miRNEST 2.0, an integrative microRNA resource :: BLAST
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 139 bits (70), Expect = 7e-34
Identities = 109/122 (89%)
Strand = Plus / Plus
Query: 12 gcctgaaaactgcgagacgaatcttttgagactaattaagccatcattagcacatgtggg 71
||||| |||| ||||||||||||||||||| ||||||||||| |||||| ||||||| ||
Sbjct: 1 gcctggaaaccgcgagacgaatcttttgagcctaattaagccgtcattaacacatgtagg 60
Query: 72 ttacggtagtacttatggctaatcacggactaattaggcttcaaagattcgtctcgcgat 131
|||| |||| ||||||||||||||| | |||||||||||| ||||||| ||||||||||
Sbjct: 61 ttactgtagcacttatggctaatcatgaactaattaggctcaaaagatttgtctcgcgat 120
Query: 132 tt 133
||
Sbjct: 121 tt 122
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 102 taattaggcttcaaagattcgtctcgcgatttcc 135
|||||||||| |||||||||||||||| |||||
Sbjct: 38 taattaggctcaaaagattcgtctcgcggtttcc 5
>49733_osa-miRf10518-akr:pmrd
Length = 122
Score = 131 bits (66), Expect = 2e-31
Identities = 99/110 (90%)
Strand = Plus / Plus
Query: 18 aaactgcgagacgaatcttttgagactaattaagccatcattagcacatgtgggttacgg 77
|||| ||||||||||||||||||| ||||||||||| ||||||| ||||||||||||| |
Sbjct: 4 aaaccgcgagacgaatcttttgagcctaattaagccgtcattagtacatgtgggttactg 63
Query: 78 tagtacttatggctaatcacggactaattaggcttcaaagattcgtctcg 127
||| | |||||| ||||||| ||||||||||||| ||||||||||||||
Sbjct: 64 tagcatttatggttaatcacagactaattaggctcaaaagattcgtctcg 113
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 102 taattaggcttcaaagattcgtctcgcgatttcc 135
|||||||||| |||||||||||||||| |||||
Sbjct: 35 taattaggctcaaaagattcgtctcgcggtttcc 2
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 24 cgagacgaatcttttgagactaatta 49
|||||||||||||||||| |||||||
Sbjct: 113 cgagacgaatcttttgagcctaatta 88
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 125 bits (63), Expect = 1e-29
Identities = 107/121 (88%), Gaps = 3/121 (2%)
Strand = Plus / Plus
Query: 18 aaactgcgagacgaatcttttgagactaattaagccatcattagcacatgtgggttacgg 77
|||| ||||||||||||||||||| |||||||| || |||||||||||||||| |||| |
Sbjct: 3 aaaccgcgagacgaatcttttgagcctaattaatccgtcattagcacatgtggattactg 62
Query: 78 tagtacttatggctaatc---acggactaattaggcttcaaagattcgtctcgcgatttc 134
||| |||||||||||||| | ||||||||||||| |||||||||||||||||||||
Sbjct: 63 tagcacttatggctaatcgtgtagtactaattaggcttaaaagattcgtctcgcgatttc 122
Query: 135 c 135
|
Sbjct: 123 c 123
Score = 54.0 bits (27), Expect = 3e-08
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 89 gctaatcacggactaattaggcttcaaagattcgtctcgcgatttcc 135
|||||| ||||| |||||||||| |||||||||||||||| |||||
Sbjct: 47 gctaatgacggattaattaggctcaaaagattcgtctcgcggtttcc 1
>49652_osa-miRf10437-akr:pmrd
Length = 120
Score = 115 bits (58), Expect = 1e-26
Identities = 103/118 (87%)
Strand = Plus / Minus
Query: 18 aaactgcgagacgaatcttttgagactaattaagccatcattagcacatgtgggttacgg 77
|||| ||||||||||||||||||| ||||||| |||||||||| | || ||||||||
Sbjct: 118 aaaccgcgagacgaatcttttgagcataattaatccatcattagtatatttgggttacta 59
Query: 78 tagtacttatggctaatcacggactaattaggcttcaaagattcgtctcgcgatttcc 135
||| | ||||||||||||| |||||||||||||| ||||||| ||||||||||||||
Sbjct: 58 tagcatttatggctaatcatggactaattaggctcaaaagatttgtctcgcgatttcc 1
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 23 gcgagacgaatcttttgagactaattaagccatcattagc 62
||||||| ||||||||||| ||||||| |||| ||||||
Sbjct: 8 gcgagacaaatcttttgagcctaattagtccatgattagc 47
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 111 bits (56), Expect = 1e-25
Identities = 107/124 (86%)
Strand = Plus / Minus
