miRNEST 2.0, an integrative microRNA resource :: BLAST
>55121_zma-miR2118e:pmrd
Length = 143
Score = 60.0 bits (30), Expect = 6e-10
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 106 ttttcctgatgcctcccattcctacagttcttaggtccttgttcctcttacttt 159
||||||||||| ||||||||||||| |||||||||| || |||||||| ||||
Sbjct: 88 ttttcctgatgtctcccattcctacggttcttaggtgctccttcctcttccttt 141
Score = 56.0 bits (28), Expect = 9e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 26 tctaagagcagtaggaatgggaacatgaaggaaagc 61
|||||||||||| ||||||| |||||||||||||||
Sbjct: 26 tctaagagcagtgggaatggaaacatgaaggaaagc 61
>55123_zma-miR2118g:pmrd
Length = 145
Score = 58.0 bits (29), Expect = 2e-09
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 6 gccaggaagaggat-agagactctaagagcagtaggaatgggaacatgaaggaaagc 61
|||||||| ||||| | ||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 1 gccaggaaaaggatgaaagattctaagagcactaggaataggaacatgaaggaaagc 57
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 106 ttttcctgatgcctcccattccta 129
|||||||||||||||| |||||||
Sbjct: 88 ttttcctgatgcctcctattccta 111
>55118_zma-miR2118b:pmrd
Length = 118
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 28 taagagcagtaggaatgggaacatgaaggaaagcc 62
|||||||||| |||||||||||||| |||||||||
Sbjct: 1 taagagcagtgggaatgggaacatggaggaaagcc 35
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 107 tttcctgatgcctcccattcctacagttctta 138
||||| ||||||||||||||||| |||||||
Sbjct: 87 tttcccgatgcctcccattcctattgttctta 118
>49164_osa-miR1869:pmrd
Length = 138
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 27 ctaagagcagtaggaatgggaacatgaaggaaagcc 62
||||||||| |||| ||||||||||| |||||||||
Sbjct: 127 ctaagagcattaggcatgggaacatggaggaaagcc 92
>55119_zma-miR2118c:pmrd
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 108 ttcctgatgcctcccattcctacagttcttaggt 141
||||| |||||||||||||||| ||||||||||
Sbjct: 85 ttcctaatgcctcccattcctatcgttcttaggt 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 26 tctaagagcagtaggaatgggaacatgaaggaa 58
|||||||||||| || ||||||||||| |||||
Sbjct: 21 tctaagagcagtgggcatgggaacatggaggaa 53
>55120_zma-miR2118d:pmrd
Length = 148
Score = 42.1 bits (21), Expect = 1e-04
Identities = 48/57 (84%)
Strand = Plus / Plus
Query: 108 ttcctgatgcctcccattcctacagttcttaggtccttgttcctcttactttcggct 164
||||||||||||||||| |||| ||| |||||| || |||||||| |||| ||||
Sbjct: 89 ttcctgatgcctcccatgcctatcgttgttaggtgctccttcctcttgcttttggct 145
>55117_zma-miR2118a:pmrd
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 108 ttcctgatgcctcccattcctacagttcttagg 140
||||||||||||| |||||||| |||||||||
Sbjct: 86 ttcctgatgcctctcattcctatggttcttagg 118
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 27 ctaagagcagtaggaatgggaacatgaaggaa 58
||||| |||||||| ||| |||||||||||||
Sbjct: 2 ctaagggcagtagggatgagaacatgaaggaa 33
