miRNEST 2.0, an integrative microRNA resource :: BLAST
>52045_ptc-miRf10223-akr:pmrd
Length = 86
Score = 89.7 bits (45), Expect = 3e-19
Identities = 74/81 (91%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatggatgacttgcaatgaa-tatgcatctcactccttt 59
||||||||||||||||||||||||| |||| ||||||| | | |||||| |||||||||
Sbjct: 4 tgacagaagatagagagcacagatg-atgatatgcaatggactctgcatcccactccttt 62
Query: 60 gtgctctctatgcttctgtca 80
|||||||||||||||||||||
Sbjct: 63 gtgctctctatgcttctgtca 83
>51600_ptc-miR156j:pmrd
Length = 100
Score = 89.7 bits (45), Expect = 3e-19
Identities = 74/81 (91%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatggatgacttgcaatgaa-tatgcatctcactccttt 59
||||||||||||||||||||||||| |||| ||||||| | | |||||| |||||||||
Sbjct: 12 tgacagaagatagagagcacagatg-atgatatgcaatggactctgcatcccactccttt 70
Query: 60 gtgctctctatgcttctgtca 80
|||||||||||||||||||||
Sbjct: 71 gtgctctctatgcttctgtca 91
>54774_vvi-miR156i:pmrd
Length = 103
Score = 79.8 bits (40), Expect = 3e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatggatgacttgcaatgaatatgcatctcactcctttg 60
||||||||||||||||||||||||| |||| ||||| || ||||||||||||||||
Sbjct: 12 tgacagaagatagagagcacagatg-atgaaatgcaaggagccagcatctcactcctttg 70
Query: 61 tgctctctatgcttctgtca 80
|||||||||| |||||||||
Sbjct: 71 tgctctctattcttctgtca 90
>54772_vvi-miR156g:pmrd
Length = 103
Score = 79.8 bits (40), Expect = 3e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatggatgacttgcaatgaatatgcatctcactcctttg 60
||||||||||||||||||||||||| |||| |||| || | |||||||||||||||||
Sbjct: 12 tgacagaagatagagagcacagatg-atgatgtgcatggagtttgcatctcactcctttg 70
Query: 61 tgctctctatgcttctgtca 80
||||||||| |||||||||
Sbjct: 71 tgctctctagacttctgtca 90
>46862_aqc-miR156b:pmrd
Length = 83
Score = 77.8 bits (39), Expect = 1e-15
Identities = 73/82 (89%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatggatgacttgcaatgaa--tatgcatctcactcctt 58
||||||||||||||||||||||||| |||| |||| || | |||||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatg-atgatatgcatggagagtctgcatctcactcctt 59
Query: 59 tgtgctctctatgcttctgtca 80
||||||||||||||||||||||
Sbjct: 60 tgtgctctctatgcttctgtca 81
>51599_ptc-miR156i:pmrd
Length = 99
Score = 75.8 bits (38), Expect = 4e-15
Identities = 70/78 (89%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatggatgacttgcaat-gaatatgcatctcactccttt 59
||||||||||||||||||||||||| ||| ||||| | || | || |||||||||||||
Sbjct: 12 tgacagaagatagagagcacagatg-atgttttgcagtagactctggatctcactccttt 70
Query: 60 gtgctctctatgcttctg 77
||||||||||||||||||
Sbjct: 71 gtgctctctatgcttctg 88
>46861_aqc-miR156a:pmrd
Length = 81
Score = 71.9 bits (36), Expect = 6e-14
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatggatgacttgcaatgaatatgcatctcactcctttg 60
|||||||||||||||||||||||| || || ||||| || | |||||||| | |||||
Sbjct: 1 tgacagaagatagagagcacagat-gacgaattgcatggagtttgcatctcgatactttg 59
Query: 61 tgctctctatgcttctgtca 80
||||||||||||||||||||
Sbjct: 60 tgctctctatgcttctgtca 79
>48631_gra-miR157b:pmrd
Length = 91
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 43 atgcatctcactcctttgtgctctctatgcttctgtca 80
||||||| ||||||||||||||||||||||||||||||
Sbjct: 49 atgcatcccactcctttgtgctctctatgcttctgtca 86
>48695_mtr-miR156e:pmrd
Length = 172
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 44 tgcatctcactcctttgtgctctctatgcttctgtca 80
||||| |||||||||||||||||||||||||||||||
Sbjct: 131 tgcatatcactcctttgtgctctctatgcttctgtca 167
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatg 25
|||||||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcacagatg 31
>48630_gra-miR157a:pmrd
Length = 101
Score = 60.0 bits (30), Expect = 2e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 43 atgcatctcactcctttgtgctctctatgcttctgtca 80
||||||| |||||||||||||||| |||||||||||||
Sbjct: 59 atgcatcccactcctttgtgctctttatgcttctgtca 96
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatg 25
|||||||||||||||||||||||||
Sbjct: 6 tgacagaagatagagagcacagatg 30
>52807_ptc-miRf10985-akr:pmrd
Length = 87
