miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54412_sbi-miR164c:pmrd
Length = 153
Score = 303 bits (153), Expect = 2e-83
Identities = 153/153 (100%)
Strand = Plus / Plus
Query: 1 tatggtgtgtttgtgcagggtggagaagcaggacacgtgagcgaccatccagtttccatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatggtgtgtttgtgcagggtggagaagcaggacacgtgagcgaccatccagtttccatc 60
Query: 61 gctggctctccgctgcgggcgctgccgtgcgttggatcgtcgttgggtggtcgctcatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctggctctccgctgcgggcgctgccgtgcgttggatcgtcgttgggtggtcgctcatgt 120
Query: 121 gtccgtcctctccaccgagcaccggtacatccg 153
|||||||||||||||||||||||||||||||||
Sbjct: 121 gtccgtcctctccaccgagcaccggtacatccg 153
>48842_osa-miR164e:pmrd
Length = 132
Score = 69.9 bits (35), Expect = 5e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 11 ttgtgcagggtggagaagcaggacacgtgagcgaccatccagt 53
|||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 1 ttgtgcagggtggagaagcagggcacgtgagcggccatccagt 43
Score = 56.0 bits (28), Expect = 8e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 103 ttgggtggtcgctcatgtgtccgtcctctccaccgagcac 142
|||| |||||| ||||||||||||| ||||||||||||||
Sbjct: 91 ttggatggtcgttcatgtgtccgtcttctccaccgagcac 130
>48839_osa-miR164b:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 115 tcatgtgtccgtcctctccaccgagcac 142
||||||| ||||| ||||||||||||||
Sbjct: 82 tcatgtgcccgtcttctccaccgagcac 109
