miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>55119_zma-miR2118c:pmrd
          Length = 133

 Score = 83.8 bits (42), Expect = 4e-17
 Identities = 51/54 (94%)
 Strand = Plus / Plus

                                                                
Query: 9  ggaagaggaagaaaagagggtctaagagcagtgggcatgggaacatggaggaag 62
          ||||||||||| ||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 1  ggaagaggaagtaaagatgatctaagagcagtgggcatgggaacatggaggaag 54




>55120_zma-miR2118d:pmrd
          Length = 148

 Score = 71.9 bits (36), Expect = 2e-13
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                  
Query: 23 agagggtctaagagcagtgggcatgggaacatggaggaag 62
          ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 20 agagggtctaagagcagtgggcatgggaacacggaggaag 59



 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 122 atgcctcccatgcctacagttcttaggtactccttccccttcctgttggct 172
           ||||||||||||||||  ||| |||||| |||||||| ||| || ||||||
Sbjct: 95  atgcctcccatgcctatcgttgttaggtgctccttcctcttgcttttggct 145




>55118_zma-miR2118b:pmrd
          Length = 118

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 31 taagagcagtgggcatgggaacatggaggaa 61
          ||||||||||||| |||||||||||||||||
Sbjct: 1  taagagcagtgggaatgggaacatggaggaa 31




>55122_zma-miR2118f:pmrd
          Length = 120

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 31 taagagcagtgggcatgggaacat 54
          ||||||||||||||||||||||||
Sbjct: 1  taagagcagtgggcatgggaacat 24



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 115 tttcccaatgcctcccatgcctacagttctta 146
           ||||||||||||| |||||||||  |||||||
Sbjct: 89  tttcccaatgccttccatgcctattgttctta 120




>49164_osa-miR1869:pmrd
          Length = 138

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 30  ctaagagcagtgggcatgggaacatggaggaa 61
           ||||||||| | ||||||||||||||||||||
Sbjct: 127 ctaagagcattaggcatgggaacatggaggaa 96



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 114 ttttcccaatgcctcccatgccta 137
           |||||||||| |||||||||||||
Sbjct: 43  ttttcccaatacctcccatgccta 20




>55121_zma-miR2118e:pmrd
          Length = 143

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                            
Query: 28 gtctaagagcagtgggcatgggaacatggaggaa 61
          |||||||||||||||| |||| |||||| |||||
Sbjct: 25 gtctaagagcagtgggaatggaaacatgaaggaa 58