miRNEST 2.0, an integrative microRNA resource :: BLAST
>49004_osa-miR442:pmrd
Length = 233
Score = 246 bits (124), Expect = 7e-66
Identities = 163/176 (92%)
Strand = Plus / Plus
Query: 63 tgtaaattgcgagacgaatcttttgagcctaattacgtcttgatttgacaatgtggtgct 122
|||||||||||||||||||||||| ||||||||| | | |||| |||||||||||||||
Sbjct: 57 tgtaaattgcgagacgaatcttttaagcctaattgctccatgatctgacaatgtggtgct 116
Query: 123 acagtaaacatttgctaatgacgaattaattaggcttaatagattcgtctcgcagtttac 182
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 117 acagtaaacatttgctaatgacggattaattaggcttaataaattcgtctcgcagtttac 176
Query: 183 aggcgaaatctgtaatctgttttgttattagtctacgtttaatacttcaaatgtgt 238
|| || | |||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 177 agacggattctgtaatttgttttgttattagtctacgttaaatacttcaaatgtgt 232
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 150 aattaggcttaatagattcgtctcgcagtttaca 183
|||||||||||| |||||||||||||| ||||||
Sbjct: 90 aattaggcttaaaagattcgtctcgcaatttaca 57
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 155 bits (78), Expect = 2e-38
Identities = 117/130 (90%)
Strand = Plus / Plus
Query: 58 ttgcatgtaaattgcgagacgaatcttttgagcctaattacgtcttgatttgacaatgtg 117
|||| |||||||||||||||| ||||||| ||||||||| | | | |||||||||||||
Sbjct: 7 ttgcgtgtaaattgcgagacggatcttttaagcctaattgcaccataatttgacaatgtg 66
Query: 118 gtgctacagtaaacatttgctaatgacgaattaattaggcttaatagattcgtctcgcag 177
|||||| ||||||||||||||||||| | ||||||||||||||||| ||||||||||| |
Sbjct: 67 gtgctaaagtaaacatttgctaatgatggattaattaggcttaataaattcgtctcgcgg 126
Query: 178 tttacaggcg 187
||||||||||
Sbjct: 127 tttacaggcg 136
Score = 44.1 bits (22), Expect = 5e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 150 aattaggcttaatagattcgtctcgcagtttaca 183
|||||||||||| |||| ||||||||| ||||||
Sbjct: 45 aattaggcttaaaagatccgtctcgcaatttaca 12
>49008_osa-miR445a:pmrd
Length = 268
Score = 109 bits (55), Expect = 1e-24
Identities = 94/107 (87%)
Strand = Plus / Minus
Query: 71 gcgagacgaatcttttgagcctaattacgtcttgatttgacaatgtggtgctacagtaaa 130
||||||||||||||||||| |||||||| | ||||||||||||||| ||||||||||||
Sbjct: 186 gcgagacgaatcttttgagtctaattacaccatgatttgacaatgtgatgctacagtaaa 127
Query: 131 catttgctaatgacgaattaattaggcttaatagattcgtctcgcag 177
| ||| |||| | | ||||||||||||||| | |||||||||||||
Sbjct: 126 cttttcataattatggattaattaggcttaaaaaattcgtctcgcag 80
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 70 tgcgagacgaatcttttgagcctaatta 97
|||||||||||| |||| ||||||||||
Sbjct: 81 tgcgagacgaattttttaagcctaatta 108
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 93.7 bits (47), Expect = 6e-20
Identities = 89/103 (86%)
Strand = Plus / Plus
Query: 66 aaattgcgagacgaatcttttgagcctaattacgtcttgatttgacaatgtggtgctaca 125
|||| |||||||||||||||| |||||||| || | | |||| ||||||| ||| ||||
Sbjct: 14 aaatcgcgagacgaatcttttaggcctaattgcgccataatttaacaatgttgtggtaca 73
Query: 126 gtaaacatttgctaatgacgaattaattaggcttaatagattc 168
||||||||||||||||||| ||||||||||||| ||| ||||
Sbjct: 74 ataaacatttgctaatgacggattaattaggcttcataaattc 116
>50516_osa-miRf11301-akr:pmrd
Length = 139
Score = 77.8 bits (39), Expect = 4e-15
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 47 aattacacagtttgcatgtaaattgcgagacgaatcttttgagcctaatta 97
|||| ||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 93 aattgcacagtttgcatggaaatcgcgagacgaatcttttgagcctaatta 43
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 65.9 bits (33), Expect = 1e-11
Identities = 107/130 (82%), Gaps = 5/130 (3%)
Strand = Plus / Minus
Query: 60 gcatgtaaattgcgagacgaatcttttgagcctaattacgtcttgatttgacaatgtggt 119
|||||||||| ||||||| ||||||||||||||||||| || ||||| | || ||
Sbjct: 128 gcatgtaaatcgcgagacaaatcttttgagcctaattagttcatgattagcca--taagt 71
Query: 120 gctacagtaa---acatttgctaatgacgaattaattaggcttaatagattcgtctcgca 176
|||||||||| |||| || |||||||| ||||||||||| || |||||||||||||
Sbjct: 70 gctacagtaacctacatgtgttaatgacggcttaattaggctcaaaagattcgtctcgcg 11
Query: 177 gtttacaggc 186
|||| |||||
Sbjct: 10 gtttccaggc 1
Score = 54.0 bits (27), Expect = 5e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 71 gcgagacgaatcttttgagcctaatta 97
