miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48844_osa-miR166a:pmrd
Length = 145
Score = 287 bits (145), Expect = 1e-78
Identities = 145/145 (100%)
Strand = Plus / Plus
Query: 1 tgaagctatttgcttctgagtggaatgttgtctggttcaaggtctcatgcaccttgcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagctatttgcttctgagtggaatgttgtctggttcaaggtctcatgcaccttgcggt 60
Query: 61 tttgaggatgatttgtgcaaggtttttcattcctctcatccgtgggatctcggaccaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttgaggatgatttgtgcaaggtttttcattcctctcatccgtgggatctcggaccaggc 120
Query: 121 ttcattcccctcagagatagcttca 145
|||||||||||||||||||||||||
Sbjct: 121 ttcattcccctcagagatagcttca 145
>48848_osa-miR166e:pmrd
Length = 137
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 103 tgggatctcggaccaggcttcattcccctcagagata 139
|||| ||||| ||||||||||||||||||||||||||
Sbjct: 101 tgggttctcgaaccaggcttcattcccctcagagata 137
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 ttctgagtggaatgttgtctggttcaagg 42
||||| |||||||||||||||||||||||
Sbjct: 4 ttctgggtggaatgttgtctggttcaagg 32
>54972_zma-miR166p:pmrd
Length = 95
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 106 gatctcggaccaggcttcattcccctca 133
||||||||||||||||||||||||||||
Sbjct: 67 gatctcggaccaggcttcattcccctca 94
>48847_osa-miR166d:pmrd
Length = 125
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 106 gatctcggaccaggcttcattcccctca 133
||||||||||||||||||||||||||||
Sbjct: 87 gatctcggaccaggcttcattcccctca 114
>54973_zma-miR166q:pmrd
Length = 91
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 106 gatctcggaccaggcttcattcccctc 132
|||||||||||||||||||||||||||
Sbjct: 65 gatctcggaccaggcttcattcccctc 91
>54970_zma-miR166n:pmrd
Length = 96
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 106 gatctcggaccaggcttcattcccctc 132
|||||||||||||||||||||||||||
Sbjct: 70 gatctcggaccaggcttcattcccctc 96
>54577_smo-miR166b:pmrd
Length = 136
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 108 tctcggaccaggcttcattcccctcag 134
|||||||||||||||||||||||||||
Sbjct: 97 tctcggaccaggcttcattcccctcag 123
>54425_sbi-miR166j:pmrd
Length = 108
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 103 tgggatctcggaccaggcttcattcccctca 133
||||| |||||||||||||||||||||||||
Sbjct: 78 tgggacctcggaccaggcttcattcccctca 108
>54416_sbi-miR166a:pmrd
Length = 108
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 20 gtggaatgttgtctggttcaaggtctc 46
|||||||||||||||||||||||||||
Sbjct: 1 gtggaatgttgtctggttcaaggtctc 27
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 106 gatctcggaccaggcttcattcccc 130
|||||||||||||||||||||||||
Sbjct: 84 gatctcggaccaggcttcattcccc 108
>54960_zma-miR166d:pmrd
Length = 104
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 gtggaatgttgtctggttcaaggtct 45
||||||||||||||||||||||||||
Sbjct: 1 gtggaatgttgtctggttcaaggtct 26
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 106 gatctcggaccaggcttcattcccc 130
|||||||||||||||||||||||||
Sbjct: 80 gatctcggaccaggcttcattcccc 104
>54958_zma-miR166b:pmrd
Length = 116
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 gtggaatgttgtctggttcaaggtct 45
||||||||||||||||||||||||||
Sbjct: 1 gtggaatgttgtctggttcaaggtct 26
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 106 gatctcggaccaggcttcattcccc 130
|||||||||||||||||||||||||
Sbjct: 92 gatctcggaccaggcttcattcccc 116
>54576_smo-miR166a:pmrd
Length = 145
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 108 tctcggaccaggcttcattcccctca 133
||||||||||||||||||||||||||
Sbjct: 106 tctcggaccaggcttcattcccctca 131
>51637_ptc-miR166m:pmrd
Length = 105
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 108 tctcggaccaggcttcattcccctca 133
||||||||||||||||||||||||||
Sbjct: 74 tctcggaccaggcttcattcccctca 99
>51373_ppt-miR166f:pmrd
Length = 123
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 109 ctcggaccaggcttcattcccctcag 134
||||||||||||||||||||||||||
Sbjct: 73 ctcggaccaggcttcattcccctcag 98
>48849_osa-miR166f:pmrd
Length = 107
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 108 tctcggaccaggcttcattcccctca 133
||||||||||||||||||||||||||
Sbjct: 70 tctcggaccaggcttcattcccctca 95
>46951_ath-miR166g:pmrd
Length = 122
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 108 tctcggaccaggcttcattcccctca 133
||||||||||||||||||||||||||
Sbjct: 83 tctcggaccaggcttcattcccctca 108
>54961_zma-miR166e:pmrd
Length = 87
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 106 gatctcggaccaggcttcattcccc 130
|||||||||||||||||||||||||
Sbjct: 63 gatctcggaccaggcttcattcccc 87
>54959_zma-miR166c:pmrd
Length = 92
