miRNEST 2.0, an integrative microRNA resource :: BLAST
>49008_osa-miR445a:pmrd
Length = 268
Score = 172 bits (87), Expect = 8e-44
Identities = 187/219 (85%), Gaps = 1/219 (0%)
Strand = Plus / Minus
Query: 23 tattaaacgtagactattaataaaacccattc-ataatcttggactaattcgcgagacga 81
|||||||| || |||| | |||||||| |||| |||| ||||||||||||||||||||||
Sbjct: 237 tattaaacatacactaattataaaacctattctataaccttggactaattcgcgagacga 178
Query: 82 atctattgagcctaattaatctatgattagcctatgtgatactacaataaacattctcta 141
|||| ||||| ||||||| | |||||| | | ||||||| ||||| ||||| || ||
Sbjct: 177 atcttttgagtctaattacaccatgatttgacaatgtgatgctacagtaaacttttcata 118
Query: 142 attatggattaattaggcttaaaaaatttgtcttgcaaattagttttcgtttatgtaatt 201
|||||||||||||||||||||||||||| |||| ||| ||||| |||| |||||| ||||
Sbjct: 117 attatggattaattaggcttaaaaaattcgtctcgcagattagctttcatttatgaaatt 58
Query: 202 agttttgtaagtagtctatatttaatactctaaattagt 240
|||||| | | |||||||| |||||||||| ||||||||
Sbjct: 57 agtttttttattagtctatgtttaatactccaaattagt 19
Score = 44.1 bits (22), Expect = 5e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 203 gttttgtaagtagtctatatttaatactctaaattagt 240
||||| ||| |||| ||| |||||||||||||||||||
Sbjct: 212 gttttataattagtgtatgtttaatactctaaattagt 249
>49011_osa-miR445d:pmrd
Length = 312
Score = 170 bits (86), Expect = 3e-43
Identities = 198/232 (85%), Gaps = 5/232 (2%)
Strand = Plus / Plus
Query: 13 taattataaatattaaacgtagactattaataaaacccattc-ataatcttggactaatt 71
|||||| || |||||||| ||||||| | | ||| ||||||| |||| | |||| |||||
Sbjct: 42 taattaaaagtattaaacatagactaatgacaaaccccattccataaccctggattaatt 101
Query: 72 cgcgagacgaatctattgagcctaattaatctatgattagcctatgtgatactacaataa 131
||||||| |||||||||||| |||||||||| |||||||||||||||||| ||||| |||
Sbjct: 102 cgcgagatgaatctattgagtctaattaatcaatgattagcctatgtgatgctacactaa 161
Query: 132 acattctctaattatggattaattaggcttaaaaaatttgtcttgcaaattagttttcgt 191
|||| ||||||||||||||||||||||||||| ||||||| | |||||| | || |
Sbjct: 162 acatgtgttaattatggattaattaggcttaaaaattttgtctcacgaattagctctcat 221
Query: 192 ttatg---taattagttttgtaagtagtctatatttaatactctaaattagt 240
||||| | |||||||||||||||||| ||| ||||||| |||||||||||
Sbjct: 222 ttatgcaattattagttttgtaagtagtttatgtttaata-tctaaattagt 272
>49015_osa-miR445h:pmrd
Length = 277
Score = 113 bits (57), Expect = 7e-26
Identities = 90/101 (89%)
Strand = Plus / Minus
Query: 140 taattatggattaattaggcttaaaaaatttgtcttgcaaattagttttcgtttatgtaa 199
|||||||||||||||||||||||||||||| |||| ||| ||||| |||| |||||| ||
Sbjct: 132 taattatggattaattaggcttaaaaaattcgtctcgcagattagctttcatttatgaaa 73
Query: 200 ttagttttgtaagtagtctatatttaatactctaaattagt 240
|||||||| | | |||||||| |||||||||| ||||||||
Sbjct: 72 ttagtttttttattagtctatgtttaatactccaaattagt 32
Score = 44.1 bits (22), Expect = 5e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 203 gttttgtaagtagtctatatttaatactctaaattagt 240
||||| ||| |||| ||| |||||||||||||||||||
Sbjct: 208 gttttataattagtgtatgtttaatactctaaattagt 245
>49014_osa-miR445g:pmrd
Length = 275
Score = 111 bits (56), Expect = 3e-25
Identities = 89/100 (89%)
Strand = Plus / Minus
Query: 140 taattatggattaattaggcttaaaaaatttgtcttgcaaattagttttcgtttatgtaa 199
