miRNEST 2.0, an integrative microRNA resource :: BLAST
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 135 bits (68), Expect = 8e-33
Identities = 104/116 (89%)
Strand = Plus / Plus
Query: 4 aaactgcgagacgaatcttttgagactaattaagccatcattagcacatgtgggttacgg 63
|||| ||||||||||||||||||| ||||||||||| |||||| ||||||| |||||| |
Sbjct: 7 aaaccgcgagacgaatcttttgagcctaattaagccgtcattaacacatgtaggttactg 66
Query: 64 tagtacttatggctaatcacggactaattaggcttcaaagattcgtctcgcgattt 119
||| ||||||||||||||| | |||||||||||| ||||||| ||||||||||||
Sbjct: 67 tagcacttatggctaatcatgaactaattaggctcaaaagatttgtctcgcgattt 122
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 88 taattaggcttcaaagattcgtctcgcgatttcc 121
|||||||||| |||||||||||||||| |||||
Sbjct: 38 taattaggctcaaaagattcgtctcgcggtttcc 5
>49733_osa-miRf10518-akr:pmrd
Length = 122
Score = 131 bits (66), Expect = 1e-31
Identities = 99/110 (90%)
Strand = Plus / Plus
Query: 4 aaactgcgagacgaatcttttgagactaattaagccatcattagcacatgtgggttacgg 63
|||| ||||||||||||||||||| ||||||||||| ||||||| ||||||||||||| |
Sbjct: 4 aaaccgcgagacgaatcttttgagcctaattaagccgtcattagtacatgtgggttactg 63
Query: 64 tagtacttatggctaatcacggactaattaggcttcaaagattcgtctcg 113
||| | |||||| ||||||| ||||||||||||| ||||||||||||||
Sbjct: 64 tagcatttatggttaatcacagactaattaggctcaaaagattcgtctcg 113
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 88 taattaggcttcaaagattcgtctcgcgatttcc 121
|||||||||| |||||||||||||||| |||||
Sbjct: 35 taattaggctcaaaagattcgtctcgcggtttcc 2
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 cgagacgaatcttttgagactaatta 35
|||||||||||||||||| |||||||
Sbjct: 113 cgagacgaatcttttgagcctaatta 88
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 125 bits (63), Expect = 8e-30
Identities = 107/121 (88%), Gaps = 3/121 (2%)
Strand = Plus / Plus
Query: 4 aaactgcgagacgaatcttttgagactaattaagccatcattagcacatgtgggttacgg 63
|||| ||||||||||||||||||| |||||||| || |||||||||||||||| |||| |
Sbjct: 3 aaaccgcgagacgaatcttttgagcctaattaatccgtcattagcacatgtggattactg 62
Query: 64 tagtacttatggctaatc---acggactaattaggcttcaaagattcgtctcgcgatttc 120
||| |||||||||||||| | ||||||||||||| |||||||||||||||||||||
Sbjct: 63 tagcacttatggctaatcgtgtagtactaattaggcttaaaagattcgtctcgcgatttc 122
Query: 121 c 121
|
Sbjct: 123 c 123
Score = 54.0 bits (27), Expect = 2e-08
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 75 gctaatcacggactaattaggcttcaaagattcgtctcgcgatttcc 121
|||||| ||||| |||||||||| |||||||||||||||| |||||
Sbjct: 47 gctaatgacggattaattaggctcaaaagattcgtctcgcggtttcc 1
>49652_osa-miRf10437-akr:pmrd
Length = 120
Score = 115 bits (58), Expect = 8e-27
Identities = 103/118 (87%)
Strand = Plus / Minus
Query: 4 aaactgcgagacgaatcttttgagactaattaagccatcattagcacatgtgggttacgg 63
|||| ||||||||||||||||||| ||||||| |||||||||| | || ||||||||
Sbjct: 118 aaaccgcgagacgaatcttttgagcataattaatccatcattagtatatttgggttacta 59
Query: 64 tagtacttatggctaatcacggactaattaggcttcaaagattcgtctcgcgatttcc 121
||| | ||||||||||||| |||||||||||||| ||||||| ||||||||||||||
Sbjct: 58 tagcatttatggctaatcatggactaattaggctcaaaagatttgtctcgcgatttcc 1
Score = 40.1 bits (20), Expect = 4e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 9 gcgagacgaatcttttgagactaattaagccatcattagc 48
||||||| ||||||||||| ||||||| |||| ||||||
Sbjct: 8 gcgagacaaatcttttgagcctaattagtccatgattagc 47
>51304_osa-miRf12089-akr:pmrd
Length = 120
Score = 107 bits (54), Expect = 2e-24
Identities = 96/110 (87%)
Strand = Plus / Plus
Query: 12 agacgaatcttttgagactaattaagccatcattagcacatgtgggttacggtagtactt 71
