miRNEST 2.0, an integrative microRNA resource :: BLAST
>49071_osa-miR818e:pmrd
Length = 225
Score = 77.8 bits (39), Expect = 4e-15
Identities = 74/83 (89%), Gaps = 2/83 (2%)
Strand = Plus / Minus
Query: 18 ctccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccactcgtct 76
|||||||||||||||||||||||||| || ||||| |||| | ||||||||||||||| |
Sbjct: 224 ctccgtcccataatataagggattttaagtttttgtttgt-attgtttgaccactcgttt 166
Query: 77 tattcaaataatttatgcaaata 99
|||||||| ||||| | ||||||
Sbjct: 165 tattcaaaaaatttgtacaaata 143
Score = 73.8 bits (37), Expect = 6e-14
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
|||||||||||||||||||| || ||| |||||||||||||| |||||||||| |||||
Sbjct: 63 aataagacgagtggtcaaacagtgcaagcaaaaactcaaaatcccttatattataggacg 4
Query: 244 g 244
|
Sbjct: 3 g 3
Score = 69.9 bits (35), Expect = 9e-13
Identities = 61/67 (91%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 20 ccgtcccataatataagggattttgag-ttttgcttgtaagtgtttgaccactcgtctta 78
|||||| |||||||||||||||||||| ||||||||| | |||||||||||||||||||
Sbjct: 3 ccgtcctataatataagggattttgagtttttgcttg-cactgtttgaccactcgtctta 61
Query: 79 ttcaaat 85
|| ||||
Sbjct: 62 tttaaat 68
Score = 63.9 bits (32), Expect = 6e-11
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaaccgtataagtaaaaactcaaaatcacttatattatgggacg 243
||||| |||||||||||||| || || ||||||| |||||| ||||||||||||||||
Sbjct: 162 aataaaacgagtggtcaaacaatacaaacaaaaacttaaaatcccttatattatgggacg 221
Query: 244 gagg 247
||||
Sbjct: 222 gagg 225
>51255_osa-miRf12040-akr:pmrd
Length = 102
Score = 58.0 bits (29), Expect = 4e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 41 caaaatcccttatattatgggacggagggagta 9
Score = 58.0 bits (29), Expect = 4e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 9 tactccctccgtcccataatataagggattttg 41
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 23 tcccataatataagggattttg 44
||||||||||||||||||||||
Sbjct: 83 tcccataatataagggattttg 62
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||| |||||||||
Sbjct: 62 caaaatcccttatattatgggagagagggagta 94
>51254_osa-miRf12039-akr:pmrd
Length = 102
Score = 58.0 bits (29), Expect = 4e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 41 caaaatcccttatattatgggacggagggagta 9
Score = 58.0 bits (29), Expect = 4e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 9 tactccctccgtcccataatataagggattttg 41
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 23 tcccataatataagggattttg 44
||||||||||||||||||||||
Sbjct: 83 tcccataatataagggattttg 62
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||| |||||||||
Sbjct: 62 caaaatcccttatattatgggagagagggagta 94
>51250_osa-miRf12035-akr:pmrd
Length = 119
Score = 58.0 bits (29), Expect = 4e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 220 caaaatcacttatattatgggacggagggagta 252
|||||| ||||||||||||||||||||||||||
Sbjct: 42 caaaattacttatattatgggacggagggagta 10
Score = 58.0 bits (29), Expect = 4e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| |||||||||||||||||||||||||||
Sbjct: 113 tactccctccgtcccataatataagggattttg 81
Score = 58.0 bits (29), Expect = 4e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagggagta 252
||||||| |||||||||||||||||||||||||
Sbjct: 81 caaaatcccttatattatgggacggagggagta 113
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataag 36
||||| |||||||||||||||||||
Sbjct: 10 tactccctccgtcccataatataag 34
>49070_osa-miR818d:pmrd
Length = 139
Score = 58.0 bits (29), Expect = 4e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 11 ttactctctccgtcccataatataagggatttt 43
||||||||||| |||||||||||||||||||||
Sbjct: 14 ttactctctccatcccataatataagggatttt 46
Score = 56.0 bits (28), Expect = 1e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggatttt 43
||||| ||||||||||||||||||||||||||
Sbjct: 127 tactccctccgtcccataatataagggatttt 96
Score = 56.0 bits (28), Expect = 1e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 221 aaaatcacttatattatgggacggagggagta 252
|||||| |||||||||||||||||||||||||
Sbjct: 96 aaaatcccttatattatgggacggagggagta 127
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 221 aaaatcacttatattatgggacggagggagtaa 253
|||||| |||||||||||||| |||| ||||||
Sbjct: 46 aaaatcccttatattatgggatggagagagtaa 14
>49067_osa-miR818a:pmrd
Length = 144
Score = 58.0 bits (29), Expect = 4e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 19 tccgtcccataatataagggattttgagt 47
|||||||||||||||||||||||||||||
Sbjct: 139 tccgtcccataatataagggattttgagt 111