|||||||||||||||||||||||||||
Sbjct: 12 gcgagacgaatcttttgagcctaatta 38
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 63.9 bits (32), Expect = 5e-11
Identities = 58/66 (87%), Gaps = 3/66 (4%)
Strand = Plus / Minus
Query: 118 gtgctacagtaa---acatttgctaatgacgaattaattaggcttaatagattcgtctcg 174
|||||||||||| |||| ||||||||||| |||||||||||| || ||||||||||||
Sbjct: 68 gtgctacagtaatccacatgtgctaatgacggattaattaggctcaaaagattcgtctcg 9
Query: 175 cagttt 180
| ||||
Sbjct: 8 cggttt 3
Score = 54.0 bits (27), Expect = 5e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 71 gcgagacgaatcttttgagcctaatta 97
|||||||||||||||||||||||||||
Sbjct: 8 gcgagacgaatcttttgagcctaatta 34
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 66 aaattgcgagacgaatcttttgagcctaatta 97
|||| |||||||||||||||| ||||||||||
Sbjct: 121 aaatcgcgagacgaatcttttaagcctaatta 90
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 149 taattaggcttaatagattcgtctcgc 175
||||||||||||| |||||||||||||
Sbjct: 90 taattaggcttaaaagattcgtctcgc 116
>51304_osa-miRf12089-akr:pmrd
Length = 120
Score = 61.9 bits (31), Expect = 2e-10
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 130 acatttgctaatgacgaattaattaggcttaatagattcgtct 172
|||| |||||||||||||||||||||||| || ||||||||||
Sbjct: 53 acatgtgctaatgacgaattaattaggctcaaaagattcgtct 11
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 agacgaatcttttgagcctaatta 97
||||||||||||||||||||||||
Sbjct: 11 agacgaatcttttgagcctaatta 34
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 58.0 bits (29), Expect = 3e-09
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 130 acatttgctaatgacgaattaattaggcttaatagattcgtctcgcagtttacaggc 186
|||| ||||||| ||| |||||||||||| || ||||||||||||| |||| |||||
Sbjct: 72 acatgtgctaataacggattaattaggctcaaaagattcgtctcgcggtttccaggc 128
Score = 54.0 bits (27), Expect = 5e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 71 gcgagacgaatcttttgagcctaatta 97
|||||||||||||||||||||||||||
Sbjct: 117 gcgagacgaatcttttgagcctaatta 91
Score = 50.1 bits (25), Expect = 8e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 73 gagacgaatcttttgagcctaatta 97
|||||||||||||||||||||||||
Sbjct: 14 gagacgaatcttttgagcctaatta 38
>49733_osa-miRf10518-akr:pmrd
Length = 122
Score = 54.0 bits (27), Expect = 5e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 71 gcgagacgaatcttttgagcctaatta 97
|||||||||||||||||||||||||||
Sbjct: 9 gcgagacgaatcttttgagcctaatta 35
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 72 cgagacgaatcttttgagcctaatta 97
||||||||||||||||||||||||||
Sbjct: 113 cgagacgaatcttttgagcctaatta 88
Score = 48.1 bits (24), Expect = 3e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 137 ctaatgacgaattaattaggcttaatagattcgtctcgcagttt 180
||||||||| ||||||||||| || ||||||||||||| ||||
Sbjct: 47 ctaatgacggcttaattaggctcaaaagattcgtctcgcggttt 4
>51249_osa-miRf12034-akr:pmrd
Length = 121
Score = 52.0 bits (26), Expect = 2e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 135 tgctaatgacgaattaattaggcttaatagattcgtctcgcagttt 180
||||||||||| |||||||||||| || |||||| |||||| ||||
Sbjct: 74 tgctaatgacggattaattaggctcaagagattcatctcgcggttt 119
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 agacgaatcttttgagcctaatta 97
||||||||||||||||||||||||
Sbjct: 12 agacgaatcttttgagcctaatta 35
>49652_osa-miRf10437-akr:pmrd
Length = 120
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 66 aaattgcgagacgaatcttttgagcctaatta 97
|||| ||||||| |||||||||||||||||||
Sbjct: 3 aaatcgcgagacaaatcttttgagcctaatta 34
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 71 gcgagacgaatcttttgagcctaatta 97
|||||||||||||||||||| ||||||
Sbjct: 113 gcgagacgaatcttttgagcataatta 87
Score = 40.1 bits (20), Expect = 8e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 137 ctaatgacgaattaattaggcttaatagattcgtctcgcagttt 180
||||||| | |||||||| ||| || ||||||||||||| ||||
Sbjct: 75 ctaatgatggattaattatgctcaaaagattcgtctcgcggttt 118
>49015_osa-miR445h:pmrd
Length = 277
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 71 gcgagacgaatcttttgagcctaattac 98
