miRNEST 2.0, an integrative microRNA resource :: BLAST
>48919_osa-miR393b:pmrd
Length = 132
Score = 246 bits (124), Expect = 4e-66
Identities = 130/132 (98%)
Strand = Plus / Plus
Query: 7 tcggcctgaggaaactagtggaggactccaaagggatcgcattgatctgggtagctatct 66
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 tcggcctgaggaaactagtggaggactccaaagggatcgcattgatctggctagctatct 60
Query: 67 cgatcgatcgcctcatcgatcgacgacgacgtgcgtgatcgatcagtggaatccctttgg 126
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 61 cgatcgatcgcctcatcgatcgacgacgacgtgcgtgatcgatcagtgcaatccctttgg 120
Query: 127 aattttcctctt 138
||||||||||||
Sbjct: 121 aattttcctctt 132
>48918_osa-miR393b:pmrd
Length = 132
Score = 246 bits (124), Expect = 4e-66
Identities = 130/132 (98%)
Strand = Plus / Plus
Query: 7 tcggcctgaggaaactagtggaggactccaaagggatcgcattgatctgggtagctatct 66
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 tcggcctgaggaaactagtggaggactccaaagggatcgcattgatctggctagctatct 60
Query: 67 cgatcgatcgcctcatcgatcgacgacgacgtgcgtgatcgatcagtggaatccctttgg 126
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 61 cgatcgatcgcctcatcgatcgacgacgacgtgcgtgatcgatcagtgcaatccctttgg 120
Query: 127 aattttcctctt 138
||||||||||||
Sbjct: 121 aattttcctctt 132
>55056_zma-miR393:pmrd
Length = 126
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 15 aggaaactagtggaggactccaaagggatcgcattgatct 54
||||| || |||||||||||||||||||||||||||||||
Sbjct: 3 aggaagctggtggaggactccaaagggatcgcattgatct 42
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 107 gatcagtggaatccctttggaattttcc 134
|||||||| |||||||||||||||||||
Sbjct: 87 gatcagtgcaatccctttggaattttcc 114
>55061_zma-miR393e:pmrd
Length = 89
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 31 actccaaagggatcgcattgatct 54
||||||||||||||||||||||||
Sbjct: 89 actccaaagggatcgcattgatct 66
>55060_zma-miR393d:pmrd
Length = 91
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 31 actccaaagggatcgcattgatct 54
||||||||||||||||||||||||
Sbjct: 91 actccaaagggatcgcattgatct 68
>55059_zma-miR393c:pmrd
Length = 89
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 31 actccaaagggatcgcattgatct 54
||||||||||||||||||||||||
Sbjct: 1 actccaaagggatcgcattgatct 24
>55058_zma-miR393b:pmrd
Length = 91
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 31 actccaaagggatcgcattgatct 54
||||||||||||||||||||||||
Sbjct: 1 actccaaagggatcgcattgatct 24
>53841_ptc-miRf12019-akr:pmrd
Length = 98
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 19 aactagtggaggactccaaagggatcgcattgatc 53
|||||| ||||| |||||||||||||||||||||
Sbjct: 3 aactagaggaggcatccaaagggatcgcattgatc 37
>51972_ptc-miRf10150-akr:pmrd
Length = 98
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 19 aactagtggaggactccaaagggatcgcattgatc 53
|||||| ||||| |||||||||||||||||||||
Sbjct: 96 aactagaggaggcatccaaagggatcgcattgatc 62
>51950_ptc-miRf10128-akr:pmrd
Length = 99
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 19 aactagtggaggactccaaagggatcgcattgatc 53
|||||| ||||| |||||||||||||||||||||
Sbjct: 3 aactagaggaggcatccaaagggatcgcattgatc 37
>55063_zma-miR393g:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 tccaaagggatcgcattgatct 54
||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatct 22
>53840_ptc-miRf12018-akr:pmrd
Length = 92
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 20 actagtggaggactccaaagggatcgcattgatc 53
||||| ||||| |||||||||||||||||||||
Sbjct: 1 actagaggaggcatccaaagggatcgcattgatc 34
>52949_ptc-miRf11127-akr:pmrd
Length = 93
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 20 actagtggaggactccaaagggatcgcattgatc 53
||||| ||||| |||||||||||||||||||||
Sbjct: 1 actagaggaggcatccaaagggatcgcattgatc 34
>52948_ptc-miRf11126-akr:pmrd
Length = 93
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 20 actagtggaggactccaaagggatcgcattgatc 53
||||| ||||| |||||||||||||||||||||
Sbjct: 1 actagaggaggcatccaaagggatcgcattgatc 34
>52374_ptc-miRf10552-akr:pmrd
Length = 92
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 20 actagtggaggactccaaagggatcgcattgatc 53
||||| ||||| |||||||||||||||||||||
Sbjct: 1 actagaggaggcatccaaagggatcgcattgatc 34
>51723_ptc-miR393d:pmrd
Length = 107
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 tccaaagggatcgcattgatct 54
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatct 32
>51722_ptc-miR393c:pmrd
Length = 107
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 tccaaagggatcgcattgatct 54
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatct 32
>48501_ghr-miR393:pmrd
Length = 119
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 tccaaagggatcgcattgatct 54
||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatct 22
>55062_zma-miR393f:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tccaaagggatcgcattgatc 53
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>55057_zma-miR393a:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tccaaagggatcgcattgatc 53
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>54850_vvi-miR393b:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tccaaagggatcgcattgatc 53
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>54849_vvi-miR393a:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tccaaagggatcgcattgatc 53
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>54470_sbi-miR393:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tccaaagggatcgcattgatc 53
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>51721_ptc-miR393b:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tccaaagggatcgcattgatc 53
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>51720_ptc-miR393a:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tccaaagggatcgcattgatc 53
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>48917_osa-miR393:pmrd
Length = 115
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tccaaagggatcgcattgatc 53
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>48731_mtr-miR393b:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tccaaagggatcgcattgatc 53
|||||||||||||||||||||
Sbjct: 6 tccaaagggatcgcattgatc 26
>48730_mtr-miR393:pmrd
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tccaaagggatcgcattgatc 53
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>48576_gma-miR393:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tccaaagggatcgcattgatc 53
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>48373_bna-miR393:pmrd
Length = 127
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tccaaagggatcgcattgatc 53
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>47287_ath-miRf10187-akr:pmrd
Length = 162
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tccaaagggatcgcattgatc 53
|||||||||||||||||||||
Sbjct: 12 tccaaagggatcgcattgatc 32
>47214_ath-miRf10114-akr:pmrd
Length = 131
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tccaaagggatcgcattgatc 53
|||||||||||||||||||||
Sbjct: 10 tccaaagggatcgcattgatc 30
>46999_ath-miR393b:pmrd
Length = 160
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tccaaagggatcgcattgatc 53
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>46998_ath-miR393a:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 tccaaagggatcgcattgatc 53
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