Score = 50.1 bits (25), Expect = 9e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 217 actcaaaatcacttatattatgggacgga 245
|||||||||| ||||||||||||||||||
Sbjct: 111 actcaaaatcccttatattatgggacgga 139
>50738_osa-miRf11523-akr:pmrd
Length = 108
Score = 56.0 bits (28), Expect = 1e-08
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 213 aaaaactcaaaatcacttatattatgggacggagggagta 252
||||||| |||||| |||||||||||||||||||||||||
Sbjct: 59 aaaaacttaaaatc-cttatattatgggacggagggagta 97
Score = 48.1 bits (24), Expect = 3e-06
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttgagttttgcttg 55
||||| |||||||||||||||||| ||||||| |||||| ||||
Sbjct: 97 tactccctccgtcccataatataa-ggattttaagtttttcttg 55
>50587_osa-miRf11372-akr:pmrd
Length = 126
Score = 54.0 bits (27), Expect = 6e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 6 gaatattactctctccgtcccataatataagggat 40
|||| |||||| |||||||||||||||||||||||
Sbjct: 1 gaatgttactccctccgtcccataatataagggat 35
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 228 cttatattatgggacggagggagtaa 253
||||||||||||||||||||||||||
Sbjct: 31 cttatattatgggacggagggagtaa 6
Score = 50.1 bits (25), Expect = 9e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| ||||||||||||||||||||| |||||
Sbjct: 121 tactccctccgtcccataatataagggtttttg 89
Score = 50.1 bits (25), Expect = 9e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 228 cttatattatgggacggagggagta 252
|||||||||||||||||||||||||
Sbjct: 97 cttatattatgggacggagggagta 121
>49427_osa-miRf10212-akr:pmrd
Length = 97
Score = 54.0 bits (27), Expect = 6e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 19 tccgtcccataatataagggattttga 45
|||||||||||||||||||||||||||
Sbjct: 71 tccgtcccataatataagggattttga 97
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 10 attactctctccgtcccataatataagggattttga 45
||||||| ||||||||| ||||| ||||||||||||
Sbjct: 36 attactccctccgtcccctaatacaagggattttga 1
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 219 tcaaaatcacttatattatgggacggagggagtaa 253
|||||||| ||| ||||| ||||||||||||||||
Sbjct: 1 tcaaaatcccttgtattaggggacggagggagtaa 35
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 219 tcaaaatcacttatattatgggacgga 245
|||||||| ||||||||||||||||||
Sbjct: 97 tcaaaatcccttatattatgggacgga 71
>49068_osa-miR818b:pmrd
Length = 113
Score = 54.0 bits (27), Expect = 6e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 18 ctccgtcccataatataagggattttg 44
|||||||||||||||||||||||||||
Sbjct: 112 ctccgtcccataatataagggattttg 86
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacggagg 247
||||||| ||||||||||||||||||||
Sbjct: 86 caaaatcccttatattatgggacggagg 113
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 221 aaaatcacttatattatgggacggagg 247
|||||| ||||||||||||||||||||
Sbjct: 27 aaaatctcttatattatgggacggagg 1
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 18 ctccgtcccataatataagggatttt 43
||||||||||||||||||| ||||||
Sbjct: 2 ctccgtcccataatataagagatttt 27
>50274_osa-miRf11059-akr:pmrd
Length = 172
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttga 45
||||| ||||||||||| ||||||||||||||||
Sbjct: 34 tactccctccgtcccatgatataagggattttga 1
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 219 tcaaaatcacttatattatgggacggagggagta 252
|||||||| ||||||| |||||||||||||||||
Sbjct: 1 tcaaaatcccttatatcatgggacggagggagta 34
>49069_osa-miR818c:pmrd
Length = 176
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 19 tccgtcccataatataagggattttg 44
||||||||||||||||||||||||||
Sbjct: 164 tccgtcccataatataagggattttg 139
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 220 caaaatcacttatattatgggacgga 245
||||||| ||||||||||||||||||
Sbjct: 139 caaaatcccttatattatgggacgga 164
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 cgtcccataatataagggattttga 45
||||| |||||||||||||||||||
Sbjct: 16 cgtcctataatataagggattttga 40
>54695_tae-miR1120:pmrd
Length = 119
Score = 50.1 bits (25), Expect = 9e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 228 cttatattatgggacggagggagta 252
|||||||||||||||||||||||||
Sbjct: 42 cttatattatgggacggagggagta 18
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 tactctctccgtcccataatataag 36
||||| |||||||||||||||||||
Sbjct: 18 tactccctccgtcccataatataag 42
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 228 cttatattatgggacggagggagta 252
||||||||||| |||||||||||||
Sbjct: 75 cttatattatgagacggagggagta 99
>51209_osa-miRf11994-akr:pmrd
Length = 183