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 106 gatctcggaccaggcttcattcccc 130
|||||||||||||||||||||||||
Sbjct: 68 gatctcggaccaggcttcattcccc 92
>54957_zma-miR166a:pmrd
Length = 213
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 106 gatctcggaccaggcttcattcccc 130
|||||||||||||||||||||||||
Sbjct: 185 gatctcggaccaggcttcattcccc 209
>54796_vvi-miR166h:pmrd
Length = 100
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 106 gatctcggaccaggcttcattcccc 130
|||||||||||||||||||||||||
Sbjct: 65 gatctcggaccaggcttcattcccc 89
>54792_vvi-miR166d:pmrd
Length = 160
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 109 ctcggaccaggcttcattcccctca 133
|||||||||||||||||||||||||
Sbjct: 128 ctcggaccaggcttcattcccctca 152
>54578_smo-miR166c:pmrd
Length = 138
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 110 tcggaccaggcttcattcccctcag 134
|||||||||||||||||||||||||
Sbjct: 107 tcggaccaggcttcattcccctcag 131
>54423_sbi-miR166h:pmrd
Length = 185
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 106 gatctcggaccaggcttcattcccc 130
|||||||||||||||||||||||||
Sbjct: 158 gatctcggaccaggcttcattcccc 182
>54419_sbi-miR166d:pmrd
Length = 87
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 106 gatctcggaccaggcttcattcccc 130
|||||||||||||||||||||||||
Sbjct: 63 gatctcggaccaggcttcattcccc 87
>51636_ptc-miR166l:pmrd
Length = 97
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 109 ctcggaccaggcttcattcccctca 133
|||||||||||||||||||||||||
Sbjct: 67 ctcggaccaggcttcattcccctca 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 gaatgttgtctggttcaagg 42
||||||||||||||||||||
Sbjct: 14 gaatgttgtctggttcaagg 33
>51633_ptc-miR166i:pmrd
Length = 103
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 109 ctcggaccaggcttcattcccctca 133
|||||||||||||||||||||||||
Sbjct: 73 ctcggaccaggcttcattcccctca 97
>51632_ptc-miR166h:pmrd
Length = 101
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 106 gatctcggaccaggcttcattcccc 130
|||||||||||||||||||||||||
Sbjct: 68 gatctcggaccaggcttcattcccc 92
>51631_ptc-miR166g:pmrd
Length = 103
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 106 gatctcggaccaggcttcattcccc 130
|||||||||||||||||||||||||
Sbjct: 70 gatctcggaccaggcttcattcccc 94
>51374_ppt-miR166g:pmrd
Length = 146
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 110 tcggaccaggcttcattcccctcag 134
|||||||||||||||||||||||||
Sbjct: 96 tcggaccaggcttcattcccctcag 120
>51372_ppt-miR166e:pmrd
Length = 146
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 110 tcggaccaggcttcattcccctcag 134
|||||||||||||||||||||||||
Sbjct: 96 tcggaccaggcttcattcccctcag 120
>51369_ppt-miR166b:pmrd
Length = 103
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 110 tcggaccaggcttcattcccctcag 134
|||||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccctcag 98
>51368_ppt-miR166a:pmrd
Length = 102
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 110 tcggaccaggcttcattcccctcag 134
|||||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccctcag 98
>48845_osa-miR166b:pmrd
Length = 206
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 106 gatctcggaccaggcttcattcccc 130
|||||||||||||||||||||||||
Sbjct: 164 gatctcggaccaggcttcattcccc 188
>48711_mtr-miR165:pmrd
Length = 82
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 106 gatctcggaccaggcttcattcccc 130
|||||||||||||||||||||||||
Sbjct: 58 gatctcggaccaggcttcattcccc 82
>48550_gma-miR166n:pmrd
Length = 409
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 110 tcggaccaggcttcattcccctcag 134
|||||||||||||||||||||||||
Sbjct: 1 tcggaccaggcttcattcccctcag 25
>54795_vvi-miR166g:pmrd
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 110 tcggaccaggcttcattcccctca 133
||||||||||||||||||||||||
Sbjct: 69 tcggaccaggcttcattcccctca 92
>54794_vvi-miR166f:pmrd
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 110 tcggaccaggcttcattcccctca 133
||||||||||||||||||||||||
Sbjct: 69 tcggaccaggcttcattcccctca 92
>54543_sly-miR166a:pmrd
Length = 111
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 110 tcggaccaggcttcattcccctca 133
||||||||||||||||||||||||
Sbjct: 86 tcggaccaggcttcattcccctca 109
>51630_ptc-miR166f:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 110 tcggaccaggcttcattcccctca 133
||||||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattcccctca 99
>51628_ptc-miR166d:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 110 tcggaccaggcttcattcccctca 133
||||||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattcccctca 99
>51559_pta-miR166b:pmrd
Length = 125
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 110 tcggaccaggcttcattcccctca 133
