miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48838_osa-miR164a:pmrd
Length = 156
Score = 309 bits (156), Expect = 3e-85
Identities = 156/156 (100%)
Strand = Plus / Plus
Query: 1 gtgagaaggaccgcgttggagaagcagggcacgtgcatgcatatgttcatcatcatcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgagaaggaccgcgttggagaagcagggcacgtgcatgcatatgttcatcatcatcttc 60
Query: 61 ttcctcctcctctagctccagccttgtgtgggttggaagtttagatagaactcgcactgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcctcctcctctagctccagccttgtgtgggttggaagtttagatagaactcgcactgc 120
Query: 121 acgtggtctccttctccatcccggtctttttctcac 156
||||||||||||||||||||||||||||||||||||
Sbjct: 121 acgtggtctccttctccatcccggtctttttctcac 156
>50414_osa-miRf11199-akr:pmrd
Length = 146
Score = 289 bits (146), Expect = 3e-79
Identities = 146/146 (100%)
Strand = Plus / Plus
Query: 5 gaaggaccgcgttggagaagcagggcacgtgcatgcatatgttcatcatcatcttcttcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaggaccgcgttggagaagcagggcacgtgcatgcatatgttcatcatcatcttcttcc 60
Query: 65 tcctcctctagctccagccttgtgtgggttggaagtttagatagaactcgcactgcacgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcctcctctagctccagccttgtgtgggttggaagtttagatagaactcgcactgcacgt 120
Query: 125 ggtctccttctccatcccggtctttt 150
||||||||||||||||||||||||||
Sbjct: 121 ggtctccttctccatcccggtctttt 146
>54952_zma-miR164d:pmrd
Length = 216
Score = 65.9 bits (33), Expect = 8e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 gtgagaaggaccgcgttggagaagcagggcacgtgcatgca 41
|||||||||||| || |||||||||||||||||||||||||
Sbjct: 4 gtgagaaggaccacgctggagaagcagggcacgtgcatgca 44
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 119 gcacgtggtctccttctccatcccggt 145
|||||||||||||||||||||| ||||
Sbjct: 177 gcacgtggtctccttctccatcacggt 203
>54949_zma-miR164a:pmrd
Length = 152
Score = 56.0 bits (28), Expect = 8e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1 gtgagaaggaccgcgttggagaagcagggcacgtgcatgc 40
|||| ||||||| || ||||||||||||||||||||||||
Sbjct: 3 gtgacaaggaccacgctggagaagcagggcacgtgcatgc 42
>54954_zma-miR164f:pmrd
Length = 177
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgcatgca 41
|||||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcatgca 25
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 gcacgtggtctccttctcca 138
||||||||||||||||||||
Sbjct: 158 gcacgtggtctccttctcca 177
>54955_zma-miR164g:pmrd
Length = 116
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgcatgc 40
||||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcatgc 24
>54413_sbi-miR164d:pmrd
Length = 160
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgcatgc 40
||||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcatgc 24
>48398_bra-miR164a:pmrd
Length = 92
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 cgttggagaagcagggcacgtgca 37
||||||||||||||||||||||||
Sbjct: 7 cgttggagaagcagggcacgtgca 30
>48341_bna-miR164:pmrd
Length = 86
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 cgttggagaagcagggcacgtgca 37
||||||||||||||||||||||||
Sbjct: 4 cgttggagaagcagggcacgtgca 27
>54951_zma-miR164c:pmrd
Length = 270
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 12 cgcgttggagaagcagggcacgtgcat 38
|||| ||||||||||||||||||||||
Sbjct: 13 cgcggtggagaagcagggcacgtgcat 39
>54785_vvi-miR164a:pmrd
Length = 121
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 gttggagaagcagggcacgtgca 37
|||||||||||||||||||||||
Sbjct: 9 gttggagaagcagggcacgtgca 31
>54414_sbi-miR164e:pmrd
Length = 205
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 gttggagaagcagggcacgtgca 37
|||||||||||||||||||||||
Sbjct: 1 gttggagaagcagggcacgtgca 23
>48710_mtr-miR164c:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 gttggagaagcagggcacgtgca 37
|||||||||||||||||||||||
Sbjct: 4 gttggagaagcagggcacgtgca 26
>48708_mtr-miR164a:pmrd
Length = 99
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 gttggagaagcagggcacgtgca 37
|||||||||||||||||||||||
Sbjct: 4 gttggagaagcagggcacgtgca 26
>48547_gma-miR164:pmrd
Length = 95
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 gttggagaagcagggcacgtgca 37
|||||||||||||||||||||||
Sbjct: 9 gttggagaagcagggcacgtgca 31
>48419_cav-miR164:pmrd
Length = 95
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 gttggagaagcagggcacgtgca 37
|||||||||||||||||||||||
Sbjct: 9 gttggagaagcagggcacgtgca 31
>47540_ath-miRf10440-akr:pmrd
Length = 113
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 gttggagaagcagggcacgtgca 37
