miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54449_sbi-miR169m:pmrd
Length = 92
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctatatcctctctaaaggatcagcaaatattgaggcttctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagccaaggatgacttgcctatatcctctctaaaggatcagcaaatattgaggcttctag 60
Query: 61 tggtctcatatgggcagtctccttggctagcc 92
||||||||||||||||||||||||||||||||
Sbjct: 61 tggtctcatatgggcagtctccttggctagcc 92
>54450_sbi-miR169n:pmrd
Length = 93
Score = 121 bits (61), Expect = 9e-29
Identities = 85/92 (92%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctatatcctctctaaaggatcagcaaatattgaggcttctag 60
||||||||||||||||||||||||||||| | |||||||||||||||| ||||||| ||
Sbjct: 3 tagccaaggatgacttgcctatatcctctatgaaggatcagcaaatatcgaggctttgag 62
Query: 61 tggtctcatatgggcagtctccttggctagcc 92
||||||| |||||||||||||||||||||||
Sbjct: 63 tggtctc--atgggcagtctccttggctagcc 92
>46874_aqc-miR169b:pmrd
Length = 180
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctatatcctct 29
|||||||||||||||||||| ||||||||
Sbjct: 1 tagccaaggatgacttgcctgtatcctct 29
>51675_ptc-miR169r:pmrd
Length = 119
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctatatcctc 28
|||||||||||||||||||||| |||||
Sbjct: 11 tagccaaggatgacttgcctatttcctc 38
>48892_osa-miR169q:pmrd
Length = 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1 tagccaaggatgacttgcctatatcctctctaaaggatcagcaa 44
|||||||||||||||||||| | ||||| || |||||| |||||
Sbjct: 98 tagccaaggatgacttgcctgtgtcctccctgaaggattagcaa 55
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 70 atgggcagtctccttggctagcc 92
|||||||||||||||||||||||
Sbjct: 30 atgggcagtctccttggctagcc 8
>48887_osa-miR169l:pmrd
Length = 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctatatcctctctaaaggatcagcaa 44
|||||||||||||||||||| | ||||| || |||||| |||||
Sbjct: 11 tagccaaggatgacttgcctgtgtcctccctgaaggattagcaa 54
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 atgggcagtctccttggctagcc 92
|||||||||||||||||||||||
Sbjct: 79 atgggcagtctccttggctagcc 101
>55015_zma-miR169m:pmrd
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctatatcct 27
|||||||||||||||||||||| ||||
Sbjct: 1 tagccaaggatgacttgcctatgtcct 27
>55014_zma-miR169l:pmrd
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctatatcct 27
|||||||||||||||||||||| ||||
Sbjct: 1 tagccaaggatgacttgcctatgtcct 27
>55010_zma-miR169h:pmrd
Length = 128
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctatatcct 27
|||||||||||||||||||||| ||||
Sbjct: 21 tagccaaggatgacttgcctatgtcct 47
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 ggcagtctccttggctagcc 92
||||||||||||||||||||
Sbjct: 93 ggcagtctccttggctagcc 112
>55007_zma-miR169e:pmrd
Length = 128
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1 tagccaaggatgacttgcctatatcct 27
|||||||||||||||||||||| ||||
Sbjct: 109 tagccaaggatgacttgcctatgtcct 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 73 ggcagtctccttggctagcc 92
||||||||||||||||||||
Sbjct: 37 ggcagtctccttggctagcc 18
>55006_zma-miR169d:pmrd
Length = 128
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1 tagccaaggatgacttgcctatatcct 27
|||||||||||||||||||||| ||||
Sbjct: 109 tagccaaggatgacttgcctatgtcct 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 73 ggcagtctccttggctagcc 92
||||||||||||||||||||
Sbjct: 37 ggcagtctccttggctagcc 18
>48883_osa-miR169h:pmrd
Length = 122
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 atgggcagtctccttggctagcc 92
|||||||||||||||||||||||
Sbjct: 92 atgggcagtctccttggctagcc 114
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30
>54826_vvi-miR169x:pmrd
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctatatcc 26
||||||||||||||||||||| ||||
Sbjct: 12 tagccaaggatgacttgcctaaatcc 37
>48882_osa-miR169g:pmrd
Length = 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctat 22
||||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcctat 32
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 ggcagtctccttggctagcc 92
||||||||||||||||||||
Sbjct: 99 ggcagtctccttggctagcc 118
>48354_bna-miR169e:pmrd
Length = 276
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctat 22
||||||||||||||||||||||
Sbjct: 251 tagccaaggatgacttgcctat 272
>48352_bna-miR169c:pmrd
Length = 176
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctat 22
||||||||||||||||||||||
Sbjct: 26 tagccaaggatgacttgcctat 47
>55011_zma-miR169i:pmrd
Length = 191
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 72 gggcagtctccttggctagcc 92
|||||||||||||||||||||
Sbjct: 154 gggcagtctccttggctagcc 174
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40
>55009_zma-miR169g:pmrd
Length = 140
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgccta 21
|||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgccta 41
>55008_zma-miR169f:pmrd
Length = 150
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgccta 21
|||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgccta 41
>54550_sly-miR169d:pmrd
Length = 176
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgccta 21
|||||||||||||||||||||
Sbjct: 39 tagccaaggatgacttgccta 59