||||||||||||||||||||||||
Sbjct: 90 tcggaccaggcttcattcccctca 113
>48850_osa-miR166g:pmrd
Length = 145
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 105 ggatctcggaccaggcttcattcc 128
||||||||||||||||||||||||
Sbjct: 110 ggatctcggaccaggcttcattcc 133
>48344_bna-miR166c:pmrd
Length = 128
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 110 tcggaccaggcttcattcccctca 133
||||||||||||||||||||||||
Sbjct: 93 tcggaccaggcttcattcccctca 116
>48343_bna-miR166b:pmrd
Length = 118
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 110 tcggaccaggcttcattcccctca 133
||||||||||||||||||||||||
Sbjct: 91 tcggaccaggcttcattcccctca 114
>46950_ath-miR166f:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 110 tcggaccaggcttcattcccctca 133
||||||||||||||||||||||||
Sbjct: 78 tcggaccaggcttcattcccctca 101
>46949_ath-miR166e:pmrd
Length = 143
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 110 tcggaccaggcttcattcccctca 133
||||||||||||||||||||||||
Sbjct: 119 tcggaccaggcttcattcccctca 142
>46870_aqc-miR166e:pmrd
Length = 147
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 110 tcggaccaggcttcattcccctca 133
||||||||||||||||||||||||
Sbjct: 121 tcggaccaggcttcattcccctca 144
>46868_aqc-miR166c:pmrd
Length = 116
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 105 ggatctcggaccaggcttcattcc 128
||||||||||||||||||||||||
Sbjct: 84 ggatctcggaccaggcttcattcc 107
>54974_zma-miR166r:pmrd
Length = 83
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 108 tctcggaccaggcttcattcccc 130
|||||||||||||||||||||||
Sbjct: 61 tctcggaccaggcttcattcccc 83
>54971_zma-miR166o:pmrd
Length = 95
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 108 tctcggaccaggcttcattcccc 130
|||||||||||||||||||||||
Sbjct: 67 tctcggaccaggcttcattcccc 89
>54968_zma-miR166l:pmrd
Length = 137
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 106 gatctcggaccaggcttcattcc 128
|||||||||||||||||||||||
Sbjct: 94 gatctcggaccaggcttcattcc 116
>54965_zma-miR166i:pmrd
Length = 83
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 108 tctcggaccaggcttcattcccc 130
|||||||||||||||||||||||
Sbjct: 61 tctcggaccaggcttcattcccc 83
>54789_vvi-miR166a:pmrd
Length = 130
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 106 gatctcggaccaggcttcattcc 128
|||||||||||||||||||||||
Sbjct: 96 gatctcggaccaggcttcattcc 118
>54424_sbi-miR166i:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 108 tctcggaccaggcttcattcccc 130
|||||||||||||||||||||||
Sbjct: 64 tctcggaccaggcttcattcccc 86
>54379_pvu-miR166:pmrd
Length = 144
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 108 tctcggaccaggcttcattcccc 130
|||||||||||||||||||||||
Sbjct: 112 tctcggaccaggcttcattcccc 134
>51639_ptc-miR166o:pmrd
Length = 324
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 106 gatctcggaccaggcttcattcc 128
|||||||||||||||||||||||
Sbjct: 292 gatctcggaccaggcttcattcc 314
>51638_ptc-miR166n:pmrd
Length = 331
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 106 gatctcggaccaggcttcattcc 128
|||||||||||||||||||||||
Sbjct: 299 gatctcggaccaggcttcattcc 321
>51371_ppt-miR166d:pmrd
Length = 128
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 110 tcggaccaggcttcattcccctc 132
|||||||||||||||||||||||
Sbjct: 82 tcggaccaggcttcattcccctc 104
>51370_ppt-miR166c:pmrd
Length = 123
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 110 tcggaccaggcttcattcccctc 132
|||||||||||||||||||||||
Sbjct: 77 tcggaccaggcttcattcccctc 99
>48714_mtr-miR166d:pmrd
Length = 97
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 108 tctcggaccaggcttcattcccc 130
|||||||||||||||||||||||
Sbjct: 75 tctcggaccaggcttcattcccc 97
>48713_mtr-miR166c:pmrd
Length = 171
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 106 gatctcggaccaggcttcattcc 128
|||||||||||||||||||||||
Sbjct: 147 gatctcggaccaggcttcattcc 169
>48549_gma-miR166b:pmrd
Length = 167
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 108 tctcggaccaggcttcattcccc 130
|||||||||||||||||||||||
Sbjct: 126 tctcggaccaggcttcattcccc 148
>48345_bna-miR166d:pmrd
Length = 128
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 108 tctcggaccaggcttcattcccc 130
|||||||||||||||||||||||
Sbjct: 75 tctcggaccaggcttcattcccc 97
>46948_ath-miR166d:pmrd
Length = 113
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 108 tctcggaccaggcttcattcccc 130
|||||||||||||||||||||||
Sbjct: 85 tctcggaccaggcttcattcccc 107
>46947_ath-miR166c:pmrd
Length = 139
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 108 tctcggaccaggcttcattcccc 130
|||||||||||||||||||||||
Sbjct: 101 tctcggaccaggcttcattcccc 123
