miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48472_csi-miR156b:pmrd
Length = 515
Score = 724 bits (365), Expect = 0.0
Identities = 365/365 (100%)
Strand = Plus / Plus
Query: 33 aacaacaaaccaacattctagtcttgagaataagttcattgcagcaggattttcaagaag 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 aacaacaaaccaacattctagtcttgagaataagttcattgcagcaggattttcaagaag 210
Query: 93 agaatccagaattattatatggaaagataacaacctcttagtgacttactactcccaatg 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 agaatccagaattattatatggaaagataacaacctcttagtgacttactactcccaatg 270
Query: 153 aaagggaattgtttgaggggtatcactggctgcggacccatcatatcccaaatgaaacac 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aaagggaattgtttgaggggtatcactggctgcggacccatcatatcccaaatgaaacac 330
Query: 213 tccagggcaatgaacattatcatcctgatcactggataccagaacagattccatgggctc 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tccagggcaatgaacattatcatcctgatcactggataccagaacagattccatgggctc 390
Query: 273 tacactgtgattatgcaggcttgtgcccaaggaccgcaccagtggcattgaactaggcgg 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tacactgtgattatgcaggcttgtgcccaaggaccgcaccagtggcattgaactaggcgg 450
Query: 333 catcatttggctcaaactgataccagatgtctgtgttgttggtgatgacagaagagagag 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 catcatttggctcaaactgataccagatgtctgtgttgttggtgatgacagaagagagag 510
Query: 393 agcac 397
|||||
Sbjct: 511 agcac 515
>54396_sbi-miR156d:pmrd
Length = 125
Score = 52.0 bits (26), Expect = 3e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 374 gtgatgacagaagagagagagcacaa 399
||||||||||||||||||||||||||
Sbjct: 17 gtgatgacagaagagagagagcacaa 42
>54371_pts-miR156c:pmrd
Length = 85
Score = 52.0 bits (26), Expect = 3e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcacaatctgagtc 407
|||||||||||||||||||||||| |||||
Sbjct: 1 tgacagaagagagagagcacaatccgagtc 30
>48811_osa-miR156k:pmrd
Length = 106
Score = 52.0 bits (26), Expect = 3e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 374 gtgatgacagaagagagagagcacaa 399
||||||||||||||||||||||||||
Sbjct: 7 gtgatgacagaagagagagagcacaa 32
>46920_ath-miR156p:pmrd
Length = 47
Score = 52.0 bits (26), Expect = 3e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcacaatctgagtc 407
|||||||||||||||||||||||| |||||
Sbjct: 1 tgacagaagagagagagcacaatcagagtc 30
>54920_zma-miR156j:pmrd
Length = 125
Score = 48.1 bits (24), Expect = 5e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 376 gatgacagaagagagagagcacaa 399
||||||||||||||||||||||||
Sbjct: 19 gatgacagaagagagagagcacaa 42
>54657_stu-miR156b:pmrd
Length = 382
Score = 44.1 bits (22), Expect = 9e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 376 gatgacagaagagagagagcac 397
||||||||||||||||||||||
Sbjct: 361 gatgacagaagagagagagcac 382
>54652_spr-miR156:pmrd
Length = 125
Score = 44.1 bits (22), Expect = 9e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcacaatctgagtc 407
||||||||||||||||||||| || |||||
Sbjct: 1 tgacagaagagagagagcacattccgagtc 30
>54626_sof-miR156h:pmrd
Length = 343
Score = 44.1 bits (22), Expect = 9e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 376 gatgacagaagagagagagcac 397
||||||||||||||||||||||
Sbjct: 322 gatgacagaagagagagagcac 343
>54625_sof-miR156g:pmrd
Length = 403
Score = 44.1 bits (22), Expect = 9e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcacaatctgagtc 407
||||||||||||||||||||| || |||||
Sbjct: 1 tgacagaagagagagagcacactcagagtc 30
>54624_sof-miR156f:pmrd
Length = 46
Score = 44.1 bits (22), Expect = 9e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcacaa 399
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacaa 22
>51340_ppd-miR156:pmrd
Length = 146
Score = 44.1 bits (22), Expect = 9e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 376 gatgacagaagagagagagcac 397
||||||||||||||||||||||
Sbjct: 125 gatgacagaagagagagagcac 146
>48676_lja-miR157b:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 9e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcacaa 399
||||||||||||||||||||||
Sbjct: 2 tgacagaagagagagagcacaa 23
>48675_lja-miR157a:pmrd
Length = 58
Score = 44.1 bits (22), Expect = 9e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcacaatctgagtc 407
|||||||||| ||||||||||| |||||||
Sbjct: 2 tgacagaagatagagagcacaacctgagtc 31
>48674_lja-miR156:pmrd
Length = 47
Score = 44.1 bits (22), Expect = 9e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcacaa 399
