miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>54705_tae-miR1130:pmrd
          Length = 122

 Score =  194 bits (98), Expect = 1e-50
 Identities = 114/122 (93%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaatgtcttatactccctccgtctcgtaatgtaagacgtttttataagctatgttagtct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aaatgtcttatactccctccgtctcgtaatgtaagacgtttttataagctatgttagtct 60

                                                                       
Query: 61  gtnnnnnnnngtctttgcaaaaacgtcttacattatgggacggagtggtagtatttgcaa 120
           ||        ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtaaaaaaaagtctttgcaaaaacgtcttacattatgggacggagtggtagtatttgcaa 120

             
Query: 121 cg 122
           ||
Sbjct: 121 cg 122




>49621_osa-miRf10406-akr:pmrd
          Length = 115

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 9  tatactccctccgtctcgtaatgt 32
          ||||||||||||||| ||||||||
Sbjct: 8  tatactccctccgtcccgtaatgt 31