|||||||||||||||||||||||||||||| |||| ||| ||||| |||| |||||| ||
Sbjct: 131 taattatggattaattaggcttaaaaaattcgtctcgcagattagctttcatttatgaaa 72
Query: 200 ttagttttgtaagtagtctatatttaatactctaaattag 239
|||||||| | | |||||||| |||||||||| |||||||
Sbjct: 71 ttagtttttttattagtctatgtttaatactccaaattag 32
>49012_osa-miR445e:pmrd
Length = 265
Score = 111 bits (56), Expect = 3e-25
Identities = 89/100 (89%)
Strand = Plus / Minus
Query: 140 taattatggattaattaggcttaaaaaatttgtcttgcaaattagttttcgtttatgtaa 199
|||||||||||||||||||||||||||||| |||| ||| ||||| |||| |||||| ||
Sbjct: 126 taattatggattaattaggcttaaaaaattcgtctcgcagattagctttcatttatgaaa 67
Query: 200 ttagttttgtaagtagtctatatttaatactctaaattag 239
|||||||| | | |||||||| |||||||||| |||||||
Sbjct: 66 ttagtttttttattagtctatgtttaatactccaaattag 27
Score = 44.1 bits (22), Expect = 5e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 203 gttttgtaagtagtctatatttaatactctaaattagt 240
||||| ||| |||| ||| |||||||||||||||||||
Sbjct: 202 gttttataattagtgtatgtttaatactctaaattagt 239
>49010_osa-miR445c:pmrd
Length = 260
Score = 111 bits (56), Expect = 3e-25
Identities = 89/100 (89%)
Strand = Plus / Minus
Query: 140 taattatggattaattaggcttaaaaaatttgtcttgcaaattagttttcgtttatgtaa 199
|||||||||||||||||||||||||||||| |||| ||| ||||| |||| |||||| ||
Sbjct: 124 taattatggattaattaggcttaaaaaattcgtctcgcagattagctttcatttatgaaa 65
Query: 200 ttagttttgtaagtagtctatatttaatactctaaattag 239
|||||||| | | |||||||| |||||||||| |||||||
Sbjct: 64 ttagtttttttattagtctatgtttaatactccaaattag 25
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 203 gttttgtaagtagtctatatttaatactctaaattagt 240
||||| ||| |||| |||||||||||||||||||||||
Sbjct: 200 gttttataattagtgtatatttaatactctaaattagt 237
>49013_osa-miR445f:pmrd
Length = 305
Score = 103 bits (52), Expect = 6e-23
Identities = 88/100 (88%)
Strand = Plus / Minus
Query: 140 taattatggattaattaggcttaaaaaatttgtcttgcaaattagttttcgtttatgtaa 199
|||||||||||||||||||||||||||||| ||| ||| ||||| |||| |||||| ||
Sbjct: 147 taattatggattaattaggcttaaaaaattcgtcccgcagattagctttcatttatgaaa 88
Query: 200 ttagttttgtaagtagtctatatttaatactctaaattag 239
|||||||| | | |||||||| |||||||||| |||||||
Sbjct: 87 ttagtttttttattagtctatgtttaatactccaaattag 48
Score = 44.1 bits (22), Expect = 5e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 203 gttttgtaagtagtctatatttaatactctaaattagt 240
||||| ||| |||| ||| |||||||||||||||||||
Sbjct: 223 gttttataattagtgtatgtttaatactctaaattagt 260
>49009_osa-miR445b:pmrd
Length = 264
Score = 103 bits (52), Expect = 6e-23
Identities = 89/100 (89%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 140 taattatggattaattaggcttaaaaaatttgtcttgcaaattagttttcgtttatgtaa 199
||||||||||||||||||||||||||| || |||| ||| ||||| |||| |||||| ||
Sbjct: 125 taattatggattaattaggcttaaaaagttcgtctcgcagattagctttcatttatgaaa 66
Query: 200 ttagttttgtaagtagtctatatttaatactctaaattag 239
|||||||| | | |||||||| ||||||||||||||||||
Sbjct: 65 ttagtttt-ttattagtctatgtttaatactctaaattag 27
>49016_osa-miR445i:pmrd
Length = 244
Score = 95.6 bits (48), Expect = 2e-20
Identities = 88/100 (88%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 140 taattatggattaattaggcttaaaaaatttgtcttgcaaattagttttcgtttatgtaa 199
