miRNEST 2.0, an integrative microRNA resource :: BLAST
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 97.6 bits (49), Expect = 1e-21
Identities = 93/104 (89%), Gaps = 4/104 (3%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga-ctaattcg-ctgacacagccacgtggctctttttc--tt 56
|||||||||||||||||||| | |||||| ||||||||||| |||| || || | ||
Sbjct: 13 tcgcttggtgcaggtcgggaaccaattcggctgacacagcctcgtgacttttaaaccttt 72
Query: 57 attggtttgtgagcagggattggatcccgccttgcatcaactga 100
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 attggtttgtgagcagggattggatcccgccttgcatcaactga 116
>46959_ath-miR168m:pmrd
Length = 104
Score = 97.6 bits (49), Expect = 1e-21
Identities = 93/104 (89%), Gaps = 4/104 (3%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga-ctaattcg-ctgacacagccacgtggctctttttc--tt 56
|||||||||||||||||||| | |||||| ||||||||||| |||| || || | ||
Sbjct: 1 tcgcttggtgcaggtcgggaaccaattcggctgacacagcctcgtgacttttaaaccttt 60
Query: 57 attggtttgtgagcagggattggatcccgccttgcatcaactga 100
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attggtttgtgagcagggattggatcccgccttgcatcaactga 104
>46957_ath-miR168a:pmrd
Length = 138
Score = 97.6 bits (49), Expect = 1e-21
Identities = 93/104 (89%), Gaps = 4/104 (3%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga-ctaattcg-ctgacacagccacgtggctctttttc--tt 56
|||||||||||||||||||| | |||||| ||||||||||| |||| || || | ||
Sbjct: 18 tcgcttggtgcaggtcgggaaccaattcggctgacacagcctcgtgacttttaaaccttt 77
Query: 57 attggtttgtgagcagggattggatcccgccttgcatcaactga 100
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 attggtttgtgagcagggattggatcccgccttgcatcaactga 121
>48349_bna-miR168:pmrd
Length = 133
Score = 67.9 bits (34), Expect = 1e-12
Identities = 83/97 (85%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggg-actaattcgctgacacagccacgtggctctttttcttatt 59
||||||||||||||||||| ||| ||| |||||||| ||||||||| |||| | ||
Sbjct: 18 tcgcttggtgcaggtcgggaactgattggctgacaccgccacgtgg--ctttccatggtt 75
Query: 60 ggtttgtgagcagggattggatcccgccttgcatcaa 96
|| |||||||||||||| ||||||||||||| |||||
Sbjct: 76 ggcttgtgagcagggatcggatcccgccttgtatcaa 112
>54388_rco-miR168:pmrd
Length = 156
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 attggatcccgccttgcatcaactga 100
||||||||||||||||||||||||||
Sbjct: 112 attggatcccgccttgcatcaactga 137
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 19 tcgcttggtgcaggtcggga 38
>54375_pts-miR168b:pmrd
Length = 140
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 attggatcccgccttgcatcaactga 100
||||||||||||||||||||||||||
Sbjct: 115 attggatcccgccttgcatcaactga 140
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>54374_pts-miR168a:pmrd
Length = 118
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 attggatcccgccttgcatcaactga 100
||||||||||||||||||||||||||
Sbjct: 93 attggatcccgccttgcatcaactga 118
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>54366_ptr-miR168:pmrd
Length = 118
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 attggatcccgccttgcatcaactga 100
||||||||||||||||||||||||||
Sbjct: 93 attggatcccgccttgcatcaactga 118
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>51651_ptc-miR168b:pmrd
Length = 136
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 attggatcccgccttgcatcaactga 100
||||||||||||||||||||||||||
Sbjct: 103 attggatcccgccttgcatcaactga 128
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcggga 30
>51650_ptc-miR168a:pmrd
Length = 160
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 attggatcccgccttgcatcaactga 100
||||||||||||||||||||||||||
Sbjct: 127 attggatcccgccttgcatcaactga 152
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcggga 30
>48560_gma-miR168:pmrd
Length = 125
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 attggatcccgccttgcatcaactga 100
||||||||||||||||||||||||||
Sbjct: 81 attggatcccgccttgcatcaactga 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 19 tcgcttggtgcaggtcggga 38
>54802_vvi-miR168:pmrd
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 gatcccgccttgcatcaactga 100
||||||||||||||||||||||
Sbjct: 99 gatcccgccttgcatcaactga 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcggga 30
>54665_stu-miR168:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggac 21
|||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggac 21
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 76 ttggatcccgccttgcatcaactga 100
|||| ||||||||||||||||||||
Sbjct: 109 ttgggtcccgccttgcatcaactga 133
>54546_sly-miR168:pmrd
Length = 145
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggac 21
|||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggac 21
>46958_ath-miR168b:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 7e-05
Identities = 40/45 (88%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggg-actaattcgctgacacagccacgtg 44
||||||||||||||||||| ||| ||| |||||||| | ||||||
Sbjct: 19 tcgcttggtgcaggtcgggaactgattggctgacaccgacacgtg 63
>48649_hte-miR168:pmrd
Length = 140
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
