miRNEST 2.0, an integrative microRNA resource :: BLAST
>49026_osa-miR806c:pmrd
Length = 270
Score = 274 bits (138), Expect = 3e-74
Identities = 207/231 (89%), Gaps = 1/231 (0%)
Strand = Plus / Plus
Query: 21 gtttcagaatgtttgacaccgttagactttttattacgtgtttgaccattcgtcttattn 80
|||||| |||||||||||||||| ||||||||| ||||| ||||| |||||||||||||
Sbjct: 28 gtttcaaaatgtttgacaccgtt-gactttttagtacgtatttgatcattcgtcttattc 86
Query: 81 nnnnnntttaagtaattatttattcttttcatatcatttgattcattgttaaatatattt 140
|||||||||||||||||| |||||||||| ||||||| ||||||||||||| ||
Sbjct: 87 aaaaaatttaagtaattatttatttttttcatatcgtttgatttattgttaaatatactt 146
Query: 141 tcatgtacatatatagttttacatattttacaaattattttgaataagacaaacggtcaa 200
||||||||| |||||||||||||||||| | ||| | ||||||||||||| || ||||||
Sbjct: 147 tcatgtacacatatagttttacatatttcataaaattttttgaataagacgaatggtcaa 206
Query: 201 acatgtgctaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 251
|||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 207 acatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggatggagtat 257
Score = 89.7 bits (45), Expect = 1e-18
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 178 ttttgaataagacaaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttga 237
||||||||||||| || | ||||| | || ||||||||||||||||||||||||||||||
Sbjct: 90 ttttgaataagacgaatgatcaaatacgtactaaaaagtcaacggtgtcaaacattttga 31
Query: 238 aacggatggagta 250
|||||| ||||||
Sbjct: 30 aacggagggagta 18
Score = 63.9 bits (32), Expect = 6e-11
Identities = 48/52 (92%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 28 aatgtttgacaccgttagactttttattacgtgtttgaccattcgtcttatt 79
|||||||||||||||| ||||||||| || |||||||||||||||||||||
Sbjct: 239 aatgtttgacaccgtt-gactttttagcacatgtttgaccattcgtcttatt 189
>49027_osa-miR806d:pmrd
Length = 271
Score = 264 bits (133), Expect = 3e-71
Identities = 205/230 (89%), Gaps = 1/230 (0%)
Strand = Plus / Plus
Query: 22 tttcagaatgtttgacaccgttagactttttattacgtgtttgaccattcgtcttattnn 81
||||| ||||||||| |||||| || |||||| ||||||||||||||||||| |||||
Sbjct: 27 tttcaaaatgtttgataccgtt-gagtttttaatacgtgtttgaccattcgttttattca 85
Query: 82 nnnnntttaagtaattatttattcttttcatatcatttgattcattgttaaatatatttt 141
||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 86 aaaaatttaaataattatttattcttttcatatcatttgattcattgttaaatatacttt 145
Query: 142 catgtacatatatagttttacatattttacaaattattttgaataagacaaacggtcaaa 201
||| | || |||||||||||||||||| |||| || ||| ||||||||| ||||||||||
Sbjct: 146 catatgcacatatagttttacatatttcacaatttttttagaataagactaacggtcaaa 205
Query: 202 catgtgctaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 251
|||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 206 catgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 255
Score = 60.0 bits (30), Expect = 9e-10
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 178 ttttgaataagacaaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttga 237
|||||||||| || || ||||||||| || |||||| |||||||| |||||||||||||
Sbjct: 88 ttttgaataaaacgaatggtcaaacacgtattaaaaactcaacggtatcaaacattttga 29
Query: 238 aa 239
||
Sbjct: 28 aa 27
Score = 48.1 bits (24), Expect = 3e-06
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 28 aatgtttgacaccgttagactttttattacgtgtttgaccattcgtcttatt 79
|||||||||||||||| ||||||||| || ||||||||| || ||||||||
Sbjct: 237 aatgtttgacaccgtt-gactttttagcacatgtttgaccgttagtcttatt 187
>49030_osa-miR806g:pmrd
Length = 240
Score = 258 bits (130), Expect = 2e-69
Identities = 206/231 (89%), Gaps = 2/231 (0%)
Strand = Plus / Plus
Query: 21 gtttcagaatgtttgacaccgttagactttttattacgtgtttgaccattcgtcttattn 80
|||||| |||||||||||||| | ||||||||| ||||||||||| ||||||| |||||
