miRNEST 2.0, an integrative microRNA resource :: BLAST
>49004_osa-miR442:pmrd
Length = 233
Score = 155 bits (78), Expect = 1e-38
Identities = 112/122 (91%), Gaps = 1/122 (0%)
Strand = Plus / Plus
Query: 15 tgtaaattgcgagacgaatcttttgagcctaata-cgccatgatttgacaatgtggtgct 73
|||||||||||||||||||||||| |||||||| | ||||||| |||||||||||||||
Sbjct: 57 tgtaaattgcgagacgaatcttttaagcctaattgctccatgatctgacaatgtggtgct 116
Query: 74 acagtaaatatttgttaatggcggattaattagccttaataaattcgtctcgcggtttac 133
|||||||| ||||| ||||| |||||||||||| ||||||||||||||||||| ||||||
Sbjct: 117 acagtaaacatttgctaatgacggattaattaggcttaataaattcgtctcgcagtttac 176
Query: 134 ag 135
||
Sbjct: 177 ag 178
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 143 bits (72), Expect = 4e-35
Identities = 115/128 (89%), Gaps = 1/128 (0%)
Strand = Plus / Plus
Query: 10 ttgcatgtaaattgcgagacgaatcttttgagcctaata-cgccatgatttgacaatgtg 68
|||| |||||||||||||||| ||||||| |||||||| | |||| |||||||||||||
Sbjct: 7 ttgcgtgtaaattgcgagacggatcttttaagcctaattgcaccataatttgacaatgtg 66
Query: 69 gtgctacagtaaatatttgttaatggcggattaattagccttaataaattcgtctcgcgg 128
|||||| |||||| ||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct: 67 gtgctaaagtaaacatttgctaatgatggattaattaggcttaataaattcgtctcgcgg 126
Query: 129 tttacagg 136
||||||||
Sbjct: 127 tttacagg 134
>49008_osa-miR445a:pmrd
Length = 268
Score = 97.6 bits (49), Expect = 2e-21
Identities = 92/105 (87%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 23 gcgagacgaatcttttgagcctaat-acgccatgatttgacaatgtggtgctacagtaaa 81
||||||||||||||||||| ||||| || |||||||||||||||||| ||||||||||||
Sbjct: 186 gcgagacgaatcttttgagtctaattacaccatgatttgacaatgtgatgctacagtaaa 127
Query: 82 tatttgttaatggcggattaattagccttaataaattcgtctcgc 126
||| |||| ||||||||||| ||||| |||||||||||||
Sbjct: 126 cttttcataattatggattaattaggcttaaaaaattcgtctcgc 82
>50516_osa-miRf11301-akr:pmrd
Length = 139
Score = 77.8 bits (39), Expect = 2e-15
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 1 ttgcacagtttgcatgtaaattgcgagacgaatcttttgagcctaat 47
|||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 91 ttgcacagtttgcatggaaatcgcgagacgaatcttttgagcctaat 45
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 77.8 bits (39), Expect = 2e-15
Identities = 88/103 (85%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 18 aaattgcgagacgaatcttttgagcctaata-cgccatgatttgacaatgtggtgctaca 76
|||| |||||||||||||||| ||||||| |||||| |||| ||||||| ||| ||||
Sbjct: 14 aaatcgcgagacgaatcttttaggcctaattgcgccataatttaacaatgttgtggtaca 73
Query: 77 gtaaatatttgttaatggcggattaattagccttaataaattc 119
|||| ||||| ||||| |||||||||||| ||| ||||||||
Sbjct: 74 ataaacatttgctaatgacggattaattaggcttcataaattc 116
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 12 gcatgtaaattgcgagacgaatcttttgagcctaat 47
|||||||||| ||||||| |||||||||||||||||
Sbjct: 128 gcatgtaaatcgcgagacaaatcttttgagcctaat 93
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 23 gcgagacgaatcttttgagcctaat 47
|||||||||||||||||||||||||
Sbjct: 12 gcgagacgaatcttttgagcctaat 36
Score = 46.1 bits (23), Expect = 7e-06
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 86 tgttaatggcggattaattagccttaataaattcgtctcgcggtttacagg 136
|||||||| ||| |||||||| || || | |||||||||||||||| ||||
Sbjct: 52 tgttaatgacggcttaattaggctcaaaagattcgtctcgcggtttccagg 2
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 23 gcgagacgaatcttttgagcctaat 47
|||||||||||||||||||||||||
Sbjct: 8 gcgagacgaatcttttgagcctaat 32
Score = 46.1 bits (23), Expect = 7e-06
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 89 taatggcggattaattagccttaataaattcgtctcgcggttt 131
||||| |||||||||||| || || | ||||||||||||||||