||||||||||||||||||||||||||| || ||| || ||||| |||| |||||| ||
Sbjct: 133 taattatggattaattaggcttaaaaa-ttcatctcacagattagctttcatttatgaaa 75
Query: 200 ttagttttgtaagtagtctatatttaatactctaaattag 239
|||||||| | | |||||||||||||||||||||||||||
Sbjct: 74 ttagtttttttattagtctatatttaatactctaaattag 35
Score = 63.9 bits (32), Expect = 5e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 23 tattaaacgtagactattaataaaacccattc-ataatcttggactaattcgcgagacga 81
|||||||| || |||| | |||||||| |||| |||| ||||||||||||||||||||||
Sbjct: 199 tattaaacatacactaattataaaacctattctataaccttggactaattcgcgagacga 140
Query: 82 atct 85
||||
Sbjct: 139 atct 136
>51205_osa-miRf11990-akr:pmrd
Length = 135
Score = 79.8 bits (40), Expect = 9e-16
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 63 ggactaattcgcgagacgaatctattgagcctaattaatctatgatta 110
||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 1 ggactaattcgcgagacaaatctattgagcctaattaatccatgatta 48
Score = 44.1 bits (22), Expect = 5e-05
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 140 taattatggattaattaggcttaaaaaatttgtcttgcaaattagt 185
|||| |||||||||||||||| || | |||||||| || |||||||
Sbjct: 48 taatcatggattaattaggctcaatagatttgtctcgcgaattagt 3
>50516_osa-miRf11301-akr:pmrd
Length = 139
Score = 63.9 bits (32), Expect = 5e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 71 tcgcgagacgaatctattgagcctaattaatctatgatta 110
||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 71 tcgcgagacgaatcttttgagcctaattagtctatgatta 32
>49004_osa-miR442:pmrd
Length = 233
Score = 60.0 bits (30), Expect = 9e-10
Identities = 84/102 (82%)
Strand = Plus / Plus
Query: 73 gcgagacgaatctattgagcctaattaatctatgattagcctatgtgatactacaataaa 132
||||||||||||| || ||||||||| || ||||| | | ||||| | ||||| ||||
Sbjct: 65 gcgagacgaatcttttaagcctaattgctccatgatctgacaatgtggtgctacagtaaa 124
Query: 133 cattctctaattatggattaattaggcttaaaaaatttgtct 174
|||| ||||| | ||||||||||||||||| ||||| ||||
Sbjct: 125 catttgctaatgacggattaattaggcttaataaattcgtct 166
Score = 44.1 bits (22), Expect = 5e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 73 gcgagacgaatctattgagcctaattaatc 102
||||||||||| |||| |||||||||||||
Sbjct: 169 gcgagacgaatttattaagcctaattaatc 140
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 54.0 bits (27), Expect = 5e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 72 cgcgagacgaatctattgagcctaattaatc 102
|||||||||||||| ||||||||||||||||
Sbjct: 7 cgcgagacgaatcttttgagcctaattaatc 37
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 71 tcgcgagacgaatctattgagcctaatta 99
||||||||||||||| || ||||||||||
Sbjct: 118 tcgcgagacgaatcttttaagcctaatta 90
>49652_osa-miRf10437-akr:pmrd
Length = 120
Score = 54.0 bits (27), Expect = 5e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 71 tcgcgagacgaatctattgagcctaattaatctatgattagcc 113
||||||||| ||||| ||||||||||||| || ||||||||||
Sbjct: 6 tcgcgagacaaatcttttgagcctaattagtccatgattagcc 48
Score = 48.1 bits (24), Expect = 3e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 72 cgcgagacgaatctattgagcctaattaatctatgattag 111
