miRNEST 2.0, an integrative microRNA resource :: BLAST
>54777_vvi-miR159c:pmrd
Length = 190
Score = 54.0 bits (27), Expect = 3e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 2 gagctccttgaagtccaatagaggatctgagtgggaatatcgagctgctggtctatggat 61
|||||||||||||||||||||||| ||| | |||| | || ||||||||| |||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 62 ccc 64
|||
Sbjct: 71 ccc 73
Score = 50.1 bits (25), Expect = 5e-07
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 95 ttgtggcttgcatacgccaggagattcattatcctttttctgatccttttttggattgaa 154
|||||||||||||| |||||| | |||||||| || ||||||| |||||||||||
Sbjct: 111 ttgtggcttgcatatctcaggagctgcattatccaagtttagatccttgtttggattgaa 170
Query: 155 gggagctct 163
|||||||||
Sbjct: 171 gggagctct 179
>54540_sly-miR159:pmrd
Length = 177
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 135 tgatccttttttggattgaagggagctct 163
||||| |||||||||||||||||||||||
Sbjct: 148 tgatcattttttggattgaagggagctct 176
>54378_pvu-miR159:pmrd
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2 gagctccttgaagtccaatagaggatct 29
||||||||||||||||||| ||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatct 31
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 137 atccttttttggattgaagggagctct 163
|||||| ||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctct 172
>54377_pvu-miR159:pmrd
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2 gagctccttgaagtccaatagaggatct 29
||||||||||||||||||| ||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatct 31
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 137 atccttttttggattgaagggagctct 163
|||||| ||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctct 172
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 2 gagctccttgaagtccaatagagg 25
||||||||||||||||||||||||
Sbjct: 8 gagctccttgaagtccaatagagg 31
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 136 gatccttttttggattgaagggagctct 163
||||| ||||||||||||||||||||||
Sbjct: 141 gatccctttttggattgaagggagctct 168
>51604_ptc-miR159c:pmrd
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 2 gagctccttgaagtccaatagagg 25
||||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagagg 36
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 136 gatccttttttggattgaagggagctct 163
||||| ||||||||||||||||||||||
Sbjct: 146 gatccctttttggattgaagggagctct 173
>51603_ptc-miR159b:pmrd
Length = 187
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 136 gatccttttttggattgaagggagctct 163
|||| |||||||||||||||||||||||
Sbjct: 150 gatctttttttggattgaagggagctct 177
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 gagctccttgaagtccaataga 23
||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaataga 34
>51602_ptc-miR159a:pmrd
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 2 gagctccttgaagtccaatagagg 25
||||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagagg 36
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 136 gatccttttttggattgaagggagctct 163
||||| ||||||||||||||||||||||
Sbjct: 146 gatccctttttggattgaagggagctct 173
>48539_gma-miR159a:pmrd
Length = 214
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2 gagctccttgaagtccaatagaggatct 29
||||||||||||||||||| ||||||||
Sbjct: 23 gagctccttgaagtccaattgaggatct 50
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 139 ccttttttggattgaagggagctct 163
|||| ||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctct 194
>54937_zma-miR159m:pmrd
Length = 457
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>54931_zma-miR159b:pmrd
Length = 221
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 182 tttggattgaagggagctct 201
>54930_zma-miR159a:pmrd
Length = 246
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 207 tttggattgaagggagctct 226
>54674_tae-miR159b:pmrd
Length = 255
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctct 249
>54673_tae-miR159a:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>54653_spr-miR159:pmrd
Length = 392
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>54631_sof-miR159d:pmrd
Length = 265
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 226 tttggattgaagggagctct 245
>54629_sof-miR159b:pmrd
Length = 266
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 227 tttggattgaagggagctct 246
>54628_sof-miR159a:pmrd
Length = 265
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 226 tttggattgaagggagctct 245
>54392_sar-miR159:pmrd
Length = 175
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 155 tttggattgaagggagctct 174
>51338_pgl-miR159:pmrd
Length = 226
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 206 tttggattgaagggagctct 225
>48825_osa-miR159m:pmrd
Length = 249
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 229 tttggattgaagggagctct 248
>48820_osa-miR159b:pmrd
Length = 188
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctct 177
>48819_osa-miR159a:pmrd
Length = 272
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctct 261
>48796_oru-miR159:pmrd
Length = 274
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctct 261
>48701_mtr-miR159c:pmrd
Length = 44
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>48699_mtr-miR159a:pmrd
Length = 168
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 148 tttggattgaagggagctct 167
>48686_ltu-miR159:pmrd
Length = 345
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>48657_hvv-miR159b:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>48656_hvv-miR159a:pmrd
Length = 303
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>48395_bra-miR159a:pmrd
Length = 185
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctct 182
>48339_bna-miR159:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctct 180
>46932_ath-miR159b:pmrd
Length = 196
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 168 tttggattgaagggagctct 187
>46931_ath-miR159a:pmrd
Length = 184
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tttggattgaagggagctct 163
||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctct 182