Sbjct: 11 gtttcaaaatgtttgacaccgct-gactttttagtacgtgtttgatcattcgttttattc 69
Query: 81 nnnnnnt-ttaagtaattatttattcttttcatatcatttgattcattgttaaatatatt 139
|||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 70 caaaaaaattaagtaattatttattctttttatatcatttgattcattgttaaatatact 129
Query: 140 ttcatgtacatatatagttttacatattttacaaattattttgaataagacaaacggtca 199
|||||||||| || ||||||||||||||| || || | ||||||||||||| ||||||||
Sbjct: 130 ttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaacggtca 189
Query: 200 aacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggatggagta 250
|||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 190 aacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagta 240
Score = 71.9 bits (36), Expect = 2e-13
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 197 tcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggatggag 248
||||||| || ||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 54 tcaaacacgtactaaaaagtcagcggtgtcaaacattttgaaacggagggag 3
Score = 61.9 bits (31), Expect = 2e-10
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 21 gtttcagaatgtttgacaccgttagactttttattacgtgtttgaccattcgtcttatt 79
|||||| |||||||||||||||| ||||||||| || ||||||||| |||||||||||
Sbjct: 230 gtttcaaaatgtttgacaccgtt-gactttttagcacatgtttgaccgttcgtcttatt 173
>49024_osa-miR806a:pmrd
Length = 252
Score = 244 bits (123), Expect = 3e-65
Identities = 207/232 (89%), Gaps = 4/232 (1%)
Strand = Plus / Plus
Query: 21 gtttcagaatgtttgacaccgttagactttttat-tacgtgtttgaccattcgtcttatt 79
|||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 19 gtttcaaaatgtttgacaccgtt-gactttttaaatacgtgtttgaccattcgtcttatt 77
Query: 80 nnnnnnntttaagtaattatttattcttttcatatcatttgattcattgttaaatatatt 139
||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 78 caaaaaatttaagtaattatttattcttttcata-catttgattcattgttaaatatact 136
Query: 140 ttcatgtacatatatagttttacatattttacaaattattttgaataagacaaacggtca 199
|||||||||| |||||||||||| ||||| | ||| | ||| |||||||| |||||| |
Sbjct: 137 ttcatgtacacatatagttttacgtatttcaaaaaaaaattt-aataagacgaacggtta 195
Query: 200 aacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 251
|||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 196 aacatgtgctaaaaagtcaacggtgtcaaacattttaaaacggagggagtat 247
Score = 77.8 bits (39), Expect = 4e-15
Identities = 61/67 (91%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 178 ttttgaataagacaaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaacattttg 236
||||||||||||| || ||||||||| || | |||||||||||||||||||||||||||
Sbjct: 82 ttttgaataagacgaatggtcaaacacgtatttaaaaagtcaacggtgtcaaacattttg 23
Query: 237 aaacgga 243
|||||||
Sbjct: 22 aaacgga 16
Score = 48.1 bits (24), Expect = 3e-06
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 28 aatgtttgacaccgttagactttttattacgtgtttgaccattcgtcttatt 79
|||||||||||||||| ||||||||| || ||||| ||| |||||||||||
Sbjct: 229 aatgtttgacaccgtt-gactttttagcacatgtttaaccgttcgtcttatt 179
>49025_osa-miR806b:pmrd
Length = 215
Score = 220 bits (111), Expect = 4e-58
Identities = 188/212 (88%), Gaps = 3/212 (1%)
Strand = Plus / Plus
Query: 28 aatgtttgacaccgttagactttttat-tacgtgtttgaccattcgtcttattnnnnnnn 86
|||||||||||||||| ||||||||| |||||||||||| ||||||||||||
Sbjct: 5 aatgtttgacaccgtt-gactttttaagtacgtgtttgactattcgtcttattcaaaaaa 63
Query: 87 -tttaagtaattatttattcttttcatatcatttgattcattgttaaatatattttcatg 145
||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 64 atttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatg 123
Query: 146 tacatatatagttttacatattttacaaattattttgaataagacaaacggtcaaacatg 205
|||| ||||| |||||||||||| ||||||| |||| |||||||| ||| ||||| |||
Sbjct: 124 tacacatataattttacatatttcacaaattttttttaataagacgaacagtcaagaatg 183
