miRNEST 2.0, an integrative microRNA resource :: BLAST
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 149 bits (75), Expect = 1e-36
Identities = 108/119 (90%)
Strand = Plus / Minus
Query: 47 aaatcgcgagacgaatattttgagcctaattagtccatgattagccataagtgctatagt 106
|||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 122 aaatcgcgagacaaatcttttgagcctaattagttcatgattagccataagtgctacagt 63
Query: 107 aacccacatgtgctaatgacagattaattaggcttaataaattcgtctcgcggtttcca 165
|||| ||||||| ||||||| | ||||||||||| || | |||||||||||||||||||
Sbjct: 62 aacctacatgtgttaatgacggcttaattaggctcaaaagattcgtctcgcggtttcca 4
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 44 tggaaatcgcgagacgaatattttgagcctaatta 78
|||||| |||||||||||| |||||||||||||||
Sbjct: 4 tggaaaccgcgagacgaatcttttgagcctaatta 38
>49652_osa-miRf10437-akr:pmrd
Length = 120
Score = 143 bits (72), Expect = 6e-35
Identities = 108/120 (90%)
Strand = Plus / Plus
Query: 45 ggaaatcgcgagacgaatattttgagcctaattagtccatgattagccataagtgctata 104
|||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 ggaaatcgcgagacaaatcttttgagcctaattagtccatgattagccataaatgctata 60
Query: 105 gtaacccacatgtgctaatgacagattaattaggcttaataaattcgtctcgcggtttcc 164
|||||||| || | ||||||| ||||||||| ||| || | ||||||||||||||||||
Sbjct: 61 gtaacccaaatatactaatgatggattaattatgctcaaaagattcgtctcgcggtttcc 120
Score = 52.0 bits (26), Expect = 2e-07
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 45 ggaaatcgcgagacgaatattttgagcctaattagtccatgattag 90
||||| |||||||||||| |||||||| |||||| ||||| |||||
Sbjct: 120 ggaaaccgcgagacgaatcttttgagcataattaatccatcattag 75
>51304_osa-miRf12089-akr:pmrd
Length = 120
Score = 139 bits (70), Expect = 9e-34
Identities = 100/110 (90%)
Strand = Plus / Minus
Query: 45 ggaaatcgcgagacgaatattttgagcctaattagtccatgattagccataagtgctata 104
|||||||||||||||||| ||||||| |||||||| |||||||| |||||||||||||||
Sbjct: 120 ggaaatcgcgagacgaatcttttgagtctaattagcccatgatttgccataagtgctata 61
Query: 105 gtaacccacatgtgctaatgacagattaattaggcttaataaattcgtct 154
| |||||||||||||||||||| |||||||||||| || | ||||||||
Sbjct: 60 gcaacccacatgtgctaatgacgaattaattaggctcaaaagattcgtct 11
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 45 ggaaatcgcgagacgaatattttgagcctaatta 78
||||||| | |||||||| |||||||||||||||
Sbjct: 1 ggaaatcacaagacgaatcttttgagcctaatta 34
>51249_osa-miRf12034-akr:pmrd
Length = 121
Score = 139 bits (70), Expect = 9e-34
Identities = 106/118 (89%)
Strand = Plus / Plus
Query: 47 aaatcgcgagacgaatattttgagcctaattagtccatgattagccataagtgctatagt 106
||||||| |||||||| ||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 4 aaatcgcaagacgaatcttttgagcctaattagtccatgattagttataagtgctacagt 63
Query: 107 aacccacatgtgctaatgacagattaattaggcttaataaattcgtctcgcggtttcc 164
||||| ||||||||||||| ||||||||||||| || | |||| |||||||||||||
Sbjct: 64 aacccgtatgtgctaatgacggattaattaggctcaagagattcatctcgcggtttcc 121
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 137 bits (69), Expect = 4e-33
Identities = 110/123 (89%), Gaps = 3/123 (2%)
Strand = Plus / Minus
Query: 45 ggaaatcgcgagacgaatattttgagcctaattagtcc---atgattagccataagtgct 101
|||||||||||||||||| |||| |||||||||||| | | |||||||||||||||||
Sbjct: 123 ggaaatcgcgagacgaatcttttaagcctaattagtactacacgattagccataagtgct 64
Query: 102 atagtaacccacatgtgctaatgacagattaattaggcttaataaattcgtctcgcggtt 161
| ||||| ||||||||||||||||| ||||||||||||| || | |||||||||||||||
Sbjct: 63 acagtaatccacatgtgctaatgacggattaattaggctcaaaagattcgtctcgcggtt 4
Query: 162 tcc 164
|||
Sbjct: 3 tcc 1
Score = 54.0 bits (27), Expect = 4e-08
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 45 ggaaatcgcgagacgaatattttgagcctaattagtccatgattagc 91
||||| |||||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 1 ggaaaccgcgagacgaatcttttgagcctaattaatccgtcattagc 47
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 131 taattaggcttaataaattcgtctcgcggtttcc 164
||||||||||||| | |||||||||||| |||||
Sbjct: 90 taattaggcttaaaagattcgtctcgcgatttcc 123