|||||||||||||||| |||||||| | ||||||||||||||||||| | ||| ||||
Sbjct: 11 agacgaatcttttgagcctaattaattcgtcattagcacatgtgggttgctatagcactt 70
Query: 72 atggctaatcacggactaattaggcttcaaagattcgtctcgcgatttcc 121
||||| ||||| || |||||||| || ||||||||||||||||||||||
Sbjct: 71 atggcaaatcatgggctaattagactcaaaagattcgtctcgcgatttcc 120
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 gcgagacgaatcttttgagactaatta 35
||||||||||||||||||| |||||||
Sbjct: 113 gcgagacgaatcttttgagtctaatta 87
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 107 bits (54), Expect = 2e-24
Identities = 102/118 (86%)
Strand = Plus / Minus
Query: 4 aaactgcgagacgaatcttttgagactaattaagccatcattagcacatgtgggttacgg 63
|||| ||||||||||||||||||| |||||||| || | |||||||||||||||||| |
Sbjct: 122 aaaccgcgagacgaatcttttgagcctaattaatccgttattagcacatgtgggttattg 63
Query: 64 tagtacttatggctaatcacggactaattaggcttcaaagattcgtctcgcgatttcc 121
||| |||||||| |||||| |||||||||||| ||||||||||||| |||||||
Sbjct: 62 tagcacttatggttaatcatatactaattaggctcaaaagattcgtctcatgatttcc 5
Score = 54.0 bits (27), Expect = 2e-08
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 75 gctaatcacggactaattaggcttcaaagattcgtctcgcgatttcc 121
|||||| ||||| |||||||||| |||||||||||||||| |||||
Sbjct: 78 gctaataacggattaattaggctcaaaagattcgtctcgcggtttcc 124
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 gagacgaatcttttgagactaatta 35
||||||||||||||||| |||||||
Sbjct: 14 gagacgaatcttttgagcctaatta 38
>51249_osa-miRf12034-akr:pmrd
Length = 121
Score = 103 bits (52), Expect = 3e-23
Identities = 100/116 (86%)
Strand = Plus / Minus
Query: 4 aaactgcgagacgaatcttttgagactaattaagccatcattagcacatgtgggttacgg 63
|||| |||||| |||||| ||||| |||||||| || |||||||||||| ||||||| |
Sbjct: 119 aaaccgcgagatgaatctcttgagcctaattaatccgtcattagcacatacgggttactg 60
Query: 64 tagtacttatggctaatcacggactaattaggcttcaaagattcgtctcgcgattt 119
||| |||||| ||||||| |||||||||||||| |||||||||||| |||||||
Sbjct: 59 tagcacttataactaatcatggactaattaggctcaaaagattcgtcttgcgattt 4
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 agacgaatcttttgagactaatta 35
|||||||||||||||| |||||||
Sbjct: 12 agacgaatcttttgagcctaatta 35
>50516_osa-miRf11301-akr:pmrd
Length = 139
Score = 89.7 bits (45), Expect = 4e-19
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 49 acatgtgggttacggtagtacttatggctaatcacggactaattaggcttcaaagattcg 108
||||||||||||| |||| |||||||| |||||| ||||||||||||| |||||||||
Sbjct: 4 acatgtgggttactgtagcacttatggttaatcatagactaattaggctcaaaagattcg 63
Query: 109 tctcgcgatttcc 121
|||||||||||||
Sbjct: 64 tctcgcgatttcc 76
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 gcgagacgaatcttttgagactaatta 35
||||||||||||||||||| |||||||
Sbjct: 69 gcgagacgaatcttttgagcctaatta 43
>50155_osa-miRf10940-akr:pmrd
Length = 96
Score = 56.0 bits (28), Expect = 6e-09
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 50 catgtgggttacggtagtacttatggctaatcacggactaattaggcttcaaagattcgt 109
|||||||||| | ||| ||||||||||||||| ||||||||||| || ||||||| ||
Sbjct: 66 catgtgggttgctatagcacttatggctaatcatggactaattagactcaaaagatttgt 7
Query: 110 ctcg 113
||||
Sbjct: 6 ctcg 3
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 89 aattaggcttcaaagattcgtctcgcgatttcc 121
|||||||| | ||||||||||||||||||||||
Sbjct: 44 aattaggcctaaaagattcgtctcgcgatttcc 12
Score = 46.1 bits (23), Expect = 6e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 75 gctaatcacggactaattaggcttcaaagattcgtctcgcgatttcc 121
|||||| ||||| ||||||||||||| | |||| ||| |||||||||