Query: 12 gcctgaaaactgcgagacgaatcttttgagactaattaagccatcattagcacatgtggg 71
||||| |||| ||||||||||||||||||| |||||||| || | |||||||||||||||
Sbjct: 128 gcctggaaaccgcgagacgaatcttttgagcctaattaatccgttattagcacatgtggg 69
Query: 72 ttacggtagtacttatggctaatcacggactaattaggcttcaaagattcgtctcgcgat 131
||| |||| |||||||| |||||| |||||||||||| ||||||||||||| |||
Sbjct: 68 ttattgtagcacttatggttaatcatatactaattaggctcaaaagattcgtctcatgat 9
Query: 132 ttcc 135
||||
Sbjct: 8 ttcc 5
Score = 54.0 bits (27), Expect = 3e-08
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 89 gctaatcacggactaattaggcttcaaagattcgtctcgcgatttcc 135
|||||| ||||| |||||||||| |||||||||||||||| |||||
Sbjct: 78 gctaataacggattaattaggctcaaaagattcgtctcgcggtttcc 124
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 25 gagacgaatcttttgagactaatta 49
||||||||||||||||| |||||||
Sbjct: 14 gagacgaatcttttgagcctaatta 38
>51304_osa-miRf12089-akr:pmrd
Length = 120
Score = 107 bits (54), Expect = 2e-24
Identities = 96/110 (87%)
Strand = Plus / Plus
Query: 26 agacgaatcttttgagactaattaagccatcattagcacatgtgggttacggtagtactt 85
|||||||||||||||| |||||||| | ||||||||||||||||||| | ||| ||||
Sbjct: 11 agacgaatcttttgagcctaattaattcgtcattagcacatgtgggttgctatagcactt 70
Query: 86 atggctaatcacggactaattaggcttcaaagattcgtctcgcgatttcc 135
||||| ||||| || |||||||| || ||||||||||||||||||||||
Sbjct: 71 atggcaaatcatgggctaattagactcaaaagattcgtctcgcgatttcc 120
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 23 gcgagacgaatcttttgagactaatta 49
||||||||||||||||||| |||||||
Sbjct: 113 gcgagacgaatcttttgagtctaatta 87
>51249_osa-miRf12034-akr:pmrd
Length = 121
Score = 103 bits (52), Expect = 4e-23
Identities = 100/116 (86%)
Strand = Plus / Minus
Query: 18 aaactgcgagacgaatcttttgagactaattaagccatcattagcacatgtgggttacgg 77
|||| |||||| |||||| ||||| |||||||| || |||||||||||| ||||||| |
Sbjct: 119 aaaccgcgagatgaatctcttgagcctaattaatccgtcattagcacatacgggttactg 60
Query: 78 tagtacttatggctaatcacggactaattaggcttcaaagattcgtctcgcgattt 133
||| |||||| ||||||| |||||||||||||| |||||||||||| |||||||
Sbjct: 59 tagcacttataactaatcatggactaattaggctcaaaagattcgtcttgcgattt 4
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 26 agacgaatcttttgagactaatta 49
|||||||||||||||| |||||||
Sbjct: 12 agacgaatcttttgagcctaatta 35
>50516_osa-miRf11301-akr:pmrd
Length = 139
Score = 89.7 bits (45), Expect = 5e-19
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 63 acatgtgggttacggtagtacttatggctaatcacggactaattaggcttcaaagattcg 122
||||||||||||| |||| |||||||| |||||| ||||||||||||| |||||||||
Sbjct: 4 acatgtgggttactgtagcacttatggttaatcatagactaattaggctcaaaagattcg 63
Query: 123 tctcgcgatttcc 135
|||||||||||||
Sbjct: 64 tctcgcgatttcc 76
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 23 gcgagacgaatcttttgagactaatta 49
||||||||||||||||||| |||||||
Sbjct: 69 gcgagacgaatcttttgagcctaatta 43
>50155_osa-miRf10940-akr:pmrd
Length = 96
Score = 56.0 bits (28), Expect = 8e-09
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 64 catgtgggttacggtagtacttatggctaatcacggactaattaggcttcaaagattcgt 123
|||||||||| | ||| ||||||||||||||| ||||||||||| || ||||||| ||
Sbjct: 66 catgtgggttgctatagcacttatggctaatcatggactaattagactcaaaagatttgt 7
Query: 124 ctcg 127
||||
Sbjct: 6 ctcg 3
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 52.0 bits (26), Expect = 1e-07
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 11 cgcctgaaaactgcgagacgaatcttttgagactaattaagccatcattagcacatgt 68
