miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48318_bdi-miR437:pmrd
Length = 141
Score = 280 bits (141), Expect = 3e-76
Identities = 141/141 (100%)
Strand = Plus / Plus
Query: 1 taaagacaatatgaatacatatatttcattatggataaaatgaaactaatttggtgtcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taaagacaatatgaatacatatatttcattatggataaaatgaaactaatttggtgtcat 60
Query: 61 aagtcttggtatatttgtctaaaagattggtcgaacttagagaagtttgacttaagacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagtcttggtatatttgtctaaaagattggtcgaacttagagaagtttgacttaagacaa 120
Query: 121 acataaatgttgtactccctc 141
|||||||||||||||||||||
Sbjct: 121 acataaatgttgtactccctc 141
>54507_sbi-miR437k:pmrd
Length = 172
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 71 atatttgtctaaaagattggtcgaacttagagaagtttgactta 114
|||||| ||||||| |||||| || ||||||||||||||||||
Sbjct: 128 atatttttctaaaaacttggtcaaagttagagaagtttgactta 171
Score = 44.1 bits (22), Expect = 3e-05
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 66 ttggtatatttgtctaaaagattggtcgaacttagagaagtttgac 111
||||| ||||| |||| ||| |||||| || |||||||||||||||
Sbjct: 48 ttggtgtatttttctataagtttggtcaaagttagagaagtttgac 3
>54517_sbi-miR437u:pmrd
Length = 164
Score = 46.1 bits (23), Expect = 7e-06
Identities = 62/75 (82%)
Strand = Plus / Plus
Query: 39 aatgaaactaatttggtgtcataagtcttggtatatttgtctaaaagattggtcgaactt 98
||||||||||||||| ||||||| | |||| ||||| |||| || ||||| || ||
Sbjct: 90 aatgaaactaatttgatgtcatagatattggcgtatttttctataaacttggtgaaagtt 149
Query: 99 agagaagtttgactt 113
|||||||||||||||
Sbjct: 150 agagaagtttgactt 164
>48988_osa-miR437:pmrd
Length = 213
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 87 ttggtcgaacttagagaagtttgacttaagacaaa 121
|||||| || |||||||||||||||||| ||||||
Sbjct: 149 ttggtcaaagttagagaagtttgacttaggacaaa 183
>48987_osa-miR437:pmrd
Length = 213
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 87 ttggtcgaacttagagaagtttgacttaagacaaa 121
|||||| || |||||||||||||||||| ||||||
Sbjct: 149 ttggtcaaagttagagaagtttgacttaggacaaa 183
>48986_osa-miR437:pmrd
Length = 213
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 87 ttggtcgaacttagagaagtttgacttaagacaaa 121
|||||| || |||||||||||||||||| ||||||
Sbjct: 149 ttggtcaaagttagagaagtttgacttaggacaaa 183
>55109_zma-miR437c:pmrd
Length = 177
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 70 tatatttgtctaaaagattggtcgaacttagagaagtttgac 111
||||||| || ||||| |||||| || |||||||||||||||
Sbjct: 136 tatatttttcaaaaagcttggtcaaagttagagaagtttgac 177
>55112_zma-miR437f:pmrd
Length = 342
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 87 ttggtcgaacttagagaagtttgactta 114
|||||| || ||||||||||||||||||
Sbjct: 28 ttggtcaaagttagagaagtttgactta 1
>55111_zma-miR437e:pmrd
Length = 182
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 87 ttggtcgaacttagagaagtttgactta 114
||||||||| ||| ||||||||||||||
Sbjct: 154 ttggtcgaagttaaagaagtttgactta 181
>55107_zma-miR437a:pmrd
Length = 342
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 87 ttggtcgaacttagagaagtttgactta 114
|||||| || ||||||||||||||||||
Sbjct: 315 ttggtcaaagttagagaagtttgactta 342
>54512_sbi-miR437p:pmrd
Length = 188
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 87 ttggtcgaacttagagaagtttgactta 114
|||||| || ||||||||||||||||||
Sbjct: 160 ttggtcaaagttagagaagtttgactta 187
>54508_sbi-miR437l:pmrd
Length = 170
Score = 40.1 bits (20), Expect = 4e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 70 tatatttgtctaaaagattggtcgaacttagagaagtttgactt 113
||||||| ||||||| |||| | || |||||||||||||||||
Sbjct: 127 tatatttttctaaaaacttggccaaagttagagaagtttgactt 170
>54504_sbi-miR437g:pmrd
Length = 176
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 87 ttggtcgaacttagagaagtttgactta 114
|||||| || ||||||||||||||||||
Sbjct: 148 ttggtcaaagttagagaagtttgactta 175
>54503_sbi-miR437f:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 87 ttggtcgaacttagagaagtttgactta 114
|||||| || ||||||||||||||||||
Sbjct: 146 ttggtcaaagttagagaagtttgactta 173
>54502_sbi-miR437e:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 4e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 70 tatatttgtctaaaagattggtcgaacttagagaagtttgactt 113
||||||| ||| ||| |||||| || |||||||||||||||||
Sbjct: 58 tatatttttctgaaaacttggtcaaagttagagaagtttgactt 101
