miRNEST 2.0, an integrative microRNA resource :: BLAST
>48493_ghr-miR162a:pmrd
Length = 148
Score = 115 bits (58), Expect = 1e-26
Identities = 90/98 (91%), Gaps = 2/98 (2%)
Strand = Plus / Plus
Query: 29 cactggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataacacaa 88
||||||||||||||||||||||||| ||| || ||||||||||||| || ||||||||
Sbjct: 22 cactggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaa-taacacaa 80
Query: 89 aatacatgaatcgatcgataaacctctgcatccagcgc 126
| ||||||||||||||||||||||||||||||||||||
Sbjct: 81 a-tacatgaatcgatcgataaacctctgcatccagcgc 117
>54387_rco-miR162:pmrd
Length = 96
Score = 89.7 bits (45), Expect = 6e-19
Identities = 86/97 (88%), Gaps = 2/97 (2%)
Strand = Plus / Plus
Query: 29 cactggaggcagcggttcatcgatcactttgtgcaa-attttgttgtgaaaaataacaca 87
||||||||||||||||||||||||| ||| || || |||||||||||||| | || | |
Sbjct: 1 cactggaggcagcggttcatcgatctcttcctggaagattttgttgtgaaacaaaa-ata 59
Query: 88 aaatacatgaatcgatcgataaacctctgcatccagc 124
||| ||||||||||||||||||||||||||||||||
Sbjct: 60 aaacgcatgaatcgatcgataaacctctgcatccagc 96
>48423_cpa-miR162a:pmrd
Length = 109
Score = 87.7 bits (44), Expect = 2e-18
Identities = 88/101 (87%), Gaps = 5/101 (4%)
Strand = Plus / Plus
Query: 25 aagtcactggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataac 84
||||||||||||||||||||||||||||| ||| || ||||| || ||||||||| ||
Sbjct: 7 aagtcactggaggcagcggttcatcgatctcttcctgggaatttggt-gtgaaaaatcac 65
Query: 85 acaaaatacatgaatcgatcgataaacctctgcatccagcg 125
| || |||||||||||||||||||||||||||||||||
Sbjct: 66 agaa----catgaatcgatcgataaacctctgcatccagcg 102
>48545_gma-miR162a:pmrd
Length = 102
Score = 79.8 bits (40), Expect = 5e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 93 catgaatcgatcgataaacctctgcatccagcgctcactc 132
||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 catgaatcgatcgataaacctctgcatccagcgctcactc 102
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 22 gtgaagtcactggaggcagcggttcatcgatc 53
|||||||||||||| |||||||||||||||||
Sbjct: 1 gtgaagtcactggatgcagcggttcatcgatc 32
>52400_ptc-miRf10578-akr:pmrd
Length = 103
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 92 acatgaatcgatcgataaacctctgcatccagcgct 127
||||||| ||||||||||||||||||||||||||||
Sbjct: 39 acatgaaccgatcgataaacctctgcatccagcgct 4
>52399_ptc-miRf10577-akr:pmrd
Length = 103
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 92 acatgaatcgatcgataaacctctgcatccagcgct 127
||||||| ||||||||||||||||||||||||||||
Sbjct: 39 acatgaaccgatcgataaacctctgcatccagcgct 4
>51616_ptc-miR162a:pmrd
Length = 107
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 92 acatgaatcgatcgataaacctctgcatccagcgct 127
||||||| ||||||||||||||||||||||||||||
Sbjct: 67 acatgaaccgatcgataaacctctgcatccagcgct 102
>47354_ath-miRf10254-akr:pmrd
Length = 115
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 96 gaatcgatcgataaacctctgcatccagcgct 127
||||||||||||||||||||||||||||||||
Sbjct: 42 gaatcgatcgataaacctctgcatccagcgct 11
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 19 agagtgaagtcactggaggcagcggttcatcgatca 54
||||||||||| ||||||||||||||||||||||||
Sbjct: 114 agagtgaagtcgctggaggcagcggttcatcgatca 79
>46938_ath-miR162b:pmrd
Length = 111
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 96 gaatcgatcgataaacctctgcatccagcgct 127
||||||||||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccagcgct 103
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 20 gagtgaagtcactggaggcagcggttcatcgatca 54
|||||||||| ||||||||||||||||||||||||
Sbjct: 1 gagtgaagtcgctggaggcagcggttcatcgatca 35
>48682_llu-miR162:pmrd
Length = 80
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 93 catgaatcgatcgataaacctctgcatccag 123
|||||||||||||||||||||||||||||||
Sbjct: 50 catgaatcgatcgataaacctctgcatccag 80
>54784_vvi-miR162:pmrd
Length = 103
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 96 gaatcgatcgataaacctctgcatccagcgctcactcc 133
|||||| ||||||||||||||||||||||| |||||||
Sbjct: 66 gaatcggtcgataaacctctgcatccagcgttcactcc 103
>48546_gma-miR162m:pmrd
Length = 367
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 103 tcgataaacctctgcatccagcgctcact 131
|||||||||||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccagcgctcact 29
>46937_ath-miR162a:pmrd
Length = 140
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 93 catgaatcgatcgataaacctctgcatccagcg 125
||||||| |||||||||||||||||||||||||
Sbjct: 79 catgaatagatcgataaacctctgcatccagcg 111
