miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>55121_zma-miR2118e:pmrd
          Length = 143

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 115 gttttcccgatgcctcctattcctaccgatcttaggtactccttcctcttccttt 169
           ||||||| |||| |||| |||||||| | |||||||| |||||||||||||||||
Sbjct: 87  gttttcctgatgtctcccattcctacggttcttaggtgctccttcctcttccttt 141



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                      
Query: 9  ggaagaggaagaaagagagcctctaagagcgatgggaataggaacatggaggaaagcctg 68
          ||||| ||||||||||||   |||||||||  ||||||| | |||||| |||||||| ||
Sbjct: 5  ggaagtggaagaaagagaatgtctaagagcagtgggaatggaaacatgaaggaaagcatg 64

            
Query: 69 aa 70
          ||
Sbjct: 65 aa 66




>55123_zma-miR2118g:pmrd
          Length = 145

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 115 gttttcccgatgcctcctattcctaccgatcttaggtactccttcc 160
           ||||||| |||||||||||||||||  | |||||||| ||||||||
Sbjct: 87  gttttcctgatgcctcctattcctaaggctcttaggttctccttcc 132



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                              
Query: 30 tctaagagcgatgggaataggaacatggaggaaagc 65
          |||||||||  | |||||||||||||| ||||||||
Sbjct: 22 tctaagagcactaggaataggaacatgaaggaaagc 57




>55118_zma-miR2118b:pmrd
          Length = 118

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                             
Query: 32 taagagcgatgggaataggaacatggaggaaagcc 66
          |||||||  ||||||| ||||||||||||||||||
Sbjct: 1  taagagcagtgggaatgggaacatggaggaaagcc 35




>55119_zma-miR2118c:pmrd
          Length = 133

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 124 atgcctcctattcctaccgatcttaggtactccttcctctt 164
           |||||||| ||||||| || ||||||||  |||||||||||
Sbjct: 91  atgcctcccattcctatcgttcttaggtgatccttcctctt 131




>55120_zma-miR2118d:pmrd
          Length = 148

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 118 ttcccgatgcctcctattcctaccgatcttaggtactccttcctcttccttt 169
           |||| ||||||||| || |||| || | |||||| |||||||||||| ||||
Sbjct: 89  ttcctgatgcctcccatgcctatcgttgttaggtgctccttcctcttgcttt 140