miRNEST 2.0, an integrative microRNA resource :: BLAST
>54392_sar-miR159:pmrd
Length = 175
Score = 331 bits (167), Expect = 1e-91
Identities = 173/175 (98%)
Strand = Plus / Plus
Query: 15 tggagctcctatcattccaatgaaaggtcttgctaggaggggtggtacagctgctcgttc 74
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 tggagctcctatcattccaatgaaaggtcttgctagaaggggtggtacagctgctcgttc 60
Query: 75 atggttcccactatcctacctccgtttgaaaccagggagataggcctgtggctagcatga 134
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 atggttcccactatcctacctccgtttgaaaccagggagataggcctgtggcttgcatga 120
Query: 135 ccgaggagccgcatcgtcccctcgctggccgctctttggattgaagggagctctg 189
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccgaggagccgcatcgtcccctcgctggccgctctttggattgaagggagctctg 175
>54673_tae-miR159a:pmrd
Length = 177
Score = 149 bits (75), Expect = 9e-37
Identities = 155/179 (86%), Gaps = 2/179 (1%)
Strand = Plus / Plus
Query: 14 gtggagctcctatcattccaatgaaaggtcttgctaggaggggtggtacagctgctcgtt 73
||||||||||||||||||||||||| ||||| | | |||| | || ||||||||||||
Sbjct: 1 gtggagctcctatcattccaatgaagggtctaccg-gaagggtttgtgcagctgctcgtt 59
Query: 74 catggttcccactatcctacctccgtttgaaaccagggagataggcctgtggctagcatg 133
||||||||||||||||||| |||| | |||| | ||||| |||||||||| | |||||
Sbjct: 60 catggttcccactatcctatctcc-atagaaaacgaggagagaggcctgtggtttgcatg 118
Query: 134 accgaggagccgcatcgtcccctcgctggccgctctttggattgaagggagctctgcat 192
||||||||||||| ||| ||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 119 accgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgcat 177
>48657_hvv-miR159b:pmrd
Length = 174
Score = 133 bits (67), Expect = 6e-32
Identities = 149/175 (85%), Gaps = 1/175 (0%)
Strand = Plus / Plus
Query: 15 tggagctcctatcattccaatgaaaggtcttgctaggaggggtggtacagctgctcgttc 74
|||||||||||||||||||||||| ||||| | | |||| | || |||||||| ||||
Sbjct: 1 tggagctcctatcattccaatgaagggtctaccg-gaagggtttgtgcagctgcttgttc 59
Query: 75 atggttcccactatcctacctccgtttgaaaccagggagataggcctgtggctagcatga 134
|||||||||||||||||| |||| || ||| | |||||||||| ||||| | ||||||
Sbjct: 60 atggttcccactatcctatctccattagaacacgaggagataggcttgtggtttgcatga 119
Query: 135 ccgaggagccgcatcgtcccctcgctggccgctctttggattgaagggagctctg 189
||||||||||| ||| ||||||||| ||||| |||||||||||||||||||||
Sbjct: 120 tcgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctg 174
>54629_sof-miR159b:pmrd
Length = 266
Score = 117 bits (59), Expect = 3e-27
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 111 gagataggcctgtggctagcatgaccgaggagccgcatcgtcccctcgctggccgctctt 170
||||||||| ||||| | ||||||||||||||| ||| |||||||| |||||||||||||
Sbjct: 169 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 228
Query: 171 tggattgaagggagctctgcatc 193
|||||||||||||||||||||||
Sbjct: 229 tggattgaagggagctctgcatc 251
Score = 77.8 bits (39), Expect = 3e-15
Identities = 78/90 (86%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 3 ttggttttgaggtggagctcctatcattccaatgaaaggtcttgctaggaggggtggtac 62
|||| ||||| | ||||||||||||||||||||||| || | | || || ||||||| |
Sbjct: 9 ttggatttgaagcggagctcctatcattccaatgaagggccgttct--gaagggtggttc 66
Query: 63 agctgctcgttcatggttcccactatccta 92
|||||||||||||||||||||||||||||
Sbjct: 67 cgctgctcgttcatggttcccactatccta 96
>54628_sof-miR159a:pmrd
Length = 265
Score = 117 bits (59), Expect = 3e-27
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 111 gagataggcctgtggctagcatgaccgaggagccgcatcgtcccctcgctggccgctctt 170
||||||||| ||||| | ||||||||||||||| ||| |||||||| |||||||||||||
