||||||||||||||||
Sbjct: 1 tttccacaggctttcttgaactgtgaactcgtggg 35
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 116 cctgttgatggttcaagaaagcccatggaaa 146
|||||||||||||||||||||||||||||||
Sbjct: 156 cctgttgatggttcaagaaagcccatggaaa 186
>55084_zma-miR396m:pmrd
Length = 227
Score = 69.9 bits (35), Expect = 6e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 18 tttccacaggctttcttgaactgtgaactcgtggg 52
|||||||||||||||||||||||||||||||||||
Sbjct: 1 tttccacaggctttcttgaactgtgaactcgtggg 35
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 116 cctgttgatggttcaagaaagcccatggaaa 146
|||||||||||||||||||||||||||||||
Sbjct: 197 cctgttgatggttcaagaaagcccatggaaa 227
>55076_zma-miR396e:pmrd
Length = 186
Score = 69.9 bits (35), Expect = 6e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 18 tttccacaggctttcttgaactgtgaactcgtggg 52
|||||||||||||||||||||||||||||||||||
Sbjct: 1 tttccacaggctttcttgaactgtgaactcgtggg 35
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 116 cctgttgatggttcaagaaagcccatggaaa 146
|||||||||||||||||||||||||||||||
Sbjct: 156 cctgttgatggttcaagaaagcccatggaaa 186
>55075_zma-miR396d:pmrd
Length = 186
Score = 69.9 bits (35), Expect = 6e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 18 tttccacaggctttcttgaactgtgaactcgtggg 52
|||||||||||||||||||||||||||||||||||
Sbjct: 1 tttccacaggctttcttgaactgtgaactcgtggg 35
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 116 cctgttgatggttcaagaaagcccatggaaa 146
|||||||||||||||||||||||||||||||
Sbjct: 156 cctgttgatggttcaagaaagcccatggaaa 186
>48954_osa-miR396f:pmrd
Length = 176
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 13 catgctttccacaggctttcttgaactgtgaactcgtg 50
|||||| |||||||||||||||||||||||||||||||
Sbjct: 3 catgctctccacaggctttcttgaactgtgaactcgtg 40
>48953_osa-miR396f:pmrd
Length = 176
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 13 catgctttccacaggctttcttgaactgtgaactcgtg 50
|||||| |||||||||||||||||||||||||||||||
Sbjct: 3 catgctctccacaggctttcttgaactgtgaactcgtg 40
>48952_osa-miR396f:pmrd
Length = 176
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 13 catgctttccacaggctttcttgaactgtgaactcgtg 50
|||||| |||||||||||||||||||||||||||||||
Sbjct: 3 catgctctccacaggctttcttgaactgtgaactcgtg 40
>48797_oru-miR396:pmrd
Length = 178
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 13 catgctttccacaggctttcttgaactgtgaactcgtg 50
|||||| |||||||||||||||||||||||||||||||
Sbjct: 4 catgctctccacaggctttcttgaactgtgaactcgtg 41
>48480_far-miR396:pmrd
Length = 99
Score = 67.9 bits (34), Expect = 2e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 7 cgcgggcatgctttccacaggctttcttgaactgtgaactcg 48
||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 5 cgcggccatgctctccacaggctttcttgaactgtgaactcg 46
>48651_hvu-miR396:pmrd
Length = 107
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 8 gcgggcatgctttccacaggctttcttgaactgtgaactcg 48
|||| |||||| |||||||||||||||||||||| ||||||
Sbjct: 1 gcggccatgctctccacaggctttcttgaactgtcaactcg 41
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 119 gttgatggttcaagaaagcccatggaaaccatgcc 153
|||||||||||||||||| || |||||| ||||||
Sbjct: 70 gttgatggttcaagaaagtccttggaaaacatgcc 104
>48956_osa-miR396h:pmrd
Length = 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tttccacaggctttcttgaac 38
|||||||||||||||||||||
Sbjct: 109 tttccacaggctttcttgaac 129
>48955_osa-miR396g:pmrd
Length = 181
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tttccacaggctttcttgaac 38
|||||||||||||||||||||
Sbjct: 149 tttccacaggctttcttgaac 169
>48957_osa-miR396i:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ttccacaggctttcttgaac 38
||||||||||||||||||||
Sbjct: 90 ttccacaggctttcttgaac 109
>48506_ghr-miR396a:pmrd
Length = 87
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ttccacaggctttcttgaac 38
||||||||||||||||||||
Sbjct: 66 ttccacaggctttcttgaac 85