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 44 tgcatctcactcctttgtgctctctatgcttctgtca 80
|||||||||||||||||||||||||| |||||||||
Sbjct: 49 tgcatctcactcctttgtgctctctagtcttctgtca 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcac 22
>51598_ptc-miR156h:pmrd
Length = 103
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 44 tgcatctcactcctttgtgctctctatgcttctgtca 80
|||||||||||||||||||||||||| |||||||||
Sbjct: 58 tgcatctcactcctttgtgctctctagtcttctgtca 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcac 31
>51597_ptc-miR156g:pmrd
Length = 103
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 44 tgcatctcactcctttgtgctctctatgcttctgtca 80
|||||||||||||||||||||||||| |||||||||
Sbjct: 58 tgcatctcactcctttgtgctctctagtcttctgtca 94
>48531_gma-miR156d:pmrd
Length = 151
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 44 tgcatctcactcctttgtgctctctatgcttctgtca 80
||||||| ||||||||||||||||||| |||||||||
Sbjct: 95 tgcatcttactcctttgtgctctctatacttctgtca 131
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatg 25
|||||||||||||||||||||||||
Sbjct: 22 tgacagaagatagagagcacagatg 46
>48537_gma-miR157c:pmrd
Length = 84
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 45 gcatctcactcctttgtgctctctatgcttctgtca 80
||||||||||||||||||||||||| |||||||||
Sbjct: 36 gcatctcactcctttgtgctctctagtcttctgtca 1
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1 tgacagaagatagagagcacagatg 25
|||||||||||||||||||| ||||
Sbjct: 83 tgacagaagatagagagcactgatg 59
>48532_gma-miR156e:pmrd
Length = 124
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 45 gcatctcactcctttgtgctctctatgcttctgtca 80
||||||||||||||||||||||||| |||||||||
Sbjct: 69 gcatctcactcctttgtgctctctagtcttctgtca 104
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatg 25
|||||||||||||||||||| ||||
Sbjct: 22 tgacagaagatagagagcactgatg 46
>48642_han-miR157a:pmrd
Length = 86
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 50 tcactcctttgtgctctctatgcttctgtca 80
||||||||| |||||||||||||||||||||
Sbjct: 55 tcactccttcgtgctctctatgcttctgtca 85
>54661_stu-miR157a:pmrd
Length = 91
Score = 50.1 bits (25), Expect = 2e-07
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 45 gcatctcactcc-tttgtgctctctatgcttctgtca 80
|||||||||| | ||||||||||||||||||||||||
Sbjct: 54 gcatctcacttcatttgtgctctctatgcttctgtca 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>48790_nta-miR157:pmrd
Length = 131
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatg 25
|||||||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcacagatg 26
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 57 tttgtgctctctatgcttctgtca 80
||||||||||||||||||| ||||
Sbjct: 107 tttgtgctctctatgcttccgtca 130
>48697_mtr-miR156h:pmrd
Length = 94
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatg 25
|||||||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcacagatg 31
Score = 48.1 bits (24), Expect = 9e-07
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 45 gcatctcactcctttgtgctctctatgcttctgtca 80
|||||||| ||||||||||||| ||| |||||||||
Sbjct: 54 gcatctcattcctttgtgctctttattcttctgtca 89
>46925_ath-miR157b:pmrd
Length = 132
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatg 25
|||||||||||||||||||||||||
Sbjct: 20 tgacagaagatagagagcacagatg 44
Score = 50.1 bits (25), Expect = 2e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 44 tgcatctcactcctttgtgctctctatgcttctgtca 80
||||||| |||||||||||||||||| |||||||||
Sbjct: 72 tgcatcttactcctttgtgctctctagccttctgtca 108
>46924_ath-miR157a:pmrd
Length = 98
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatg 25
|||||||||||||||||||||||||
Sbjct: 5 tgacagaagatagagagcacagatg 29
Score = 50.1 bits (25), Expect = 2e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 44 tgcatctcactcctttgtgctctctatgcttctgtca 80
||||||| |||||||||||||||||| |||||||||
Sbjct: 57 tgcatcttactcctttgtgctctctagccttctgtca 93
>54532_sly-miR156a:pmrd
Length = 100
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 57 tttgtgctctctatgcttctgtca 80
||||||||||||||||||||||||