Sbjct: 168 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 227
Query: 171 tggattgaagggagctctgcatc 193
|||||||||||||||||||||||
Sbjct: 228 tggattgaagggagctctgcatc 250
Score = 69.9 bits (35), Expect = 7e-13
Identities = 77/90 (85%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 3 ttggttttgaggtggagctcctatcattccaatgaaaggtcttgctaggaggggtggtac 62
|||| ||||| | ||||||||||||||||||||||| || | | || || |||| || |
Sbjct: 9 ttggatttgaagcggagctcctatcattccaatgaagggccgttct--gaagggttgttc 66
Query: 63 agctgctcgttcatggttcccactatccta 92
|||||||||||||||||||||||||||||
Sbjct: 67 cgctgctcgttcatggttcccactatccta 96
>51338_pgl-miR159:pmrd
Length = 226
Score = 117 bits (59), Expect = 3e-27
Identities = 74/79 (93%)
Strand = Plus / Plus
Query: 111 gagataggcctgtggctagcatgaccgaggagccgcatcgtcccctcgctggccgctctt 170
||||||||| ||||||| ||||||||||||||| ||| |||||||| |||||||||||||
Sbjct: 148 gagataggcttgtggcttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 207
Query: 171 tggattgaagggagctctg 189
|||||||||||||||||||
Sbjct: 208 tggattgaagggagctctg 226
Score = 81.8 bits (41), Expect = 2e-16
Identities = 69/77 (89%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 16 ggagctcctatcattccaatgaaaggtcttgctaggaggggtggtacagctgctcgttca 75
||||||||||||||||||||||||||| | | | ||| |||||||||||||||||||
Sbjct: 2 ggagctcctatcattccaatgaaaggttgtttttgt-gggttggtacagctgctcgttca 60
Query: 76 tggttcccactatccta 92
|||||||||||||||||
Sbjct: 61 tggttcccactatccta 77
>54930_zma-miR159a:pmrd
Length = 246
Score = 109 bits (55), Expect = 8e-25
Identities = 76/83 (91%)
Strand = Plus / Plus
Query: 111 gagataggcctgtggctagcatgaccgaggagccgcatcgtcccctcgctggccgctctt 170
||||||||| ||||| | ||||||||||||||| ||| || ||||| |||||||||||||
Sbjct: 149 gagataggcttgtggtttgcatgaccgaggagctgcaccgcccccttgctggccgctctt 208
Query: 171 tggattgaagggagctctgcatc 193
|||||||||||||||||||||||
Sbjct: 209 tggattgaagggagctctgcatc 231
Score = 77.8 bits (39), Expect = 3e-15
Identities = 79/91 (86%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 2 tttggttttgaggtggagctcctatcattccaatgaaaggtcttgctaggaggggtggta 61
||||| ||||| | ||||||||||||||||||||||| |||| | | | |||| ||||
Sbjct: 8 tttgggtttgaagcggagctcctatcattccaatgaagggtcgttcc-gaagggctggtt 66
Query: 62 cagctgctcgttcatggttcccactatccta 92
| |||||||||||||||||||||||||||||
Sbjct: 67 ccgctgctcgttcatggttcccactatccta 97
>54631_sof-miR159d:pmrd
Length = 265
Score = 101 bits (51), Expect = 2e-22
Identities = 75/83 (90%)
Strand = Plus / Plus
Query: 111 gagataggcctgtggctagcatgaccgaggagccgcatcgtcccctcgctggccgctctt 170
|||||| || ||||| | |||||||||| |||| ||| |||||||| |||||||||||||
Sbjct: 168 gagatacgcttgtggtttgcatgaccgatgagctgcaccgtccccttgctggccgctctt 227
Query: 171 tggattgaagggagctctgcatc 193
|||||||||||||||||||||||
Sbjct: 228 tggattgaagggagctctgcatc 250
Score = 69.9 bits (35), Expect = 7e-13
Identities = 77/90 (85%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 3 ttggttttgaggtggagctcctatcattccaatgaaaggtcttgctaggaggggtggtac 62
|||| ||||| | ||||||||||||||||||||||| || | | || || |||| || |
Sbjct: 9 ttggatttgaagcggagctcctatcattccaatgaagggccgttct--gaagggttgttc 66
Query: 63 agctgctcgttcatggttcccactatccta 92
|||||||||||||||||||||||||||||
Sbjct: 67 cgctgctcgttcatggttcccactatccta 96
>48820_osa-miR159b:pmrd
Length = 188
Score = 95.6 bits (48), Expect = 1e-20
Identities = 158/192 (82%), Gaps = 7/192 (3%)
Strand = Plus / Plus
Query: 5 ggttttgaggtggagctcctatcattccaatgaaaggtcttgctaggaggggtggtacag 64
|||| ||| ||||||||||| || |||||||||||||| | || || ||||| |||||