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 137 bits (69), Expect = 4e-33
Identities = 108/121 (89%)
Strand = Plus / Plus
Query: 45 ggaaatcgcgagacgaatattttgagcctaattagtccatgattagccataagtgctata 104
||||||| ||||||||| ||||||||||||||||| ||||||| |||||||||||| |
Sbjct: 5 ggaaatcatgagacgaatcttttgagcctaattagtatatgattaaccataagtgctaca 64
Query: 105 gtaacccacatgtgctaatgacagattaattaggcttaataaattcgtctcgcggtttcc 164
|||||||||||||||||| || ||||||||||||| || | ||||||||||||||||||
Sbjct: 65 ataacccacatgtgctaataacggattaattaggctcaaaagattcgtctcgcggtttcc 124
Query: 165 a 165
|
Sbjct: 125 a 125
Score = 56.0 bits (28), Expect = 1e-08
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 44 tggaaatcgcgagacgaatattttgagcctaattagtccatgattagc 91
|||||| |||||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 125 tggaaaccgcgagacgaatcttttgagcctaattaatccgttattagc 78
>50516_osa-miRf11301-akr:pmrd
Length = 139
Score = 133 bits (67), Expect = 6e-32
Identities = 85/91 (93%)
Strand = Plus / Minus
Query: 27 taattgcacattttgcttggaaatcgcgagacgaatattttgagcctaattagtccatga 86
|||||||||| ||||| ||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 94 taattgcacagtttgcatggaaatcgcgagacgaatcttttgagcctaattagtctatga 35
Query: 87 ttagccataagtgctatagtaacccacatgt 117
||| |||||||||||| ||||||||||||||
Sbjct: 34 ttaaccataagtgctacagtaacccacatgt 4
Score = 58.0 bits (29), Expect = 3e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 84 tgattagccataagtgctatagtaacccacatgtgct 120
|||||| ||||| ||||||||||||||||||||||||
Sbjct: 103 tgattaaccataggtgctatagtaacccacatgtgct 139
>49733_osa-miRf10518-akr:pmrd
Length = 122
Score = 127 bits (64), Expect = 4e-30
Identities = 100/112 (89%)
Strand = Plus / Minus
Query: 53 cgagacgaatattttgagcctaattagtccatgattagccataagtgctatagtaaccca 112
|||||||||| |||||||||||||||||| |||||| |||||| ||||| |||||||||
Sbjct: 113 cgagacgaatcttttgagcctaattagtctgtgattaaccataaatgctacagtaaccca 54
Query: 113 catgtgctaatgacagattaattaggcttaataaattcgtctcgcggtttcc 164
||||| |||||||| | ||||||||||| || | ||||||||||||||||||
Sbjct: 53 catgtactaatgacggcttaattaggctcaaaagattcgtctcgcggtttcc 2
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 45 ggaaatcgcgagacgaatattttgagcctaatta 78
||||| |||||||||||| |||||||||||||||
Sbjct: 2 ggaaaccgcgagacgaatcttttgagcctaatta 35
>50155_osa-miRf10940-akr:pmrd
Length = 96
Score = 95.6 bits (48), Expect = 1e-20
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 53 cgagacgaatattttgagcctaattagtccatgattagccataagtgctatagtaaccca 112
|||||| ||| ||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3 cgagacaaatcttttgagtctaattagtccatgattagccataagtgctatagcaaccca 62
Query: 113 catg 116
||||
Sbjct: 63 catg 66
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 77.8 bits (39), Expect = 3e-15
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 112 acatgtgctaatgacagattaattaggcttaataaattcgtctcgcggttt 162
|||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 79 acatttgctaatgatggattaattaggcttaataaattcgtctcgcggttt 129
Score = 42.1 bits (21), Expect = 2e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 51 cgcgagacgaatattttgagcctaattagtccatgattagc 91
|||||||||||| | || |||||||||| ||||| ||||||
Sbjct: 125 cgcgagacgaatttattaagcctaattaatccatcattagc 85
>49004_osa-miR442:pmrd
Length = 233
Score = 77.8 bits (39), Expect = 3e-15
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 112 acatgtgctaatgacagattaattaggcttaataaattcgtctcgcggttt 162
|||| |||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 124 acatttgctaatgacggattaattaggcttaataaattcgtctcgcagttt 174
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 58.0 bits (29), Expect = 3e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 112 acatgtgctaatgacagattaattaggcttaataaattcgtctcgcggtttcc 164
|||| |||||||||| |||||||||||||| |||||||| ||| ||| |||||
Sbjct: 78 acatttgctaatgacggattaattaggcttcataaattcatcttgcgatttcc 130
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 45 ggaaatcgcgagacgaatattttgagcctaatt 77
