miRNEST 2.0, an integrative microRNA resource :: BLAST
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 75.8 bits (38), Expect = 1e-14
Identities = 73/82 (89%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 60
|||||||||||||||||||| ||||||||| || ||||| ||| ||||||| |||||||
Sbjct: 6 tggagctccttgaagtccaatagaggttcttgc-tgggtagattaagctgctaagctatg 64
Query: 61 gatcccacagtcctatgtatca 82
||| |||||||||||| |||||
Sbjct: 65 gat-ccacagtcctatctatca 85
>51604_ptc-miR159c:pmrd
Length = 183
Score = 75.8 bits (38), Expect = 1e-14
Identities = 73/82 (89%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 60
|||||||||||||||||||| ||||||||| || ||||| ||| ||||||| |||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgc-tgggtagattaagctgctaagctatg 69
Query: 61 gatcccacagtcctatgtatca 82
||| |||||||||||| |||||
Sbjct: 70 gat-ccacagtcctatctatca 90
>51602_ptc-miR159a:pmrd
Length = 183
Score = 75.8 bits (38), Expect = 1e-14
Identities = 73/82 (89%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 60
|||||||||||||||||||| ||||||||| || ||||| ||| ||||||| |||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgc-tgggtagattaagctgctaagctatg 69
Query: 61 gatcccacagtcctatgtatca 82
||| |||||||||||| |||||
Sbjct: 70 gat-ccacagtcctatctatca 90
>54777_vvi-miR159c:pmrd
Length = 190
Score = 63.9 bits (32), Expect = 4e-11
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 60
|||||||||||||||||||| ||||| ||| | ||||| ||||||||||||| ||||
Sbjct: 9 tggagctccttgaagtccaatagagggtcttact-gggtagattgagctgctgacttatg 67
Query: 61 gatcccacagtcctat 76
|||||||||| |||||
Sbjct: 68 gatcccacagccctat 83
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 114 gataggcttgtggcttgcatat 135
||||||||||||||||||||||
Sbjct: 104 gataggcttgtggcttgcatat 125
>48539_gma-miR159a:pmrd
Length = 214
Score = 61.9 bits (31), Expect = 2e-10
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 60
|||||||||||||||||||| |||| ||| | |||| |||||||||||| |||||||
Sbjct: 21 tggagctccttgaagtccaattgaggatcttact-gggtgaattgagctgcttagctatg 79
Query: 61 gatcccacagt 71
|||||||||||
Sbjct: 80 gatcccacagt 90
>51603_ptc-miR159b:pmrd
Length = 187
Score = 56.0 bits (28), Expect = 1e-08
Identities = 65/76 (85%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 60
|||||||||||||||||||| ||| | || || ||||| || ||||||||||||||||
Sbjct: 11 tggagctccttgaagtccaatagaagctcctgct-gggtagatcgagctgctgagctatg 69
Query: 61 gatcccacagtcctat 76
||||||||| |||||
Sbjct: 70 aatcccacagccctat 85
>54378_pvu-miR159:pmrd
Length = 174
Score = 54.0 bits (27), Expect = 4e-08
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 60
|||||||||||||||||||| |||| ||| | |||| ||||||||||| |||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttact-gggtggattgagctgcttagctatg 60
Query: 61 gatcccacagt 71
|||||||||||
Sbjct: 61 gatcccacagt 71
>54377_pvu-miR159:pmrd
Length = 174
Score = 54.0 bits (27), Expect = 4e-08
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 60
|||||||||||||||||||| |||| ||| | |||| ||||||||||| |||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttact-gggtggattgagctgcttagctatg 60
Query: 61 gatcccacagt 71
|||||||||||
Sbjct: 61 gatcccacagt 71
>54540_sly-miR159:pmrd
Length = 177
Score = 48.1 bits (24), Expect = 3e-06
Identities = 64/76 (84%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 60
|||||||||||||||||||| | | |||| || || |||||||||||||||| |||||
Sbjct: 1 tggagctccttgaagtccaacaaaaaatctaaca-ggttaaattgagctgctgacctatg 59
Query: 61 gatcccacagtcctat 76
||| || ||| |||||
Sbjct: 60 gattcctcagccctat 75
>51338_pgl-miR159:pmrd
Length = 226
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 114 gataggcttgtggcttgcat 133
||||||||||||||||||||
Sbjct: 150 gataggcttgtggcttgcat 169