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacaa 22
>48654_hvv-miR156c:pmrd
Length = 178
Score = 44.1 bits (22), Expect = 9e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcacaatctgagtc 407
||||||||||||||||||||| || |||||
Sbjct: 1 tgacagaagagagagagcacagtcggagtc 30
>48650_hvs-miR156:pmrd
Length = 178
Score = 44.1 bits (22), Expect = 9e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcacaatctgagtc 407
||||||||||||||||||||| || |||||
Sbjct: 1 tgacagaagagagagagcacagtcggagtc 30
>48536_gma-miR156i:pmrd
Length = 117
Score = 44.1 bits (22), Expect = 9e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcacaa 399
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacaa 22
>48535_gma-miR156h:pmrd
Length = 147
Score = 44.1 bits (22), Expect = 9e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 376 gatgacagaagagagagagcac 397
||||||||||||||||||||||
Sbjct: 126 gatgacagaagagagagagcac 147
>48534_gma-miR156g:pmrd
Length = 209
Score = 44.1 bits (22), Expect = 9e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 376 gatgacagaagagagagagcac 397
||||||||||||||||||||||
Sbjct: 188 gatgacagaagagagagagcac 209
>48530_gma-miR156c:pmrd
Length = 185
Score = 44.1 bits (22), Expect = 9e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcacaatctgagtc 407
|||||||||| ||||||||||| |||||||
Sbjct: 147 tgacagaagatagagagcacaacctgagtc 176
>48529_gma-miR156b:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 9e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcacaa 399
||||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaa 42
>48470_cru-miR156:pmrd
Length = 67
Score = 44.1 bits (22), Expect = 9e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 376 gatgacagaagagagagagcac 397
||||||||||||||||||||||
Sbjct: 46 gatgacagaagagagagagcac 67
>48426_cpt-miR156b:pmrd
Length = 185
Score = 44.1 bits (22), Expect = 9e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 376 gatgacagaagagagagagcac 397
||||||||||||||||||||||
Sbjct: 9 gatgacagaagagagagagcac 30
>46921_ath-miR156q:pmrd
Length = 59
Score = 44.1 bits (22), Expect = 9e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcacaatctgagtc 407
||||||||||||||||||||| | ||||||
Sbjct: 1 tgacagaagagagagagcacagtttgagtc 30
>46919_ath-miR156o:pmrd
Length = 245
Score = 44.1 bits (22), Expect = 9e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 376 gatgacagaagagagagagcac 397
||||||||||||||||||||||
Sbjct: 224 gatgacagaagagagagagcac 245
>46903_aqc-miR529:pmrd
Length = 125
Score = 44.1 bits (22), Expect = 9e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcacaa 399
||||||||||||||||||||||
Sbjct: 18 tgacagaagagagagagcacaa 39
>46857_ahy-miR157k:pmrd
Length = 139
Score = 44.1 bits (22), Expect = 9e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcacaa 399
||||||||||||||||||||||
Sbjct: 22 tgacagaagagagagagcacaa 43
>54621_sof-miR156c:pmrd
Length = 68
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcaca 398
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
>54531_sin-miR157:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcaca 398
|||||||||||||||||||||
Sbjct: 2 tgacagaagagagagagcaca 22
>54530_sin-miR156:pmrd
Length = 81
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcaca 398
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
>48689_mdo-miR156b:pmrd
Length = 79
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcaca 398
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
>48684_lsa-miR157:pmrd
Length = 357
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcaca 398
|||||||||||||||||||||
Sbjct: 2 tgacagaagagagagagcaca 22
>48683_lsa-miR156:pmrd
Length = 355
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcaca 398
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
>48655_hvv-miR156d:pmrd
Length = 203
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcaca 398
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
>48533_gma-miR156f:pmrd
Length = 267
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcaca 398
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
>48492_ghr-miR157:pmrd
Length = 152
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 377 atgacagaagagagagagcac 397
|||||||||||||||||||||
Sbjct: 1 atgacagaagagagagagcac 21
>48305_bdi-miR156:pmrd
Length = 147
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 378 tgacagaagagagagagcaca 398
|||||||||||||||||||||
Sbjct: 101 tgacagaagagagagagcaca 121
