miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>55087_zma-miR397b:pmrd
          Length = 80

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 1  tcattgagtgcagcgttgatgagccagc 28
          |||||||| |||||||||||||||||||
Sbjct: 1  tcattgagcgcagcgttgatgagccagc 28



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 67 cggctcaccggcgctgcactcaatt 91
          ||||||||| |||||||||||||||
Sbjct: 55 cggctcaccagcgctgcactcaatt 79




>54873_vvi-miR397b:pmrd
          Length = 118

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tcattgagtgcagcgttgatga 22
          ||||||||||||||||||||||
Sbjct: 11 tcattgagtgcagcgttgatga 32




>54872_vvi-miR397a:pmrd
          Length = 118

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tcattgagtgcagcgttgatga 22
          ||||||||||||||||||||||
Sbjct: 11 tcattgagtgcagcgttgatga 32




>51741_ptc-miR397a:pmrd
          Length = 120

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tcattgagtgcagcgttgatga 22
          ||||||||||||||||||||||
Sbjct: 11 tcattgagtgcagcgttgatga 32




>48961_osa-miR397b:pmrd
          Length = 118

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                            
Query: 3  attgagtgcagcgttgatgagccagctggccggc 36
          |||||||||||||||||||| || || |||||||
Sbjct: 13 attgagtgcagcgttgatgaacctgccggccggc 46




>48960_osa-miR397b:pmrd
          Length = 118

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                            
Query: 3  attgagtgcagcgttgatgagccagctggccggc 36
          |||||||||||||||||||| || || |||||||
Sbjct: 13 attgagtgcagcgttgatgaacctgccggccggc 46




>48959_osa-miR397a:pmrd
          Length = 114

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tcattgagtgcagcgttgatga 22
          ||||||||||||||||||||||
Sbjct: 11 tcattgagtgcagcgttgatga 32




>48958_osa-miR397a:pmrd
          Length = 114

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tcattgagtgcagcgttgatga 22
          ||||||||||||||||||||||
Sbjct: 11 tcattgagtgcagcgttgatga 32




>48334_bdi-miR2508:pmrd
          Length = 99

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tcattgagtgcagcgttgatga 22
          ||||||||||||||||||||||
Sbjct: 10 tcattgagtgcagcgttgatga 31




>48315_bdi-miR397:pmrd
          Length = 124

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tcattgagtgcagcgttgatga 22
          ||||||||||||||||||||||
Sbjct: 18 tcattgagtgcagcgttgatga 39




>51742_ptc-miR397b:pmrd
          Length = 114

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 2  cattgagtgcagcgttgatga 22
          |||||||||||||||||||||
Sbjct: 12 cattgagtgcagcgttgatga 32




>48376_bna-miR397b:pmrd
          Length = 96

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  tcattgagtgcagcgttgatg 21
          |||||||||||||||||||||
Sbjct: 6  tcattgagtgcagcgttgatg 26




>48375_bna-miR397a:pmrd
          Length = 96

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  tcattgagtgcagcgttgatg 21
          |||||||||||||||||||||
Sbjct: 6  tcattgagtgcagcgttgatg 26




>47010_ath-miR397a:pmrd
          Length = 107

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  tcattgagtgcagcgttgatg 21
          |||||||||||||||||||||
Sbjct: 11 tcattgagtgcagcgttgatg 31




>54748_tae-miR2029:pmrd
          Length = 71

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 3  attgagtgcagcgttgatga 22
          ||||||||||||||||||||
Sbjct: 1  attgagtgcagcgttgatga 20




>54560_sly-miR397:pmrd
          Length = 116

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 3  attgagtgcagcgttgatga 22
          ||||||||||||||||||||
Sbjct: 20 attgagtgcagcgttgatga 39