Query: 206 tgctaaaaagtcaacggtgtcaaacattttga 237
|||||||||||||||||||||||||| |||||
Sbjct: 184 tgctaaaaagtcaacggtgtcaaacagtttga 215
Score = 69.9 bits (35), Expect = 9e-13
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 172 aaattattttgaataagacaaacggtcaaacatgtgct-aaaaagtcaacggtgtcaaac 230
||||| ||||||||||||| || |||||||| || || |||||||||||||||||||||
Sbjct: 67 aaatttttttgaataagacgaatagtcaaacacgtacttaaaaagtcaacggtgtcaaac 8
Query: 231 attttga 237
|||||||
Sbjct: 7 attttga 1
>49031_osa-miR806h:pmrd
Length = 271
Score = 210 bits (106), Expect = 4e-55
Identities = 193/223 (86%), Gaps = 1/223 (0%)
Strand = Plus / Plus
Query: 28 aatgtttgacaccgttagactttttattacgtgtttgaccattcgtcttattnnnnnnnt 87
||||||| || ||||| |||||||||| | ||||||||| ||||||||||| |
Sbjct: 31 aatgtttaacgccgtt-gactttttatcatatgtttgaccgttcgtcttattcaaaaaat 89
Query: 88 ttaagtaattatttattcttttcatatcatttgattcattgttaaatatattttcatgta 147
||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 90 ttaagtaattattaattcttttcctatcatttgattcattgttaaatatatttttatgta 149
Query: 148 catatatagttttacatattttacaaattattttgaataagacaaacggtcaaacatgtg 207
||||| |||||||||| | ||||| ||||||||||||| || |||||||||||||
Sbjct: 150 ggcatataattttacatatctcacaaaagtttttgaataagacgaatggtcaaacatgtg 209
Query: 208 ctaaaaagtcaacggtgtcaaacattttgaaacggatggagta 250
||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 210 ctaaaaagtcaacggtgtcaaacatttagaaacggagggagta 252
Score = 89.7 bits (45), Expect = 1e-18
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 178 ttttgaataagacaaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttga 237
||||||||||||| ||||||||||||| || |||||||||||||| || |||||||| ||
Sbjct: 86 ttttgaataagacgaacggtcaaacatatgataaaaagtcaacggcgttaaacatttcga 27
Query: 238 aacggatggagta 250
|||||| ||||||
Sbjct: 26 aacggagggagta 14
Score = 63.9 bits (32), Expect = 6e-11
Identities = 48/52 (92%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 28 aatgtttgacaccgttagactttttattacgtgtttgaccattcgtcttatt 79
|||||||||||||||| ||||||||| || |||||||||||||||||||||
Sbjct: 235 aatgtttgacaccgtt-gactttttagcacatgtttgaccattcgtcttatt 185
>49028_osa-miR806e:pmrd
Length = 255
Score = 198 bits (100), Expect = 2e-51
Identities = 196/229 (85%), Gaps = 1/229 (0%)
Strand = Plus / Plus
Query: 21 gtttcagaatgtttgacaccgttagactttttattacgtgtttgaccattcgtcttattn 80
|||||| |||||||||| ||||| ||||||||| | ||||||||| |||||||||||
Sbjct: 19 gtttcaaaatgtttgacgccgtt-gactttttagcatatgtttgaccgttcgtcttattc 77
Query: 81 nnnnnntttaagtaattatttattcttttcatatcatttgattcattgttaaatatattt 140
|||||||||||||| ||||||||| |||||||| ||| ||||||||||||||||
Sbjct: 78 aaaaaatttaagtaattattaattcttttcttatcatttaatttattgttaaatatattt 137
Query: 141 tcatgtacatatatagttttacatattttacaaattattttgaataagacaaacggtcaa 200
| ||||| ||||| |||||||||||| ||||| |||| |||||||| |||||||||
Sbjct: 138 ttatgtaggcatataattttacatatttcacaaaagtttttaaataagacgaacggtcaa 197
Query: 201 acatgtgctaaaaagtcaacggtgtcaaacattttgaaacggatggagt 249
||||||||||||||||||||||||||||| |||| |||||||| |||||
Sbjct: 198 acatgtgctaaaaagtcaacggtgtcaaatatttcgaaacggagggagt 246
Score = 123 bits (62), Expect = 7e-29
Identities = 71/74 (95%)
Strand = Plus / Minus
Query: 178 ttttgaataagacaaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttga 237
||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 81 ttttgaataagacgaacggtcaaacatatgctaaaaagtcaacggcgtcaaacattttga 22
Query: 238 aacggatggagtat 251
||||||||||||||
Sbjct: 21 aacggatggagtat 8
Score = 48.1 bits (24), Expect = 3e-06
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 32 tttgacaccgttagactttttattacgtgtttgaccattcgtcttatt 79