Sbjct: 76 tttgtgctctctatgcttctgtca 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>54570_smo-miR156b:pmrd
Length = 112
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacaga 23
|||||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcacaga 34
>46927_ath-miR157d:pmrd
Length = 221
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 54 tcctttgtgctctctatgcttctgtca 80
|||| ||||||||||||||||||||||
Sbjct: 167 tcctatgtgctctctatgcttctgtca 193
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 24 tgacagaagatagagagcac 43
>46926_ath-miR157c:pmrd
Length = 217
Score = 44.1 bits (22), Expect = 1e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 44 tgcatctc-actcctttgtgctctctatgcttctgtca 80
|||||||| |||| |||||||||||||| |||||||||
Sbjct: 151 tgcatctctactcttttgtgctctctatacttctgtca 188
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 25 tgacagaagatagagagcac 44
>54771_vvi-miR156f:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcaca 32
>51552_pta-miR156b:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcaca 23
>51551_pta-miR156a:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcaca 23
>48696_mtr-miR156f:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcaca 27
>48675_lja-miR157a:pmrd
Length = 58
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcaca 22
>48530_gma-miR156c:pmrd
Length = 185
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 147 tgacagaagatagagagcaca 167
>48384_bol-miR157a:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 52 actcctttgtgctctctatgcttctgtca 80
|||| |||||||||||||| |||||||||
Sbjct: 73 actcttttgtgctctctatacttctgtca 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcac 26
>48338_bna-miR156c:pmrd
Length = 155
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 52 actcctttgtgctctctatgcttctgtca 80
|||| |||||||||||||| |||||||||
Sbjct: 109 actcttttgtgctctctatacttctgtca 137
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 19 tgacagaagatagagagcac 38
>54534_sly-miR156c:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>54533_sly-miR156b:pmrd
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>48393_bra-miR157a:pmrd
Length = 149
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 15 tgacagaagatagagagcac 34
>48337_bna-miR156b:pmrd
Length = 208
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 26 tgacagaagatagagagcac 45
>54537_sly-miR157c:pmrd
Length = 123
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 104 tgacagaagatagagagca 122
>54536_sly-miR157b:pmrd
Length = 430
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 2 tgacagaagatagagagca 20
>54535_sly-miR157a:pmrd
Length = 53
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 2 tgacagaagatagagagca 20
>51323_pco-miR157:pmrd
Length = 184
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 2 tgacagaagatagagagca 20
>48698_mtr-miR157:pmrd
Length = 111
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 54 tcctttgtgctctctatgcttctgtca 80
|||||||||||||||| |||||||||
Sbjct: 84 tcctttgtgctctctagacttctgtca 110
>48684_lsa-miR157:pmrd
Length = 357
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgga 27
|||||||||| ||||||||||| ||||
Sbjct: 2 tgacagaagagagagagcacagttgga 28
>48683_lsa-miR156:pmrd
Length = 355
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgga 27
|||||||||| ||||||||||| ||||
Sbjct: 1 tgacagaagagagagagcacagttgga 27
>48677_lja-miR157c:pmrd
Length = 460
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 2 tgacagaagatagagagca 20
>48670_ini-miR157b:pmrd
Length = 183
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 2 tgacagaagatagagagca 20
>48669_ini-miR157a:pmrd
Length = 126
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 2 tgacagaagatagagagca 20
>48668_iba-miR157:pmrd
Length = 283
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 2 tgacagaagatagagagca 20
>48305_bdi-miR156:pmrd
Length = 147
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgga 27
|||||||||| ||||||||||| ||||
Sbjct: 101 tgacagaagagagagagcacagctgga 127
