miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54692_tae-miR1117:pmrd
Length = 118
Score = 234 bits (118), Expect = 1e-62
Identities = 118/118 (100%)
Strand = Plus / Plus
Query: 1 gtttgaaaatgggacctttagtaccggttcgtggcacgaaccgggactaaaggtcttcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttgaaaatgggacctttagtaccggttcgtggcacgaaccgggactaaaggtcttcaa 60
Query: 61 ccccattagttccggttcgtgccacaaaccgcgactaaaagggaggagctttagtcgc 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccccattagttccggttcgtgccacaaaccgcgactaaaagggaggagctttagtcgc 118
Score = 46.1 bits (23), Expect = 6e-06
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 25 cggttcgtggcacgaaccgggactaaaggtcttcaaccccattagttccggttcgtgcca 84
||||| |||||||||||||| ||||| || || || || ||||| |||||||||||||
Sbjct: 91 cggtttgtggcacgaaccggaactaatggggttgaagacctttagtcccggttcgtgcca 32
Query: 85 caaaccg 91
| |||||
Sbjct: 31 cgaaccg 25
>54706_tae-miR1131:pmrd
Length = 100
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 18 ttagtaccggttcgtggcacgaaccgggactaaaggt 54
||||||||||||| ||||||||||||| ||||||||
Sbjct: 59 ttagtaccggttcctggcacgaaccggtgctaaaggt 23
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 14 acctttagtaccggttcgtggcacgaaccgggactaa 50
|||||||| ||||||||||| || ||||||| |||||
Sbjct: 23 acctttagcaccggttcgtgccaggaaccggtactaa 59
>50072_osa-miRf10857-akr:pmrd
Length = 117
Score = 48.1 bits (24), Expect = 1e-06
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 10 tgggacctttagtaccggttcgtggcacgaaccgggactaaaggtctt 57
||||| ||||||| |||||||||| || |||||||||||||| ||||
Sbjct: 63 tgggatctttagtcccggttcgtgttaccaaccgggactaaagatctt 110
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
||||||| |||||| || ||||||||||||||||||
Sbjct: 105 ctttagtcccggttggtaacacgaaccgggactaaag 69
>50451_osa-miRf11236-akr:pmrd
Length = 110
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 11 gggacctttagtaccggttcgtggcacgaaccgggactaaag 52
|||| ||||||| |||||| ||| ||| ||||||||||||||
Sbjct: 66 gggatctttagtcccggttggtgtcacaaaccgggactaaag 107
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
||||||| |||||| ||| ||| ||||||||||||||
Sbjct: 107 ctttagtcccggtttgtgacaccaaccgggactaaag 71
>50450_osa-miRf11235-akr:pmrd
Length = 110
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 11 gggacctttagtaccggttcgtggcacgaaccgggactaaag 52
|||| ||||||| |||||| ||| ||| ||||||||||||||
Sbjct: 45 gggatctttagtcccggttggtgtcacaaaccgggactaaag 4
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
||||||| |||||| ||| ||| ||||||||||||||
Sbjct: 4 ctttagtcccggtttgtgacaccaaccgggactaaag 40
>50449_osa-miRf11234-akr:pmrd
Length = 110
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 11 gggacctttagtaccggttcgtggcacgaaccgggactaaag 52
|||| ||||||| |||||| ||| ||| ||||||||||||||
Sbjct: 45 gggatctttagtcccggttggtgtcacaaaccgggactaaag 4
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
||||||| |||||| ||| ||| ||||||||||||||
Sbjct: 4 ctttagtcccggtttgtgacaccaaccgggactaaag 40
>49825_osa-miRf10610-akr:pmrd
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 11 gggacctttagtaccggttcgtggcacgaaccgggactaaag 52
|||| |||||||||||||| || ||| ||||||||||||||
Sbjct: 47 gggatctttagtaccggttggtaacaccaaccgggactaaag 6
>51275_osa-miRf12060-akr:pmrd
Length = 81
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
|||||||||||||| || ||| ||||||||||||||
Sbjct: 47 ctttagtaccggttggtaacaccaaccgggactaaag 11
>51270_osa-miRf12055-akr:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
|||||||||||||| ||| || ||||||||||||||
Sbjct: 81 ctttagtaccggttggtgttaccaaccgggactaaag 45
>51242_osa-miRf12027-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
||||||| |||||||||| || ||||||||||||||
Sbjct: 101 ctttagttccggttcgtgttaccaaccgggactaaag 65
>51241_osa-miRf12026-akr:pmrd
Length = 112
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
||||||| |||||||||| || ||||||||||||||
Sbjct: 106 ctttagttccggttcgtgttaccaaccgggactaaag 70
>51234_osa-miRf12019-akr:pmrd
Length = 128
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
|||||||||||||| ||| || ||||||||||||||
Sbjct: 1 ctttagtaccggttggtgttaccaaccgggactaaag 37
>51233_osa-miRf12018-akr:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
|||||||||||||| ||| || ||||||||||||||
Sbjct: 3 ctttagtaccggttggtgttaccaaccgggactaaag 39
>51202_osa-miRf11987-akr:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
|||||||||||||| ||| || ||||||||||||||
Sbjct: 3 ctttagtaccggttggtgttaccaaccgggactaaag 39
>50822_osa-miRf11607-akr:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
|||||||||||||| ||| || ||||||||||||||