|||||||||||| ||||||||| || ||||||||| |||||||||||
Sbjct: 226 tttgacaccgtt-gactttttagcacatgtttgaccgttcgtcttatt 180
>49029_osa-miR806f:pmrd
Length = 241
Score = 194 bits (98), Expect = 2e-50
Identities = 197/231 (85%), Gaps = 1/231 (0%)
Strand = Plus / Plus
Query: 21 gtttcagaatgtttgacaccgttagactttttattacgtgtttgaccattcgtcttattn 80
||||| ||||||||||| ||||| ||||||||||||| ||||||||| |||||||||||
Sbjct: 12 gtttcggaatgtttgacgccgtt-gactttttattacatgtttgaccgttcgtcttattc 70
Query: 81 nnnnnntttaagtaattatttattcttttcatatcatttgattcattgttaaatatattt 140
||| | ||| | ||||||||| |||||||||||||||||||||||||||||
Sbjct: 71 aaaaaattttgacacttaataattcttttcctatcatttgattcattgttaaatatattt 130
Query: 141 tcatgtacatatatagttttacatattttacaaattattttgaataagacaaacggtcaa 200
||||||| ||||| |||||||||||| | ||| ||||||||||||| ||| |||||
Sbjct: 131 tcatgtaggcatataattttacatatttcataaaagtttttgaataagacgaacagtcaa 190
Query: 201 acatgtgctaaaaagtcaacggtgtcaaacattttgaaacggatggagtat 251
||||||||||||||||||||||||||||| |||| |||||||| |||||||
Sbjct: 191 acatgtgctaaaaagtcaacggtgtcaaatatttcgaaacggagggagtat 241
Score = 91.7 bits (46), Expect = 3e-19
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 178 ttttgaataagacaaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttga 237
||||||||||||| ||||||||||||||| |||||||||||||| |||||||||| ||
Sbjct: 74 ttttgaataagacgaacggtcaaacatgtaataaaaagtcaacggcgtcaaacattccga 15
Query: 238 aacggatggagtat 251
|||||| |||||||
Sbjct: 14 aacggagggagtat 1
Score = 40.1 bits (20), Expect = 8e-04
Identities = 42/48 (87%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 32 tttgacaccgttagactttttattacgtgtttgaccattcgtcttatt 79
|||||||||||| ||||||||| || |||||||| |||||||||||
Sbjct: 219 tttgacaccgtt-gactttttagcacatgtttgactgttcgtcttatt 173
>48799_oru-miR806:pmrd
Length = 242
Score = 111 bits (56), Expect = 3e-25
Identities = 104/120 (86%)
Strand = Plus / Plus
Query: 87 tttaagtaattatttattcttttcatatcatttgattcattgttaaatatattttcatgt 146
|||||||||||| | |||| |||| |||||||||||| ||||||||||||| ||| || |
Sbjct: 78 tttaagtaattaataattcctttcctatcatttgatttattgttaaatatacttttatat 137
Query: 147 acatatatagttttacatattttacaaattattttgaataagacaaacggtcaaacatgt 206
| | ||||||||||| |||||| ||||| ||||||||||||| |||||||||||||||
Sbjct: 138 atacatatagttttatatatttcacaaaaatttttgaataagacgaacggtcaaacatgt 197
Score = 58.0 bits (29), Expect = 4e-09
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 172 aaattattttgaataagacaaacggtcaaacatgtgctaaaaagtcaacggtgtcaaaca 231
||||| ||||||||||||| |||||||||| || | ||||||||||||| |||||| |
Sbjct: 80 aaatttttttgaataagacgaacggtcaaatatatttaaaaaagtcaacggcgtcaaata 21
Query: 232 ttttg 236
|||||
Sbjct: 20 ttttg 16
>49189_osa-miR1884a:pmrd
Length = 214
Score = 50.1 bits (25), Expect = 9e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 210 aaaaagtcaacggtgtcaaacattttgaa 238
|||||||||||||||||| ||||||||||
Sbjct: 186 aaaaagtcaacggtgtcatacattttgaa 214
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 gtttgaccattcgtcttatt 79
||||||||||||||||||||
Sbjct: 36 gtttgaccattcgtcttatt 55
>48794_oni-miR812:pmrd
Length = 172
Score = 48.1 bits (24), Expect = 3e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 178 ttttgaataagacaaacggtcaaacatgtgctaaaaagtc 217
||||||||||||| || ||||||||||||| ||||||||
Sbjct: 133 ttttgaataagacgaatggtcaaacatgtgagaaaaagtc 172
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 45 gactttttattacgtgtttgaccattcgtcttatt 79
|||||||| | || |||||||||||||||||||||
Sbjct: 172 gactttttctcacatgtttgaccattcgtcttatt 138
>48793_obt-miR812:pmrd
Length = 175
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 183 aataagacaaacggtcaaac 202
||||||||||||||||||||
Sbjct: 141 aataagacaaacggtcaaac 160