Sbjct: 84 gctaatgacggattaattaggcttcataaattcatcttgcgatttcc 130
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 46.1 bits (23), Expect = 6e-06
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 4 aaactgcgagacgaatcttttgagactaattaagccatcattagcacatgt 54
|||| ||||||||||| | || || |||||||| |||||||||||| ||||
Sbjct: 129 aaaccgcgagacgaatttattaagcctaattaatccatcattagcaaatgt 79
>49015_osa-miR445h:pmrd
Length = 277
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 gcgagacgaatcttttgagactaatta 35
||||||||||||||||||| |||||||
Sbjct: 182 gcgagacgaatcttttgagtctaatta 156
Score = 40.1 bits (20), Expect = 4e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 7 ctgcgagacgaatcttttgagactaattaagccatcatta 46
||||||||||||| |||| || |||||||| |||| ||||
Sbjct: 93 ctgcgagacgaattttttaagcctaattaatccataatta 132
>49013_osa-miR445f:pmrd
Length = 305
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 gcgagacgaatcttttgagactaatta 35
||||||||||||||||||| |||||||
Sbjct: 197 gcgagacgaatcttttgagtctaatta 171
>49012_osa-miR445e:pmrd
Length = 265
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 gcgagacgaatcttttgagactaatta 35
||||||||||||||||||| |||||||
Sbjct: 176 gcgagacgaatcttttgagtctaatta 150
Score = 40.1 bits (20), Expect = 4e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 7 ctgcgagacgaatcttttgagactaattaagccatcatta 46
||||||||||||| |||| || |||||||| |||| ||||
Sbjct: 87 ctgcgagacgaattttttaagcctaattaatccataatta 126
>49009_osa-miR445b:pmrd
Length = 264
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 gcgagacgaatcttttgagactaatta 35
||||||||||||||||||| |||||||
Sbjct: 175 gcgagacgaatcttttgagtctaatta 149
>49008_osa-miR445a:pmrd
Length = 268
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 gcgagacgaatcttttgagactaatta 35
||||||||||||||||||| |||||||
Sbjct: 186 gcgagacgaatcttttgagtctaatta 160
Score = 40.1 bits (20), Expect = 4e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 7 ctgcgagacgaatcttttgagactaattaagccatcatta 46
||||||||||||| |||| || |||||||| |||| ||||
Sbjct: 80 ctgcgagacgaattttttaagcctaattaatccataatta 119
>49004_osa-miR442:pmrd
Length = 233
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 89 aattaggcttcaaagattcgtctcgcgattt 119
|||||||||| ||||||||||||||| ||||
Sbjct: 90 aattaggcttaaaagattcgtctcgcaattt 60
Score = 46.1 bits (23), Expect = 6e-06
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 4 aaactgcgagacgaatcttttgagactaattaagccatcattagcacatgt 54
|||||||||||||||| | || || |||||||| || ||||||||| ||||
Sbjct: 174 aaactgcgagacgaatttattaagcctaattaatccgtcattagcaaatgt 124
Score = 40.1 bits (20), Expect = 4e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 75 gctaatcacggactaattaggcttcaaagattcgtctcgc 114
|||||| ||||| ||||||||||| | | |||||||||||
Sbjct: 130 gctaatgacggattaattaggcttaataaattcgtctcgc 169
>49010_osa-miR445c:pmrd
Length = 260
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 88 taattaggcttcaaagattcgtctcg 113
||||||||||| ||||||||||||||
Sbjct: 148 taattaggcttaaaagattcgtctcg 173
Score = 40.1 bits (20), Expect = 4e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 7 ctgcgagacgaatcttttgagactaattaagccatcatta 46
||||||||||||| |||| || |||||||| |||| ||||
Sbjct: 85 ctgcgagacgaattttttaagcctaattaatccataatta 124
>49014_osa-miR445g:pmrd
Length = 275
Score = 40.1 bits (20), Expect = 4e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 7 ctgcgagacgaatcttttgagactaattaagccatcatta 46
||||||||||||| |||| || |||||||| |||| ||||
Sbjct: 92 ctgcgagacgaattttttaagcctaattaatccataatta 131