Sbjct: 3 ctttagtaccggttggtgttaccaaccgggactaaag 39
>50638_osa-miRf11423-akr:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
||||||| |||||| || |||| ||||||||||||||
Sbjct: 132 ctttagtcccggttggtagcaccaaccgggactaaag 96
>50603_osa-miRf11388-akr:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
|||||||||||||| ||| || ||||||||||||||
Sbjct: 2 ctttagtaccggttggtgttaccaaccgggactaaag 38
>50590_osa-miRf11375-akr:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
||||||| ||||||||| ||| ||||||||||||||
Sbjct: 1 ctttagtcccggttcgtaacaccaaccgggactaaag 37
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
||||||| |||||| ||| |||||||||||||||||
Sbjct: 37 ctttagtcccggttggtgttacgaaccgggactaaag 1
>50583_osa-miRf11368-akr:pmrd
Length = 129
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
||||||| |||||| || |||| ||||||||||||||
Sbjct: 1 ctttagtcccggttggtagcaccaaccgggactaaag 37
>50582_osa-miRf11367-akr:pmrd
Length = 129
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
||||||| |||||| || |||| ||||||||||||||
Sbjct: 129 ctttagtcccggttggtagcaccaaccgggactaaag 93
>50361_osa-miRf11146-akr:pmrd
Length = 153
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
|||||||||||||| ||| || ||||||||||||||
Sbjct: 3 ctttagtaccggttggtgttaccaaccgggactaaag 39
>50269_osa-miRf11054-akr:pmrd
Length = 80
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
|||||||||||||| ||| || ||||||||||||||
Sbjct: 1 ctttagtaccggttggtgttaccaaccgggactaaag 37
>49848_osa-miRf10633-akr:pmrd
Length = 65
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
|||||||||||||| || ||| ||||||||||||||
Sbjct: 25 ctttagtaccggttagtaacaccaaccgggactaaag 61
>49828_osa-miRf10613-akr:pmrd
Length = 129
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
|||||||||||||| || ||| ||||||||||||||
Sbjct: 1 ctttagtaccggttggtaacaccaaccgggactaaag 37
>49827_osa-miRf10612-akr:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
|||||||||||||| || ||| ||||||||||||||
Sbjct: 131 ctttagtaccggttggtaacaccaaccgggactaaag 95
>49826_osa-miRf10611-akr:pmrd
Length = 135
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
|||||||||||||| || ||| ||||||||||||||
Sbjct: 4 ctttagtaccggttggtaacaccaaccgggactaaag 40
>49683_osa-miRf10468-akr:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
|||||||||||||| ||| || ||||||||||||||
Sbjct: 3 ctttagtaccggttggtgttaccaaccgggactaaag 39
>49605_osa-miRf10390-akr:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
|||||||||||||| || ||| ||||||||||||||
Sbjct: 45 ctttagtaccggttggtaacaccaaccgggactaaag 81
>49604_osa-miRf10389-akr:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
|||||||||||||| || ||| ||||||||||||||
Sbjct: 45 ctttagtaccggttggtaacaccaaccgggactaaag 81
>49586_osa-miRf10371-akr:pmrd
Length = 90
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
|||||||||||||| ||| || ||||||||||||||
Sbjct: 87 ctttagtaccggttggtgttaccaaccgggactaaag 51
>49585_osa-miRf10370-akr:pmrd
Length = 90
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
|||||||||||||| ||| || ||||||||||||||
Sbjct: 4 ctttagtaccggttggtgttaccaaccgggactaaag 40
>49543_osa-miRf10328-akr:pmrd
Length = 92
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
||||||| |||||| || |||| ||||||||||||||
Sbjct: 50 ctttagtcccggttggtagcaccaaccgggactaaag 86
>49506_osa-miRf10291-akr:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
|||||||||||||| ||| || ||||||||||||||
Sbjct: 81 ctttagtaccggttggtgttaccaaccgggactaaag 45
>49478_osa-miRf10263-akr:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaag 52
|||| ||||||||||||| || ||||||||||||||
Sbjct: 52 cttttgtaccggttcgtgttaccaaccgggactaaag 88
>51235_osa-miRf12020-akr:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 17 tttagtaccggttcgtggcacgaaccgggactaaag 52
||||||||||||| ||| || ||||||||||||||
Sbjct: 126 tttagtaccggttggtgttaccaaccgggactaaag 91
>50445_osa-miRf11230-akr:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaa 51
||||||| |||||| || |||||||||||||||||
Sbjct: 67 ctttagtcccggttggtaacacgaaccgggactaaa 102
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 17 tttagtaccggttcgtggcacgaaccgggactaaag 52
|||||| |||||||||| || ||||||||||||||
Sbjct: 102 tttagtcccggttcgtgttaccaaccgggactaaag 67
>50444_osa-miRf11229-akr:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 16 ctttagtaccggttcgtggcacgaaccgggactaaa 51
||||||| |||||| || |||||||||||||||||
Sbjct: 67 ctttagtcccggttggtaacacgaaccgggactaaa 102
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 17 tttagtaccggttcgtggcacgaaccgggactaaag 52
|||||| |||||||||| || ||||||||||||||
Sbjct: 102 tttagtcccggttcgtgttaccaaccgggactaaag 67