Sbjct: 1 ggttatgaagtggagctcctttcgttccaatgaaaggtttatct--gaagggtgatacag 58
Query: 65 ctgctcgttcatggttcccactatcctacctccgtttgaaaccagggagataggcctgtg 124
||||| |||||||||||||||||| ||| ||| | |||| ||||||||| ||||
Sbjct: 59 ctgcttgttcatggttcccactattctatctca-taggaaaa----gagataggcttgtg 113
Query: 125 gctagcatgaccgaggagccgcatcgtcccctcgctggccgctctttggattgaagggag 184
| | |||||||| |||||||| ||| | ||| |||| || |||||||||||||||||||
Sbjct: 114 gtttgcatgaccaaggagccgaatcaactccttgctgaccactctttggattgaagggag 173
Query: 185 ctctgcatcttg 196
||||||||||||
Sbjct: 174 ctctgcatcttg 185
>54632_sof-miR159e:pmrd
Length = 264
Score = 91.7 bits (46), Expect = 2e-19
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 111 gagataggcctgtggctagcatgaccgaggagccgcatcgtcccctcgctggccgctctt 170
||||||||| ||||| | |||||||||| |||| ||| |||||||| |||||||||||||
Sbjct: 167 gagataggcttgtggtttgcatgaccgaagagctgcaccgtccccttgctggccgctctt 226
Query: 171 tggattgaagggagctct 188
||||||||| ||||||||
Sbjct: 227 tggattgaaaggagctct 244
Score = 77.8 bits (39), Expect = 3e-15
Identities = 78/90 (86%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 3 ttggttttgaggtggagctcctatcattccaatgaaaggtcttgctaggaggggtggtac 62
|||| ||||| | ||||||||||||||||||||||| || | | || || ||||||| |
Sbjct: 8 ttggatttgaagcggagctcctatcattccaatgaagggccgttct--gaagggtggttc 65
Query: 63 agctgctcgttcatggttcccactatccta 92
|||||||||||||||||||||||||||||
Sbjct: 66 cgctgctcgttcatggttcccactatccta 95
>54931_zma-miR159b:pmrd
Length = 221
Score = 79.8 bits (40), Expect = 7e-16
Identities = 78/88 (88%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 111 gagataggcctgtggctagcatgaccgaggagccgcatcgtcccct-cgctggccgctct 169
||||| ||| ||||| | ||||||||||||||| ||| |||||||| || || ||||| |
Sbjct: 124 gagatgggcttgtggtttgcatgaccgaggagctgca-cgtccccttcgttgaccgctgt 182
Query: 170 ttggattgaagggagctctgcatcttgg 197
||||||||||||||||||||||||||||
Sbjct: 183 ttggattgaagggagctctgcatcttgg 210
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 54 gggtggtacagctgctcgttcatggttcccact 86
|||||||||||||||||||||||||||||||||
Sbjct: 58 gggtggtacagctgctcgttcatggttcccact 90
>54934_zma-miR159e:pmrd
Length = 203
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 54 gggtggtacagctgctcgttcatggttcccact 86
|||||||||||||||||||||||||||||||||
Sbjct: 40 gggtggtacagctgctcgttcatggttcccact 72
Score = 65.9 bits (33), Expect = 1e-11
Identities = 70/81 (86%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 111 gagataggcctgtggctagcatgaccgaggagccgcatcgtcccc-tcgctggccgctct 169
||||| ||| ||||| | ||||||||||||||| || |||||||| ||| || ||||| |
Sbjct: 123 gagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgt 182
Query: 170 ttggattgaagggagctctgc 190
||||| |||||||||||||||
Sbjct: 183 ttggagtgaagggagctctgc 203
>48819_osa-miR159a:pmrd
Length = 272
Score = 60.0 bits (30), Expect = 7e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 166 ctctttggattgaagggagctctgcatctt 195
||||||||||||||||||||||||||||||
Sbjct: 239 ctctttggattgaagggagctctgcatctt 268
>48796_oru-miR159:pmrd
Length = 274
Score = 60.0 bits (30), Expect = 7e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 166 ctctttggattgaagggagctctgcatctt 195
||||||||||||||||||||||||||||||
Sbjct: 239 ctctttggattgaagggagctctgcatctt 268
>54674_tae-miR159b:pmrd
Length = 255
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 166 ctctttggattgaagggagctctgcatct 194
|||||||||||||||||||||||||||||
Sbjct: 227 ctctttggattgaagggagctctgcatct 255
>48656_hvv-miR159a:pmrd
Length = 303