|||||||||||||||||||||||
Sbjct: 97 gttggagaagcagggcacgtgca 75
>47539_ath-miRf10439-akr:pmrd
Length = 115
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 gttggagaagcagggcacgtgca 37
|||||||||||||||||||||||
Sbjct: 98 gttggagaagcagggcacgtgca 76
>46940_ath-miR164a:pmrd
Length = 113
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 gttggagaagcagggcacgtgca 37
|||||||||||||||||||||||
Sbjct: 17 gttggagaagcagggcacgtgca 39
>54956_zma-miR164h:pmrd
Length = 96
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgcat 38
||||||||||||||||||||||
Sbjct: 4 tggagaagcagggcacgtgcat 25
>54953_zma-miR164e:pmrd
Length = 242
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgcat 38
||||||||||||||||||||||
Sbjct: 4 tggagaagcagggcacgtgcat 25
>54950_zma-miR164b:pmrd
Length = 128
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgcat 38
||||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgcat 42
>54787_vvi-miR164c:pmrd
Length = 97
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgcat 38
||||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgcat 32
>54676_tae-miR164b:pmrd
Length = 152
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgcat 38
||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcat 22
>54410_sbi-miR164:pmrd
Length = 126
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgcat 38
||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcat 22
>53142_ptc-miRf11320-akr:pmrd
Length = 167
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgcat 38
||||||||||||||||||||||
Sbjct: 15 tggagaagcagggcacgtgcat 36
>51623_ptc-miR164e:pmrd
Length = 155
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgcat 38
||||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgcat 32
>51348_ppl-miR164:pmrd
Length = 159
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgcat 38
||||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgcat 32
>48843_osa-miR164f:pmrd
Length = 210
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgcat 38
||||||||||||||||||||||
Sbjct: 24 tggagaagcagggcacgtgcat 45
>48839_osa-miR164b:pmrd
Length = 109
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgcat 38
||||||||||||||||||||||
Sbjct: 9 tggagaagcagggcacgtgcat 30
>48473_csi-miR164:pmrd
Length = 168
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgcat 38
||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcat 22
>47347_ath-miRf10247-akr:pmrd
Length = 159
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgcat 38
||||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgcat 27
>46941_ath-miR164b:pmrd
Length = 153
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgcat 38
||||||||||||||||||||||
Sbjct: 3 tggagaagcagggcacgtgcat 24
>54788_vvi-miR164d:pmrd
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgca 37
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>52901_ptc-miRf11079-akr:pmrd
Length = 171
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgca 37
|||||||||||||||||||||
Sbjct: 15 tggagaagcagggcacgtgca 35
>51862_ptc-miRf10040-akr:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 17 tggagaagcagggcacgtgca 37
|||||||||||||||||||||
Sbjct: 77 tggagaagcagggcacgtgca 57
>51622_ptc-miR164d:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgca 37
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>51621_ptc-miR164c:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgca 37
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>51620_ptc-miR164b:pmrd
Length = 162
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgca 37
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>51619_ptc-miR164a:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgca 37
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>48709_mtr-miR164b:pmrd
Length = 144
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgca 37
|||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgca 26
>54411_sbi-miR164b:pmrd
Length = 111
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgc 36
||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgc 40
>48841_osa-miR164d:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgc 36
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>46942_ath-miR164c:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 tggagaagcagggcacgtgc 36
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
