miRNEST 2.0, an integrative microRNA resource :: BLAST
>49004_osa-miR442:pmrd
Length = 233
Score = 182 bits (92), Expect = 6e-47
Identities = 137/152 (90%)
Strand = Plus / Plus
Query: 33 tgtaaattgtgagacgaatcttttgagcctaattacgccatgattttacaatatgatgct 92
||||||||| |||||||||||||| ||||||||| | ||||||| | ||||| || ||||
Sbjct: 57 tgtaaattgcgagacgaatcttttaagcctaattgctccatgatctgacaatgtggtgct 116
Query: 93 acagtaaacatttgctaatgatggattaattaggcttaataaattcgtctcgcggtttac 152
||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 117 acagtaaacatttgctaatgacggattaattaggcttaataaattcgtctcgcagtttac 176
Query: 153 aggcataatctgtaatttgttttattattagt 184
|| | | ||||||||||||||| ||||||||
Sbjct: 177 agacggattctgtaatttgttttgttattagt 208
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 168 bits (85), Expect = 9e-43
Identities = 118/129 (91%)
Strand = Plus / Plus
Query: 28 ttgcatgtaaattgtgagacgaatcttttgagcctaattacgccatgattttacaatatg 87
|||| ||||||||| |||||| ||||||| ||||||||| | |||| |||| ||||| ||
Sbjct: 7 ttgcgtgtaaattgcgagacggatcttttaagcctaattgcaccataatttgacaatgtg 66
Query: 88 atgctacagtaaacatttgctaatgatggattaattaggcttaataaattcgtctcgcgg 147
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 gtgctaaagtaaacatttgctaatgatggattaattaggcttaataaattcgtctcgcgg 126
Query: 148 tttacaggc 156
|||||||||
Sbjct: 127 tttacaggc 135
>49008_osa-miR445a:pmrd
Length = 268
Score = 133 bits (67), Expect = 5e-32
Identities = 94/103 (91%)
Strand = Plus / Minus
Query: 43 gagacgaatcttttgagcctaattacgccatgattttacaatatgatgctacagtaaaca 102
||||||||||||||||| |||||||| ||||||||| ||||| ||||||||||||||||
Sbjct: 184 gagacgaatcttttgagtctaattacaccatgatttgacaatgtgatgctacagtaaact 125
Query: 103 tttgctaatgatggattaattaggcttaataaattcgtctcgc 145
||| |||| ||||||||||||||||||| |||||||||||||
Sbjct: 124 tttcataattatggattaattaggcttaaaaaattcgtctcgc 82
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 101 bits (51), Expect = 2e-22
Identities = 105/123 (85%)
Strand = Plus / Plus
Query: 43 gagacgaatcttttgagcctaattacgccatgattttacaatatgatgctacagtaaaca 102
|||||||||||||| |||||||| |||||| |||| ||||| | || |||| ||||||
Sbjct: 21 gagacgaatcttttaggcctaattgcgccataatttaacaatgttgtggtacaataaaca 80
Query: 103 tttgctaatgatggattaattaggcttaataaattcgtctcgcggtttacaggcataatc 162
||||||||||| ||||||||||||||| |||||||| ||| ||| ||| | |||| ||||
Sbjct: 81 tttgctaatgacggattaattaggcttcataaattcatcttgcgatttcctggcagaatc 140
Query: 163 tgt 165
|||
Sbjct: 141 tgt 143
>50516_osa-miRf11301-akr:pmrd
Length = 139
Score = 77.8 bits (39), Expect = 3e-15
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 17 aattgcacagtttgcatgtaaattgtgagacgaatcttttgagcctaatta 67
|||||||||||||||||| |||| | |||||||||||||||||||||||||
Sbjct: 93 aattgcacagtttgcatggaaatcgcgagacgaatcttttgagcctaatta 43
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 61.9 bits (31), Expect = 2e-10
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 100 acatttgctaatgatggattaattaggcttaataaattcgtctcgcggttt 150
|||| ||||||||| |||||||||||||| || | ||||||||||||||||
Sbjct: 53 acatgtgctaatgacggattaattaggctcaaaagattcgtctcgcggttt 3
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 gagacgaatcttttgagcctaatta 67
|||||||||||||||||||||||||
Sbjct: 10 gagacgaatcttttgagcctaatta 34
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 43 gagacgaatcttttgagcctaatta 67
|||||||||||||| ||||||||||
Sbjct: 114 gagacgaatcttttaagcctaatta 90
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 119 taattaggcttaataaattcgtctcgcg 146