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctgcatcttg 196
||||||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgcatcttg 28
>54937_zma-miR159m:pmrd
Length = 457
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctgcatc 193
|||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgcatc 25
>54653_spr-miR159:pmrd
Length = 392
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctgcatc 193
|||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgcatc 25
>48825_osa-miR159m:pmrd
Length = 249
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 166 ctctttggattgaagggagctctg 189
||||||||||||||||||||||||
Sbjct: 226 ctctttggattgaagggagctctg 249
>48701_mtr-miR159c:pmrd
Length = 44
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctgcatcttg 196
|||||||||||||||||||| |||||||
Sbjct: 1 tttggattgaagggagctctacatcttg 28
>46932_ath-miR159b:pmrd
Length = 196
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 167 tctttggattgaagggagctctgcatct 194
|||||||||||||||||||||| |||||
Sbjct: 166 tctttggattgaagggagctcttcatct 193
>48728_mtr-miR319b:pmrd
Length = 42
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 170 ttggattgaagggagctctgcatcttg 196
||||||||||||||||||| |||||||
Sbjct: 1 ttggattgaagggagctctacatcttg 27
>54378_pvu-miR159:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 167 tctttggattgaagggagctct 188
||||||||||||||||||||||
Sbjct: 151 tctttggattgaagggagctct 172
>54377_pvu-miR159:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 167 tctttggattgaagggagctct 188
||||||||||||||||||||||
Sbjct: 151 tctttggattgaagggagctct 172
>48699_mtr-miR159a:pmrd
Length = 168
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 167 tctttggattgaagggagctct 188
||||||||||||||||||||||
Sbjct: 146 tctttggattgaagggagctct 167
>48539_gma-miR159a:pmrd
Length = 214
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 167 tctttggattgaagggagctct 188
||||||||||||||||||||||
Sbjct: 173 tctttggattgaagggagctct 194
>48395_bra-miR159a:pmrd
Length = 185
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 167 tctttggattgaagggagctct 188
||||||||||||||||||||||
Sbjct: 161 tctttggattgaagggagctct 182
>48339_bna-miR159:pmrd
Length = 183
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 167 tctttggattgaagggagctct 188
||||||||||||||||||||||
Sbjct: 159 tctttggattgaagggagctct 180
>46931_ath-miR159a:pmrd
Length = 184
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 167 tctttggattgaagggagctct 188
||||||||||||||||||||||
Sbjct: 161 tctttggattgaagggagctct 182
>54777_vvi-miR159c:pmrd
Length = 190
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctct 188
||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctct 179
>54540_sly-miR159:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctct 188
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctct 188
||||||||||||||||||||
Sbjct: 149 tttggattgaagggagctct 168
>51604_ptc-miR159c:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctct 188
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>51603_ptc-miR159b:pmrd
Length = 187
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctct 188
||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctct 177
>51602_ptc-miR159a:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctct 188
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>48686_ltu-miR159:pmrd
Length = 345
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctct 188
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