||||||||||||||||||| ||||||||
Sbjct: 182 gcgagacgaatcttttgagtctaattac 155
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 147 attaattaggcttaatagattcgtctcgcag 177
||||||||||||||| | |||||||||||||
Sbjct: 123 attaattaggcttaaaaaattcgtctcgcag 93
Score = 44.1 bits (22), Expect = 5e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 201 gttttgttattagtctacgtttaatacttcaaat 234
||||| ||||||||||| |||||||||| |||||
Sbjct: 69 gtttttttattagtctatgtttaatactccaaat 36
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 70 tgcgagacgaatcttttgagcctaatta 97
|||||||||||| |||| ||||||||||
Sbjct: 94 tgcgagacgaattttttaagcctaatta 121
>49013_osa-miR445f:pmrd
Length = 305
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 71 gcgagacgaatcttttgagcctaattac 98
||||||||||||||||||| ||||||||
Sbjct: 197 gcgagacgaatcttttgagtctaattac 170
Score = 44.1 bits (22), Expect = 5e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 201 gttttgttattagtctacgtttaatacttcaaat 234
||||| ||||||||||| |||||||||| |||||
Sbjct: 84 gtttttttattagtctatgtttaatactccaaat 51
>49012_osa-miR445e:pmrd
Length = 265
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 71 gcgagacgaatcttttgagcctaattac 98
||||||||||||||||||| ||||||||
Sbjct: 176 gcgagacgaatcttttgagtctaattac 149
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 147 attaattaggcttaatagattcgtctcgcag 177
||||||||||||||| | |||||||||||||
Sbjct: 117 attaattaggcttaaaaaattcgtctcgcag 87
Score = 44.1 bits (22), Expect = 5e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 201 gttttgttattagtctacgtttaatacttcaaat 234
||||| ||||||||||| |||||||||| |||||
Sbjct: 63 gtttttttattagtctatgtttaatactccaaat 30
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 70 tgcgagacgaatcttttgagcctaatta 97
|||||||||||| |||| ||||||||||
Sbjct: 88 tgcgagacgaattttttaagcctaatta 115
>49009_osa-miR445b:pmrd
Length = 264
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 71 gcgagacgaatcttttgagcctaattac 98
||||||||||||||||||| ||||||||
Sbjct: 175 gcgagacgaatcttttgagtctaattac 148
>49014_osa-miR445g:pmrd
Length = 275
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 147 attaattaggcttaatagattcgtctcgcag 177
||||||||||||||| | |||||||||||||
Sbjct: 122 attaattaggcttaaaaaattcgtctcgcag 92
Score = 44.1 bits (22), Expect = 5e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 201 gttttgttattagtctacgtttaatacttcaaat 234
||||| ||||||||||| |||||||||| |||||
Sbjct: 68 gtttttttattagtctatgtttaatactccaaat 35
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 70 tgcgagacgaatcttttgagcctaatta 97
|||||||||||| |||| ||||||||||
Sbjct: 93 tgcgagacgaattttttaagcctaatta 120
>49010_osa-miR445c:pmrd
Length = 260
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 147 attaattaggcttaatagattcgtctcgcag 177
||||||||||||||| | |||||||||||||
Sbjct: 115 attaattaggcttaaaaaattcgtctcgcag 85
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 72 cgagacgaatcttttgagcctaattac 98
||||||||||||||| |||||||||||
Sbjct: 173 cgagacgaatcttttaagcctaattac 147
Score = 44.1 bits (22), Expect = 5e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 201 gttttgttattagtctacgtttaatacttcaaat 234
||||| ||||||||||| |||||||||| |||||
Sbjct: 61 gtttttttattagtctatgtttaatactccaaat 28
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 149 taattaggcttaatagattcgtctcg 174
||||||||||||| ||||||||||||
Sbjct: 148 taattaggcttaaaagattcgtctcg 173
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 70 tgcgagacgaatcttttgagcctaatta 97
|||||||||||| |||| ||||||||||
Sbjct: 86 tgcgagacgaattttttaagcctaatta 113
>51205_osa-miRf11990-akr:pmrd
Length = 135
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 147 attaattaggcttaatagattcgtctcgc 175
|||||||||||| |||||||| |||||||
Sbjct: 39 attaattaggctcaatagatttgtctcgc 11
>49011_osa-miR445d:pmrd
Length = 312
Score = 42.1 bits (21), Expect = 2e-04
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 113 atgtggtgctacagtaaacatttgctaatgacgaattaattaggcttaa 161
||||| ||||||| ||||||| || |||| | | |||||||||||||||
Sbjct: 145 atgtgatgctacactaaacatgtgttaattatggattaattaggcttaa 193