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 26 agtcactggaggcagcggttcatcgatc 53
|||| |||||||||||||||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatc 47
>48834_osa-miR162a:pmrd
Length = 171
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 96 gaatcgatcgataaacctctgcatccag 123
||||||||||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>48707_mtr-miR162d:pmrd
Length = 87
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 92 acatgaatcgatcgataaacctctgcatccag 123
|||||||||| |||||||||||||||||||||
Sbjct: 56 acatgaatcggtcgataaacctctgcatccag 87
>48685_lsa-miR162:pmrd
Length = 89
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 103 tcgataaacctctgcatccagcgctcac 130
||||||||||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccagcgctcac 28
>48706_mtr-miR162c:pmrd
Length = 86
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 92 acatgaatcgatcgataaacctctgcatcca 122
|||||||||| ||||||||||||||||||||
Sbjct: 31 acatgaatcggtcgataaacctctgcatcca 1
>48705_mtr-miR162b:pmrd
Length = 85
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 92 acatgaatcgatcgataaacctctgcatcca 122
|||||||||| ||||||||||||||||||||
Sbjct: 55 acatgaatcggtcgataaacctctgcatcca 85
>52498_ptc-miRf10676-akr:pmrd
Length = 101
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 24 gaagtcactggaggcagcggttcatcgatc 53
|||| |||||||||||||||||||||||||
Sbjct: 101 gaagacactggaggcagcggttcatcgatc 72
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 100 cgatcgataaacctctgcatccag 123
||||||||||||||||||||||||
Sbjct: 30 cgatcgataaacctctgcatccag 7
>52497_ptc-miRf10675-akr:pmrd
Length = 105
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 24 gaagtcactggaggcagcggttcatcgatc 53
|||| |||||||||||||||||||||||||
Sbjct: 103 gaagacactggaggcagcggttcatcgatc 74
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 100 cgatcgataaacctctgcatccag 123
||||||||||||||||||||||||
Sbjct: 32 cgatcgataaacctctgcatccag 9
>52244_ptc-miRf10422-akr:pmrd
Length = 105
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 24 gaagtcactggaggcagcggttcatcgatc 53
|||| |||||||||||||||||||||||||
Sbjct: 103 gaagacactggaggcagcggttcatcgatc 74
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 100 cgatcgataaacctctgcatccag 123
||||||||||||||||||||||||
Sbjct: 32 cgatcgataaacctctgcatccag 9
>52243_ptc-miRf10421-akr:pmrd
Length = 101
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 24 gaagtcactggaggcagcggttcatcgatc 53
|||| |||||||||||||||||||||||||
Sbjct: 101 gaagacactggaggcagcggttcatcgatc 72
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 100 cgatcgataaacctctgcatccag 123
||||||||||||||||||||||||
Sbjct: 30 cgatcgataaacctctgcatccag 7
>51618_ptc-miR162c:pmrd
Length = 107
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 24 gaagtcactggaggcagcggttcatcgatc 53
|||| |||||||||||||||||||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatc 33
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 100 cgatcgataaacctctgcatccag 123
||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccag 98
>51617_ptc-miR162b:pmrd
Length = 107
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 24 gaagtcactggaggcagcggttcatcgatc 53
|||| |||||||||||||||||||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatc 33
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 100 cgatcgataaacctctgcatccag 123
||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccag 98
>54948_zma-miR162b:pmrd
Length = 130
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 96 gaatcgatcgataaacctctgcatccag 123
|||||| |||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>54542_sly-miR162:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 96 gaatcgatcgataaacctctgcatccag 123
|||||| |||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
>48836_osa-miR162m:pmrd
Length = 114
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 96 gaatcgatcgataaacctctgcatccag 123
|||||||||||||| |||||||||||||
Sbjct: 87 gaatcgatcgataagcctctgcatccag 114
>48835_osa-miR162b:pmrd
Length = 134
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 96 gaatcgatcgataaacctctgcatccag 123
|||||||||||||| |||||||||||||
Sbjct: 97 gaatcgatcgataagcctctgcatccag 124
>48690_mdo-miR162:pmrd
Length = 88
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 93 catgaatcgatcgataaacctctgcatccag 123
||||||||| ||||||||||| |||||||||
Sbjct: 58 catgaatcggtcgataaacctttgcatccag 88