>54440_sbi-miR169d:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgccta 21
|||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgccta 41
>54439_sbi-miR169c:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgccta 21
|||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgccta 41
>48881_osa-miR169f:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgccta 21
|||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgccta 31
>48355_bna-miR169f:pmrd
Length = 201
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgccta 21
|||||||||||||||||||||
Sbjct: 31 tagccaaggatgacttgccta 51
>48353_bna-miR169d:pmrd
Length = 220
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgccta 21
|||||||||||||||||||||
Sbjct: 40 tagccaaggatgacttgccta 60
>46873_aqc-miR169a:pmrd
Length = 158
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgccta 21
|||||||||||||||||||||
Sbjct: 26 tagccaaggatgacttgccta 46
>55013_zma-miR169k:pmrd
Length = 133
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 ggcagtctccttggctagcc 92
||||||||||||||||||||
Sbjct: 97 ggcagtctccttggctagcc 116
>55012_zma-miR169j:pmrd
Length = 151
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40
>54807_vvi-miR169e:pmrd
Length = 149
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 12 tagccaaggatgacttgcct 31
>54548_sly-miR169b:pmrd
Length = 205
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 171 tagccaaggatgacttgcct 190
>54448_sbi-miR169l:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 94 tagccaaggatgacttgcct 75
>54444_sbi-miR169h:pmrd
Length = 155
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40
>54443_sbi-miR169g:pmrd
Length = 152
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40
>54442_sbi-miR169f:pmrd
Length = 148
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 ggcagtctccttggctagcc 92
||||||||||||||||||||
Sbjct: 112 ggcagtctccttggctagcc 131
>54441_sbi-miR169e:pmrd
Length = 240
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40
>52726_ptc-miRf10904-akr:pmrd
Length = 132
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 15 tagccaaggatgacttgcct 34
>51678_ptc-miR169u:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctatatcctc 28
|||||||||| ||||||||||| |||||
Sbjct: 11 tagccaaggacgacttgcctatttcctc 38
>51670_ptc-miR169m:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30
>51669_ptc-miR169l:pmrd
Length = 143
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30
>51668_ptc-miR169k:pmrd
Length = 203
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30
>51667_ptc-miR169j:pmrd
Length = 137
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 ggcagtctccttggctagcc 92
||||||||||||||||||||
Sbjct: 113 ggcagtctccttggctagcc 132
>51666_ptc-miR169i:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30
>48888_osa-miR169m:pmrd
Length = 138
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 ggcagtctccttggctagcc 92
||||||||||||||||||||
Sbjct: 111 ggcagtctccttggctagcc 130
>48886_osa-miR169k:pmrd
Length = 156
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30
>48885_osa-miR169j:pmrd
Length = 125
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 ggcagtctccttggctagcc 92
||||||||||||||||||||
Sbjct: 98 ggcagtctccttggctagcc 117
>48884_osa-miR169i:pmrd
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30
>48487_ghb-miR169a:pmrd
Length = 189
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 50 tagccaaggatgacttgcct 69
>48361_bna-miR169l:pmrd
Length = 199
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 25 tagccaaggatgacttgcct 44
>48360_bna-miR169k:pmrd
Length = 155
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 34 tagccaaggatgacttgcct 53
>48359_bna-miR169j:pmrd
Length = 167
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 9 tagccaaggatgacttgcct 28
>48358_bna-miR169i:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 15 tagccaaggatgacttgcct 34
>48357_bna-miR169h:pmrd
Length = 176
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 37 tagccaaggatgacttgcct 56
>48356_bna-miR169g:pmrd
Length = 168
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 37 tagccaaggatgacttgcct 56
>47103_ath-miRf10003-akr:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 121 tagccaaggatgacttgcct 102
>46974_ath-miR169n:pmrd
Length = 215
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 45 tagccaaggatgacttgcct 64
>46973_ath-miR169m:pmrd
Length = 212
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 42 tagccaaggatgacttgcct 61
>46972_ath-miR169l:pmrd
Length = 211
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 44 tagccaaggatgacttgcct 63
>46971_ath-miR169k:pmrd
Length = 213
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 43 tagccaaggatgacttgcct 62
>46970_ath-miR169j:pmrd
Length = 221
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 51 tagccaaggatgacttgcct 70
>46969_ath-miR169i:pmrd
Length = 206
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 40 tagccaaggatgacttgcct 59
>46968_ath-miR169h:pmrd
Length = 190
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 46 tagccaaggatgacttgcct 65