||||||||||||| | ||||||||||||
Sbjct: 90 taattaggcttaaaagattcgtctcgcg 117
>49015_osa-miR445h:pmrd
Length = 277
Score = 61.9 bits (31), Expect = 2e-10
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 95 agtaaacatttgctaatgatggattaattaggcttaataaattcgtctcgc 145
||||||| ||| |||| ||||||||||||||||||| |||||||||||||
Sbjct: 145 agtaaacttttcataattatggattaattaggcttaaaaaattcgtctcgc 95
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 43 gagacgaatcttttgagcctaattacgccatgatt 77
||||||||||||||||| |||||||| ||||||||
Sbjct: 180 gagacgaatcttttgagtctaattacaccatgatt 146
>49014_osa-miR445g:pmrd
Length = 275
Score = 61.9 bits (31), Expect = 2e-10
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 95 agtaaacatttgctaatgatggattaattaggcttaataaattcgtctcgc 145
||||||| ||| |||| ||||||||||||||||||| |||||||||||||
Sbjct: 144 agtaaacttttcataattatggattaattaggcttaaaaaattcgtctcgc 94
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 44 agacgaatcttttgagcctaattacgccatgatt 77
|||||||||||||||| ||||||| ||||||||
Sbjct: 178 agacgaatcttttgagtttaattacaccatgatt 145
>49012_osa-miR445e:pmrd
Length = 265
Score = 61.9 bits (31), Expect = 2e-10
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 95 agtaaacatttgctaatgatggattaattaggcttaataaattcgtctcgc 145
||||||| ||| |||| ||||||||||||||||||| |||||||||||||
Sbjct: 139 agtaaacttttcataattatggattaattaggcttaaaaaattcgtctcgc 89
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 43 gagacgaatcttttgagcctaattacgccatgatt 77
||||||||||||||||| |||||||| ||||||||
Sbjct: 174 gagacgaatcttttgagtctaattacaccatgatt 140
>49010_osa-miR445c:pmrd
Length = 260
Score = 61.9 bits (31), Expect = 2e-10
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 95 agtaaacatttgctaatgatggattaattaggcttaataaattcgtctcgc 145
||||||| ||| |||| ||||||||||||||||||| |||||||||||||
Sbjct: 137 agtaaacttttcataattatggattaattaggcttaaaaaattcgtctcgc 87
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 43 gagacgaatcttttgagcctaattacgccatgatt 77
|||||||||||||| ||||||||||| ||||||||
Sbjct: 172 gagacgaatcttttaagcctaattacaccatgatt 138
>49011_osa-miR445d:pmrd
Length = 312
Score = 60.0 bits (30), Expect = 6e-10
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 86 tgatgctacagtaaacatttgctaatgatggattaattaggcttaa 131
|||||||||| ||||||| || |||| |||||||||||||||||||
Sbjct: 148 tgatgctacactaaacatgtgttaattatggattaattaggcttaa 193
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 58.0 bits (29), Expect = 2e-09
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 100 acatttgctaatgatggattaattaggcttaataaattcgtctcgcggtttacaggc 156
|||| ||||||| | |||||||||||||| || | |||||||||||||||| |||||
Sbjct: 72 acatgtgctaataacggattaattaggctcaaaagattcgtctcgcggtttccaggc 128
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 43 gagacgaatcttttgagcctaatta 67
|||||||||||||||||||||||||
Sbjct: 115 gagacgaatcttttgagcctaatta 91
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 56.0 bits (28), Expect = 1e-08
Identities = 107/130 (82%), Gaps = 5/130 (3%)
Strand = Plus / Minus
Query: 30 gcatgtaaattgtgagacgaatcttttgagcctaattacgccatgattttacaatatgat 89
|||||||||| | ||||| ||||||||||||||||||| ||||| || | ||| | |
Sbjct: 128 gcatgtaaatcgcgagacaaatcttttgagcctaattagttcatga-ttagccataag-t 71
Query: 90 gctacagtaa---acatttgctaatgatggattaattaggcttaataaattcgtctcgcg 146
|||||||||| |||| || |||||| || ||||||||||| || | ||||||||||||
Sbjct: 70 gctacagtaacctacatgtgttaatgacggcttaattaggctcaaaagattcgtctcgcg 11
Query: 147 gtttacaggc 156
|||| |||||
Sbjct: 10 gtttccaggc 1
