miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>49020_osa-miR529b:pmrd
Length = 138
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 67 caaggctgtaccctctctcttcttctcttagctt 100
||||||||||| ||| ||||||||||||||||||
Sbjct: 97 caaggctgtacgctccctcttcttctcttagctt 130
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 5 aaggttaaagggagaagagagagagtacagc 35
|||| |||| |||||||||||||||||||||
Sbjct: 7 aaggctaaatggagaagagagagagtacagc 37
>49019_osa-miR529a:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 68 aaggctgtaccctctctcttcttc 91
||||||||||||||||||||||||
Sbjct: 76 aaggctgtaccctctctcttcttc 99
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 agaagagagagagtacagcctta 39
|||||||||||||||||||||||
Sbjct: 3 agaagagagagagtacagcctta 25
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 68 aaggctgtaccctctctcttcttc 91
|||||||||| |||||||||||||
Sbjct: 24 aaggctgtactctctctcttcttc 1
>51411_ppt-miR529f:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 agaagagagagagtacagcc 36
||||||||||||||||||||
Sbjct: 30 agaagagagagagtacagcc 49
>51410_ppt-miR529e:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 agaagagagagagtacagcc 36
||||||||||||||||||||
Sbjct: 30 agaagagagagagtacagcc 49