|||||||||||||||||| |||| ||||||||
Sbjct: 12 ggaaatcgcgagacgaatcttttaggcctaatt 44
>49015_osa-miR445h:pmrd
Length = 277
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 128 gattaattaggcttaataaattcgtctcgc 157
|||||||||||||||| |||||||||||||
Sbjct: 124 gattaattaggcttaaaaaattcgtctcgc 95
Score = 50.1 bits (25), Expect = 7e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 50 tcgcgagacgaatattttgagcctaattagtccatgattag 90
||||||||||||| ||||||| ||||||| ||||||||||
Sbjct: 184 tcgcgagacgaatcttttgagtctaattacaccatgattag 144
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 52 gcgagacgaatattttgagcctaattagtccatgatta 89
||||||||||| |||| |||||||||| ||||| ||||
Sbjct: 95 gcgagacgaattttttaagcctaattaatccataatta 132
>49014_osa-miR445g:pmrd
Length = 275
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 128 gattaattaggcttaataaattcgtctcgc 157
|||||||||||||||| |||||||||||||
Sbjct: 123 gattaattaggcttaaaaaattcgtctcgc 94
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 52 gcgagacgaatattttgagcctaattagtccatgatta 89
||||||||||| |||| |||||||||| ||||| ||||
Sbjct: 94 gcgagacgaattttttaagcctaattaatccataatta 131
>49012_osa-miR445e:pmrd
Length = 265
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 128 gattaattaggcttaataaattcgtctcgc 157
|||||||||||||||| |||||||||||||
Sbjct: 118 gattaattaggcttaaaaaattcgtctcgc 89
Score = 50.1 bits (25), Expect = 7e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 50 tcgcgagacgaatattttgagcctaattagtccatgattag 90
||||||||||||| ||||||| ||||||| ||||||||||
Sbjct: 178 tcgcgagacgaatcttttgagtctaattacaccatgattag 138
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 52 gcgagacgaatattttgagcctaattagtccatgatta 89
||||||||||| |||| |||||||||| ||||| ||||
Sbjct: 89 gcgagacgaattttttaagcctaattaatccataatta 126
>49010_osa-miR445c:pmrd
Length = 260
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 128 gattaattaggcttaataaattcgtctcgc 157
|||||||||||||||| |||||||||||||
Sbjct: 116 gattaattaggcttaaaaaattcgtctcgc 87
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 52 gcgagacgaatattttgagcctaattagtccatgatta 89
||||||||||| |||| |||||||||| ||||| ||||
Sbjct: 87 gcgagacgaattttttaagcctaattaatccataatta 124
>49008_osa-miR445a:pmrd
Length = 268
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 128 gattaattaggcttaataaattcgtctcgc 157
|||||||||||||||| |||||||||||||
Sbjct: 111 gattaattaggcttaaaaaattcgtctcgc 82
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 50 tcgcgagacgaatattttgagcctaattagtccatgatt 88
||||||||||||| ||||||| ||||||| ||||||||
Sbjct: 188 tcgcgagacgaatcttttgagtctaattacaccatgatt 150
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 52 gcgagacgaatattttgagcctaattagtccatgatta 89
||||||||||| |||| |||||||||| ||||| ||||
Sbjct: 82 gcgagacgaattttttaagcctaattaatccataatta 119
>49013_osa-miR445f:pmrd
Length = 305
Score = 50.1 bits (25), Expect = 7e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 50 tcgcgagacgaatattttgagcctaattagtccatgattag 90
||||||||||||| ||||||| ||||||| ||||||||||
Sbjct: 199 tcgcgagacgaatcttttgagtctaattacaccatgattag 159
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 128 gattaattaggcttaataaattcgtc 153
|||||||||||||||| |||||||||
Sbjct: 139 gattaattaggcttaaaaaattcgtc 114
>49009_osa-miR445b:pmrd
Length = 264
Score = 50.1 bits (25), Expect = 7e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 50 tcgcgagacgaatattttgagcctaattagtccatgattag 90
||||||||||||| ||||||| ||||||| ||||||||||
Sbjct: 177 tcgcgagacgaatcttttgagtctaattacaccatgattag 137
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 128 gattaattaggcttaataaattcgtctcgc 157
|||||||||||||||| || ||||||||||
Sbjct: 117 gattaattaggcttaaaaagttcgtctcgc 88
>51205_osa-miRf11990-akr:pmrd
Length = 135
Score = 48.1 bits (24), Expect = 3e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 50 tcgcgagacgaatattttgagcctaattagtccatgatta 89
||||||||| ||| | ||||||||||||| ||||||||||
Sbjct: 9 tcgcgagacaaatctattgagcctaattaatccatgatta 48