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 gagacgaatcttttgagcctaatta 67
|||||||||||||||||||||||||
Sbjct: 14 gagacgaatcttttgagcctaatta 38
>49652_osa-miRf10437-akr:pmrd
Length = 120
Score = 56.0 bits (28), Expect = 1e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 107 ctaatgatggattaattaggcttaataaattcgtctcgcggttt 150
|||||||||||||||||| ||| || | ||||||||||||||||
Sbjct: 75 ctaatgatggattaattatgctcaaaagattcgtctcgcggttt 118
Score = 46.1 bits (23), Expect = 9e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 43 gagacgaatcttttgagcctaattacgccatgatt 77
||||| ||||||||||||||||||| ||||||||
Sbjct: 10 gagacaaatcttttgagcctaattagtccatgatt 44
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 43 gagacgaatcttttgagcctaatta 67
|||||||||||||||||| ||||||
Sbjct: 111 gagacgaatcttttgagcataatta 87
>49013_osa-miR445f:pmrd
Length = 305
Score = 54.0 bits (27), Expect = 4e-08
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 95 agtaaacatttgctaatgatggattaattaggcttaataaattcgtc 141
||||||| ||| |||| ||||||||||||||||||| |||||||||
Sbjct: 160 agtaaacttttcataattatggattaattaggcttaaaaaattcgtc 114
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 43 gagacgaatcttttgagcctaattacgccatgatt 77
||||||||||||||||| |||||||| ||||||||
Sbjct: 195 gagacgaatcttttgagtctaattacaccatgatt 161
>49009_osa-miR445b:pmrd
Length = 264
Score = 54.0 bits (27), Expect = 4e-08
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 95 agtaaacatttgctaatgatggattaattaggcttaataaattcgtctcgc 145
||||||| ||| |||| ||||||||||||||||||| || ||||||||||
Sbjct: 138 agtaaacttttcataattatggattaattaggcttaaaaagttcgtctcgc 88
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 43 gagacgaatcttttgagcctaattacgccatgatt 77
||||||||||||||||| |||||||| ||||||||
Sbjct: 173 gagacgaatcttttgagtctaattacaccatgatt 139
>51249_osa-miRf12034-akr:pmrd
Length = 121
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 44 agacgaatcttttgagcctaattacgccatgatt 77
|||||||||||||||||||||||| ||||||||
Sbjct: 12 agacgaatcttttgagcctaattagtccatgatt 45
Score = 52.0 bits (26), Expect = 2e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 105 tgctaatgatggattaattaggcttaataaattcgtctcgcggttt 150
||||||||| |||||||||||||| || | |||| |||||||||||
Sbjct: 74 tgctaatgacggattaattaggctcaagagattcatctcgcggttt 119
>49733_osa-miRf10518-akr:pmrd
Length = 122
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 gagacgaatcttttgagcctaatta 67
|||||||||||||||||||||||||
Sbjct: 11 gagacgaatcttttgagcctaatta 35
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 43 gagacgaatcttttgagcctaatta 67
|||||||||||||||||||||||||
Sbjct: 112 gagacgaatcttttgagcctaatta 88
>51304_osa-miRf12089-akr:pmrd
Length = 120
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 agacgaatcttttgagcctaatta 67
||||||||||||||||||||||||
Sbjct: 11 agacgaatcttttgagcctaatta 34
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 43 gagacgaatcttttgagcctaattacgccatgattt 78
||||||||||||||||| ||||||| |||||||||
Sbjct: 111 gagacgaatcttttgagtctaattagcccatgattt 76
>51205_osa-miRf11990-akr:pmrd
Length = 135
Score = 46.1 bits (23), Expect = 9e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 108 taatgatggattaattaggcttaataaattcgtctcgcg 146
|||| |||||||||||||||| |||| ||| ||||||||
Sbjct: 48 taatcatggattaattaggctcaatagatttgtctcgcg 10
>49016_osa-miR445i:pmrd
Length = 244
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 108 taatgatggattaattaggcttaa 131
|||| |||||||||||||||||||
Sbjct: 133 taattatggattaattaggcttaa 110
