miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>49044_osa-miR810a:pmrd
Length = 237
Score = 470 bits (237), Expect = e-133
Identities = 237/237 (100%)
Strand = Plus / Plus
Query: 1 aatattcactatggttgccatcataagcccaccacatgtggctcgcatgcttaaataact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatattcactatggttgccatcataagcccaccacatgtggctcgcatgcttaaataact 60
Query: 61 aacggcataattagatcacttgatgacgacgtatatcggtgttcgctatatatactatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aacggcataattagatcacttgatgacgacgtatatcggtgttcgctatatatactatct 120
Query: 121 actggtaagtatatatagcgaacaccgatatgcgtcatcatcaagtgatttaattatgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 actggtaagtatatatagcgaacaccgatatgcgtcatcatcaagtgatttaattatgcc 180
Query: 181 gttagttaagcatgcgagccacatgtggtgagcttacgatgacgaccacagtttgtt 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttagttaagcatgcgagccacatgtggtgagcttacgatgacgaccacagtttgtt 237
Score = 208 bits (105), Expect = 1e-54
Identities = 182/207 (87%), Gaps = 8/207 (3%)
Strand = Plus / Minus
Query: 19 catcataagcccaccacatgtggctcgcatgcttaaataactaacggcataattagatca 78
|||| ||||| ||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 221 catcgtaagctcaccacatgtggctcgcatgcttaa----ctaacggcataattaaatca 166
Query: 79 cttgatgacgacgtatatcggtgttcgctatatatactatctactggtaagtatatatag 138
|||||||| |||| |||||||||||||||||||||||| | | | | |||||||||||
Sbjct: 165 cttgatgatgacgcatatcggtgttcgctatatatacttaccagtagatagtatatatag 106
Query: 139 cgaacaccgatatgcgtcatcatcaagtgatttaattatgccgttag----ttaagcatg 194
||||||||||||| |||| |||||||||||| ||||||||||||||| |||||||||
Sbjct: 105 cgaacaccgatatacgtcgtcatcaagtgatctaattatgccgttagttatttaagcatg 46
Query: 195 cgagccacatgtggtgagcttacgatg 221
|||||||||||||||| ||||| ||||
Sbjct: 45 cgagccacatgtggtgggcttatgatg 19