|||||| |||| ||||||||||| | || || |||||||| |||||||||||| ||||
Sbjct: 136 cgcctgtaaaccgcgagacgaatttattaagcctaattaatccatcattagcaaatgt 79
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 103 aattaggcttcaaagattcgtctcgcgatttcct 136
|||||||| | |||||||||||||||||||||||
Sbjct: 44 aattaggcctaaaagattcgtctcgcgatttcct 11
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 89 gctaatcacggactaattaggcttcaaagattcgtctcgcgatttcct 136
|||||| ||||| ||||||||||||| | |||| ||| ||||||||||
Sbjct: 84 gctaatgacggattaattaggcttcataaattcatcttgcgatttcct 131
>49015_osa-miR445h:pmrd
Length = 277
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 23 gcgagacgaatcttttgagactaatta 49
||||||||||||||||||| |||||||
Sbjct: 182 gcgagacgaatcttttgagtctaatta 156
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 21 ctgcgagacgaatcttttgagactaattaagccatcatta 60
||||||||||||| |||| || |||||||| |||| ||||
Sbjct: 93 ctgcgagacgaattttttaagcctaattaatccataatta 132
>49013_osa-miR445f:pmrd
Length = 305
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 23 gcgagacgaatcttttgagactaatta 49
||||||||||||||||||| |||||||
Sbjct: 197 gcgagacgaatcttttgagtctaatta 171
>49012_osa-miR445e:pmrd
Length = 265
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 23 gcgagacgaatcttttgagactaatta 49
||||||||||||||||||| |||||||
Sbjct: 176 gcgagacgaatcttttgagtctaatta 150
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 21 ctgcgagacgaatcttttgagactaattaagccatcatta 60
||||||||||||| |||| || |||||||| |||| ||||
Sbjct: 87 ctgcgagacgaattttttaagcctaattaatccataatta 126
>49009_osa-miR445b:pmrd
Length = 264
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 23 gcgagacgaatcttttgagactaatta 49
||||||||||||||||||| |||||||
Sbjct: 175 gcgagacgaatcttttgagtctaatta 149
>49008_osa-miR445a:pmrd
Length = 268
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 23 gcgagacgaatcttttgagactaatta 49
||||||||||||||||||| |||||||
Sbjct: 186 gcgagacgaatcttttgagtctaatta 160
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 21 ctgcgagacgaatcttttgagactaattaagccatcatta 60
||||||||||||| |||| || |||||||| |||| ||||
Sbjct: 80 ctgcgagacgaattttttaagcctaattaatccataatta 119
>49004_osa-miR442:pmrd
Length = 233
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 103 aattaggcttcaaagattcgtctcgcgattt 133
|||||||||| ||||||||||||||| ||||
Sbjct: 90 aattaggcttaaaagattcgtctcgcaattt 60
Score = 46.1 bits (23), Expect = 7e-06
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 18 aaactgcgagacgaatcttttgagactaattaagccatcattagcacatgt 68
|||||||||||||||| | || || |||||||| || ||||||||| ||||
Sbjct: 174 aaactgcgagacgaatttattaagcctaattaatccgtcattagcaaatgt 124
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 89 gctaatcacggactaattaggcttcaaagattcgtctcgc 128
|||||| ||||| ||||||||||| | | |||||||||||
Sbjct: 130 gctaatgacggattaattaggcttaataaattcgtctcgc 169
>49010_osa-miR445c:pmrd
Length = 260
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 102 taattaggcttcaaagattcgtctcg 127
||||||||||| ||||||||||||||
Sbjct: 148 taattaggcttaaaagattcgtctcg 173
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 21 ctgcgagacgaatcttttgagactaattaagccatcatta 60
||||||||||||| |||| || |||||||| |||| ||||
Sbjct: 85 ctgcgagacgaattttttaagcctaattaatccataatta 124
>49014_osa-miR445g:pmrd
Length = 275
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 21 ctgcgagacgaatcttttgagactaattaagccatcatta 60
||||||||||||| |||| || |||||||| |||| ||||
Sbjct: 92 ctgcgagacgaattttttaagcctaattaatccataatta 131