Sbjct: 45 taatgacggattaattaggctcaaaagattcgtctcgcggttt 3
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 18 aaattgcgagacgaatcttttgagcctaat 47
|||| |||||||||||||||| ||||||||
Sbjct: 121 aaatcgcgagacgaatcttttaagcctaat 92
>49733_osa-miRf10518-akr:pmrd
Length = 122
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 23 gcgagacgaatcttttgagcctaat 47
|||||||||||||||||||||||||
Sbjct: 9 gcgagacgaatcttttgagcctaat 33
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 24 cgagacgaatcttttgagcctaat 47
||||||||||||||||||||||||
Sbjct: 113 cgagacgaatcttttgagcctaat 90
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 23 gcgagacgaatcttttgagcctaat 47
|||||||||||||||||||||||||
Sbjct: 117 gcgagacgaatcttttgagcctaat 93
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 25 gagacgaatcttttgagcctaat 47
|||||||||||||||||||||||
Sbjct: 14 gagacgaatcttttgagcctaat 36
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 95 cggattaattagccttaataaattcgtctcgcggtttacagg 136
|||||||||||| || || | |||||||||||||||| ||||
Sbjct: 86 cggattaattaggctcaaaagattcgtctcgcggtttccagg 127
>49015_osa-miR445h:pmrd
Length = 277
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 96 ggattaattagccttaataaattcgtctcgc 126
||||||||||| ||||| |||||||||||||
Sbjct: 125 ggattaattaggcttaaaaaattcgtctcgc 95
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 23 gcgagacgaatcttttgagcctaat 47
||||||||||||||||||| |||||
Sbjct: 182 gcgagacgaatcttttgagtctaat 158
>49014_osa-miR445g:pmrd
Length = 275
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 96 ggattaattagccttaataaattcgtctcgc 126
||||||||||| ||||| |||||||||||||
Sbjct: 124 ggattaattaggcttaaaaaattcgtctcgc 94
>49012_osa-miR445e:pmrd
Length = 265
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 96 ggattaattagccttaataaattcgtctcgc 126
||||||||||| ||||| |||||||||||||
Sbjct: 119 ggattaattaggcttaaaaaattcgtctcgc 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 23 gcgagacgaatcttttgagcctaat 47
||||||||||||||||||| |||||
Sbjct: 176 gcgagacgaatcttttgagtctaat 152
>49010_osa-miR445c:pmrd
Length = 260
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 96 ggattaattagccttaataaattcgtctcgc 126
||||||||||| ||||| |||||||||||||
Sbjct: 117 ggattaattaggcttaaaaaattcgtctcgc 87
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 24 cgagacgaatcttttgagcctaat 47
||||||||||||||| ||||||||
Sbjct: 173 cgagacgaatcttttaagcctaat 150
>51304_osa-miRf12089-akr:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 agacgaatcttttgagcctaat 47
||||||||||||||||||||||
Sbjct: 11 agacgaatcttttgagcctaat 32
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 18 aaattgcgagacgaatcttttgagcctaat 47
|||| ||||||||||||||||||| |||||
Sbjct: 118 aaatcgcgagacgaatcttttgagtctaat 89
>51249_osa-miRf12034-akr:pmrd
Length = 121
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 agacgaatcttttgagcctaat 47
||||||||||||||||||||||
Sbjct: 12 agacgaatcttttgagcctaat 33
>49652_osa-miRf10437-akr:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 18 aaattgcgagacgaatcttttgagcctaat 47
|||| ||||||| |||||||||||||||||
Sbjct: 3 aaatcgcgagacaaatcttttgagcctaat 32
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 23 gcgagacgaatcttttgagcctaat 47
|||||||||||||||||||| ||||
Sbjct: 113 gcgagacgaatcttttgagcataat 89
>49013_osa-miR445f:pmrd
Length = 305
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 23 gcgagacgaatcttttgagcctaat 47
||||||||||||||||||| |||||
Sbjct: 197 gcgagacgaatcttttgagtctaat 173
>49009_osa-miR445b:pmrd
Length = 264
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 23 gcgagacgaatcttttgagcctaat 47
||||||||||||||||||| |||||
Sbjct: 175 gcgagacgaatcttttgagtctaat 151
