miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54445_sbi-miR169i:pmrd
Length = 169
Score = 335 bits (169), Expect = 6e-93
Identities = 169/169 (100%)
Strand = Plus / Plus
Query: 1 gatggagagcccccttttgctagccaagaatgacttgcctatgcatgccctctgttggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatggagagcccccttttgctagccaagaatgacttgcctatgcatgccctctgttggca 60
Query: 61 attcctccagccatggagattgcacaaggtgaatttttgcggcatagatgatggatgcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attcctccagccatggagattgcacaaggtgaatttttgcggcatagatgatggatgcaa 120
Query: 121 tgtggctgcatgggcaggtcttcttggctagccagagtgctctcatcca 169
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtggctgcatgggcaggtcttcttggctagccagagtgctctcatcca 169
>48889_osa-miR169n:pmrd
Length = 177
Score = 79.8 bits (40), Expect = 6e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 116 tgcaatgtggctgcatgggcaggtcttcttggctagccagagtg 159
|||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 132 tgcaatgtggctgcatgggccggtcttcttggctagccagagtg 175
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 tttgctagccaagaatgacttgcctatg 43
|||| |||||||||||||||||||||||
Sbjct: 6 tttggtagccaagaatgacttgcctatg 33
>48890_osa-miR169o:pmrd
Length = 173
Score = 71.9 bits (36), Expect = 1e-13
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 116 tgcaatgtggctgcatgggcaggtcttcttggctagccagagtg 159
||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 128 tgcaatgaggctgcatgggccggtcttcttggctagccagagtg 171
Score = 46.1 bits (23), Expect = 8e-06
Identities = 41/46 (89%), Gaps = 2/46 (4%)
Strand = Plus / Plus
Query: 16 tttgctagccaagaatgacttgcctatgc--atgccctctgttggc 59
|||| ||||||||||||||||||||| || ||||||||||||||
Sbjct: 6 tttggtagccaagaatgacttgcctacgcttttgccctctgttggc 51