Score = 50.1 bits (25), Expect = 9e-07
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 47 ttttgcttgtaagtgtttgaccactcgtcttattcaa 83
||||||||| || ||||||||||||||||||||||||
Sbjct: 176 ttttgcttgcaa-tgtttgaccactcgtcttattcaa 141
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 gtttgaccactcgtcttattcaaa 84
||||||||||| ||||||||||||
Sbjct: 21 gtttgaccacttgtcttattcaaa 44
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaac 203
||||||||||||||||||||
Sbjct: 144 aataagacgagtggtcaaac 163
>49422_osa-miRf10207-akr:pmrd
Length = 165
Score = 50.1 bits (25), Expect = 9e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaa 84
|||||||||||||||||||||||||
Sbjct: 154 tgtttgaccactcgtcttattcaaa 130
Score = 48.1 bits (24), Expect = 3e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 60 tgtttgaccactcgtcttattcaaataatttatgcaaata 99
||||||| ||||||||||||||||| || || ||||||||
Sbjct: 12 tgtttgatcactcgtcttattcaaaaaaattgtgcaaata 51
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 184 aataagacgagtggtcaaac 203
||||||||||||||||||||
Sbjct: 134 aataagacgagtggtcaaac 153
>49024_osa-miR806a:pmrd
Length = 252
Score = 50.1 bits (25), Expect = 9e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 59 gtgtttgaccactcgtcttattcaaataattta 91
||||||||||| |||||||||||||| ||||||
Sbjct: 56 gtgtttgaccattcgtcttattcaaaaaattta 88
>50827_osa-miRf11612-akr:pmrd
Length = 126
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 221 aaaatcacttatattatgggacggagggagta 252
||||||||||||||| |||||||||||||||
Sbjct: 95 aaaatcacttatatttagggacggagggagta 126
>49787_osa-miRf10572-akr:pmrd
Length = 109
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 233 attatgggacggagggagtaaata 256
||||||||||||||||||||||||
Sbjct: 28 attatgggacggagggagtaaata 5
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 233 attatgggacggagggagta 252
||||||||||||||||||||
Sbjct: 82 attatgggacggagggagta 101
>49786_osa-miRf10571-akr:pmrd
Length = 109
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 233 attatgggacggagggagtaaata 256
||||||||||||||||||||||||
Sbjct: 28 attatgggacggagggagtaaata 5
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 233 attatgggacggagggagta 252
||||||||||||||||||||
Sbjct: 82 attatgggacggagggagta 101
>50275_osa-miRf11060-akr:pmrd
Length = 166
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattt 42
||||| ||||||||||| |||||||||||||
Sbjct: 31 tactccctccgtcccatgatataagggattt 1
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 222 aaatcacttatattatgggacggagggagta 252
||||| ||||||| |||||||||||||||||
Sbjct: 1 aaatcccttatatcatgggacggagggagta 31
>49026_osa-miR806c:pmrd
Length = 270
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaataattt 90
|||||||||| |||||||||||||| |||||
Sbjct: 209 tgtttgaccattcgtcttattcaaaaaattt 179
>49126_osa-miR1442:pmrd
Length = 185
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tccgtcccataatataagggat 40
||||||||||||||||||||||
Sbjct: 124 tccgtcccataatataagggat 145
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 228 cttatattatgggacggagggagta 252
|||||||||||||||||| ||||||
Sbjct: 141 cttatattatgggacggatggagta 117
>49120_osa-miR1436:pmrd
Length = 161
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 231 atattatgggacggagggagta 252
||||||||||||||||||||||
Sbjct: 33 atattatgggacggagggagta 12
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 233 attatgggacggagggagta 252
||||||||||||||||||||
Sbjct: 123 attatgggacggagggagta 142
>48794_oni-miR812:pmrd
Length = 172
Score = 44.1 bits (22), Expect = 5e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 60 tgtttgaccactcgtcttattcaaataatttatg 93
|||||||||| |||||||||||||| | ||||||
Sbjct: 158 tgtttgaccattcgtcttattcaaaaactttatg 125
>50305_osa-miRf11090-akr:pmrd
Length = 116
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 12 tactctctccgtcccataatataagggattttg 44
||||| ||| |||||| ||||||||||||||||
Sbjct: 108 tactccctctgtcccaaaatataagggattttg 76
>50057_osa-miRf10842-akr:pmrd
Length = 130
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 234 ttatgggacggagggagtaaa 254
|||||||||||||||||||||
Sbjct: 28 ttatgggacggagggagtaaa 8
>50045_osa-miRf10830-akr:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 235 tatgggacggagggagtaaat 255
|||||||||||||||||||||
Sbjct: 28 tatgggacggagggagtaaat 8
>50044_osa-miRf10829-akr:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 235 tatgggacggagggagtaaat 255
|||||||||||||||||||||
Sbjct: 33 tatgggacggagggagtaaat 13