|||||||||||||| |||||| ||||||||| || |||||
Sbjct: 114 cgcgagacgaatcttttgagcataattaatccatcattag 75
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 54.0 bits (27), Expect = 5e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 72 cgcgagacgaatctattgagcctaattaatc 102
|||||||||||||| ||||||||||||||||
Sbjct: 118 cgcgagacgaatcttttgagcctaattaatc 88
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 75 gagacgaatctattgagcctaattaatctatgatta 110
||||||||||| ||||||||||||| | ||||||||
Sbjct: 14 gagacgaatcttttgagcctaattagtatatgatta 49
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 52.0 bits (26), Expect = 2e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 129 taaacattctctaattatggattaattaggcttaaaaaatttgtct 174
|||||||| ||||| ||||||||||||||||||| ||||| ||||
Sbjct: 76 taaacatttgctaatgatggattaattaggcttaataaattcgtct 121
Score = 50.1 bits (25), Expect = 8e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 72 cgcgagacgaatctattgagcctaattaatctatgattagc 112
|||||||||||| |||| ||||||||||||| || ||||||
Sbjct: 125 cgcgagacgaatttattaagcctaattaatccatcattagc 85
>51249_osa-miRf12034-akr:pmrd
Length = 121
Score = 50.1 bits (25), Expect = 8e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 71 tcgcgagacgaatctattgagcctaattaatctatgattag 111
|||| |||||||||| ||||||||||||| || ||||||||
Sbjct: 7 tcgcaagacgaatcttttgagcctaattagtccatgattag 47
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 72 cgcgagacgaatctattgagcctaattaatc 102
||||||| |||||| ||||||||||||||||
Sbjct: 115 cgcgagatgaatctcttgagcctaattaatc 85
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 50.1 bits (25), Expect = 8e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 72 cgcgagacgaatctattgagcctaattaa 100
|||||||||||||| ||||||||||||||
Sbjct: 11 cgcgagacgaatcttttgagcctaattaa 39
Score = 46.1 bits (23), Expect = 1e-05
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 71 tcgcgagacgaatctattgagcctaattaatctatgattagcc 113
||||||||| ||||| ||||||||||||| | ||||||||||
Sbjct: 119 tcgcgagacaaatcttttgagcctaattagttcatgattagcc 77
>49733_osa-miRf10518-akr:pmrd
Length = 122
Score = 50.1 bits (25), Expect = 8e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 72 cgcgagacgaatctattgagcctaattaa 100
|||||||||||||| ||||||||||||||
Sbjct: 8 cgcgagacgaatcttttgagcctaattaa 36
Score = 50.1 bits (25), Expect = 8e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 74 cgagacgaatctattgagcctaattaatctatgatta 110
|||||||||||| ||||||||||||| ||| ||||||
Sbjct: 113 cgagacgaatcttttgagcctaattagtctgtgatta 77
>51304_osa-miRf12089-akr:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 76 agacgaatctattgagcctaattaat 101
|||||||||| |||||||||||||||
Sbjct: 11 agacgaatcttttgagcctaattaat 36
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 71 tcgcgagacgaatctattgagcctaatta 99
||||||||||||||| ||||| |||||||
Sbjct: 115 tcgcgagacgaatcttttgagtctaatta 87
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 44.1 bits (22), Expect = 5e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 124 tacaataaacattctctaattatggattaattaggctt 161
||||||||||||| ||||| | |||||||||||||||
Sbjct: 70 tacaataaacatttgctaatgacggattaattaggctt 107
